RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPG1YBR079C SGS1P35187 1447 aa7.09□□□□□ -1.27
RPG1YBR079C SSN2P38931 1420 aa6.87□□□□□ -1.31
RPG1YBR079C SPA2P23201 1466 aaKnown RBP6.86□□□□□ -1.31
RPG1YBR079C INO80P53115 1489 aa6.77□□□□□ -1.33
RPG1YBR079C DRS1P32892 752 aaKnown RBP6.75□□□□□ -1.33
RPG1YBR079C MTC1P47018 478 aaKnown RBP6.73□□□□□ -1.33
RPG1YBR079C TCB3Q03640 1545 aaKnown RBP6.63□□□□□ -1.35
RPG1YBR079C TY1B-DR4Q07793 1604 aa6.5□□□□□ -1.37
RPG1YBR079C HSL1P34244 1518 aa6.5□□□□□ -1.37
RPG1YBR079C SPT6P23615 1451 aaKnown RBP6.49□□□□□ -1.37
RPG1YBR079C XRN1P22147 1528 aaKnown RBP6.43□□□□□ -1.38
RPG1YBR079C HIR3P47171 1648 aa6.4□□□□□ -1.39
RPG1YBR079C TAF2P23255 1407 aa6.37□□□□□ -1.39
RPG1YBR079C SWR1Q05471 1514 aa6.32□□□□□ -1.4
RPG1YBR079C REV3P14284 1504 aa6.31□□□□□ -1.4
RPG1YBR079C MON2P48563 1636 aaPredicted RBP6.3□□□□□ -1.4
RPG1YBR079C SKI3P17883 1432 aaKnown RBP6.3□□□□□ -1.4
RPG1YBR079C MMS22Q06164 1454 aa6.26□□□□□ -1.41
RPG1YBR079C RSE1Q04693 1361 aaKnown RBP6.25□□□□□ -1.41
RPG1YBR079C SAS10Q12136 610 aaPredicted RBP6.25□□□□□ -1.41
RPG1YBR079C THO2P53552 1597 aaKnown RBP6.23□□□□□ -1.41
RPG1YBR079C SSK2P53599 1579 aa6.22□□□□□ -1.41
RPG1YBR079C SIN3P22579 1536 aa6.21□□□□□ -1.42
RPG1YBR079C CHD1P32657 1468 aa6.18□□□□□ -1.42
RPG1YBR079C STU1P38198 1513 aa6.18□□□□□ -1.42
RPG1YBR079C ESP1Q03018 1630 aa6.14□□□□□ -1.43
RPG1YBR079C MYO2P19524 1574 aaKnown RBP6.13□□□□□ -1.43
RPG1YBR079C BPT1P14772 1559 aa6.13□□□□□ -1.43
RPG1YBR079C POL1P13382 1468 aa6.13□□□□□ -1.43
RPG1YBR079C YTA7P40340 1379 aa6.11□□□□□ -1.43
RPG1YBR079C ECM5Q03214 1411 aa6.11□□□□□ -1.43
RPG1YBR079C BUD4P47136 1447 aa6.1□□□□□ -1.43
RPG1YBR079C DNA2P38859 1522 aa6.09□□□□□ -1.43
RPG1YBR079C TRM732Q03496 1420 aa6.07□□□□□ -1.44
RPG1YBR079C YPK9Q12697 1472 aa6.06□□□□□ -1.44
RPG1YBR079C SCC2Q04002 1493 aa6.06□□□□□ -1.44
RPG1YBR079C ATG2P53855 1592 aa6.06□□□□□ -1.44
RPG1YBR079C UFD4P33202 1483 aa6.05□□□□□ -1.44
RPG1YBR079C RKR1Q04781 1562 aa6.03□□□□□ -1.44
RPG1YBR079C IKI3Q06706 1349 aaKnown RBP6.03□□□□□ -1.44
RPG1YBR079C NSR1P27476 414 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
RPG1YBR079C IFH1P39520 1085 aa6.02□□□□□ -1.45
RPG1YBR079C KOG1P38873 1557 aa6.02□□□□□ -1.45
RPG1YBR079C YOR1P53049 1477 aa6.02□□□□□ -1.45
RPG1YBR079C STH1P32597 1359 aa6.01□□□□□ -1.45
RPG1YBR079C SSM4P40318 1319 aa6□□□□□ -1.45
RPG1YBR079C MYO4P32492 1471 aa5.98□□□□□ -1.45
RPG1YBR079C MDS3P53094 1487 aa5.97□□□□□ -1.45
RPG1YBR079C TAF7Q05021 590 aa5.97□□□□□ -1.45
RPG1YBR079C RPO31P04051 1460 aa5.96□□□□□ -1.45
RPG1YBR079C TOP2P06786 1428 aaKnown RBP5.96□□□□□ -1.45
RPG1YBR079C SNQ2P32568 1501 aaKnown RBP5.96□□□□□ -1.46
RPG1YBR079C RQC2Q12532 1038 aaKnown RBP5.96□□□□□ -1.46
RPG1YBR079C PEP1P32319 1579 aa5.96□□□□□ -1.46
RPG1YBR079C SMC4Q12267 1418 aa5.95□□□□□ -1.46
RPG1YBR079C NOP2P40991 618 aaKnown RBP5.95□□□□□ -1.46
RPG1YBR079C YCF1P39109 1515 aaKnown RBP5.93□□□□□ -1.46
RPG1YBR079C SPP41P38904 1435 aa5.92□□□□□ -1.46
RPG1YBR079C GEA1P47102 1408 aaPredicted RBP5.91□□□□□ -1.46
RPG1YBR079C RTT106P40161 455 aa5.9□□□□□ -1.46
RPG1YBR079C PDR15Q04182 1529 aaKnown RBP5.9□□□□□ -1.47
RPG1YBR079C PAN1P32521 1480 aa5.88□□□□□ -1.47
RPG1YBR079C TSC11P40061 1430 aa5.87□□□□□ -1.47
RPG1YBR079C POL5P39985 1022 aaKnown RBP5.87□□□□□ -1.47
RPG1YBR079C NUP170P38181 1502 aa5.86□□□□□ -1.47
RPG1YBR079C TY2B-LR1P0C2J3 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-FP0CX63 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-GR2P0CX64 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-CP25384 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-DR2Q03494 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY1B-DR1Q03855 1755 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-DR3Q07791 1770 aaKnown RBP5.85□□□□□ -1.47
RPG1YBR079C TY2B-OR1Q12113 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-DR1Q12472 1770 aa5.85□□□□□ -1.47
RPG1YBR079C TY2B-OR2Q12501 1770 aa5.85□□□□□ -1.47
RPG1YBR079C MLP2P40457 1679 aa5.85□□□□□ -1.47
RPG1YBR079C TY1B-DR3Q99231 1755 aa5.85□□□□□ -1.47
RPG1YBR079C ULS1Q08562 1619 aa5.82□□□□□ -1.48
RPG1YBR079C BFR2Q06631 534 aaKnown RBP5.81□□□□□ -1.48
RPG1YBR079C SPT7P35177 1332 aa5.81□□□□□ -1.48
RPG1YBR079C TY2B-BQ12491 1770 aa5.8□□□□□ -1.48
RPG1YBR079C ENP1P38333 483 aaKnown RBP5.8□□□□□ -1.48
RPG1YBR079C TY3B-GQ99315 1547 aa5.8□□□□□ -1.48
RPG1YBR079C VPS15P22219 1454 aa5.79□□□□□ -1.48
RPG1YBR079C AVT3P36062 692 aa5.79□□□□□ -1.48
RPG1YBR079C VTH1P40438 1549 aa5.78□□□□□ -1.48
RPG1YBR079C VTH2P40890 1549 aa5.78□□□□□ -1.48
RPG1YBR079C LEU3P08638 886 aa5.78□□□□□ -1.48
RPG1YBR079C SNT2P53127 1403 aa5.75□□□□□ -1.49
RPG1YBR079C CKB1P43639 278 aa5.75□□□□□ -1.49
RPG1YBR079C ORC1P54784 914 aaPredicted RBP5.75□□□□□ -1.49
RPG1YBR079C DIP2Q12220 943 aaPredicted RBP5.75□□□□□ -1.49
RPG1YBR079C TY1B-HO13535 1793 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-DR5P0C2I2 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-DR6P0C2I3 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-LR2P0C2I5 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-LR3P0C2I6 1755 aaKnown RBP5.74□□□□□ -1.49
RPG1YBR079C TY1B-PR1P0C2I9 1755 aaKnown RBP5.74□□□□□ -1.49
RPG1YBR079C TY1B-PR2P0C2J0 1756 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-PR3P0C2J1 1755 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms