RNA–Protein interactions for RNA: YAL039C

CYC3, Transcript of Cytochrome c heme lyase (holocytochrome c synthase), yeastyeast

Gene CYC3, Length 810 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CYC3YAL039C INO80P53115 1489 aa16.42■□□□□ 0.22
CYC3YAL039C MON2P48563 1636 aaPredicted RBP16.36■□□□□ 0.21
CYC3YAL039C TCB3Q03640 1545 aaKnown RBP15.86■□□□□ 0.13
CYC3YAL039C SGS1P35187 1447 aa15.84■□□□□ 0.13
CYC3YAL039C SWR1Q05471 1514 aa15.71■□□□□ 0.11
CYC3YAL039C TY1B-DR4Q07793 1604 aa15.66■□□□□ 0.1
CYC3YAL039C DNA2P38859 1522 aa15.6■□□□□ 0.09
CYC3YAL039C KOG1P38873 1557 aa15.45■□□□□ 0.06
CYC3YAL039C SPT6P23615 1451 aaKnown RBP15.24■□□□□ 0.03
CYC3YAL039C HSL1P34244 1518 aa15.22■□□□□ 0.03
CYC3YAL039C SPA2P23201 1466 aaKnown RBP15.15■□□□□ 0.02
CYC3YAL039C RSE1Q04693 1361 aaKnown RBP14.95□□□□□ -0.02
CYC3YAL039C HIR3P47171 1648 aa14.91□□□□□ -0.02
CYC3YAL039C ECM5Q03214 1411 aa14.82□□□□□ -0.04
CYC3YAL039C BUD4P47136 1447 aa14.75□□□□□ -0.05
CYC3YAL039C THO2P53552 1597 aaKnown RBP14.72□□□□□ -0.05
CYC3YAL039C XRN1P22147 1528 aaKnown RBP14.71□□□□□ -0.05
CYC3YAL039C SSN2P38931 1420 aa14.69□□□□□ -0.06
CYC3YAL039C MDS3P53094 1487 aa14.52□□□□□ -0.08
CYC3YAL039C REV3P14284 1504 aa14.44□□□□□ -0.1
CYC3YAL039C PEP1P32319 1579 aa14.39□□□□□ -0.11
CYC3YAL039C MTC1P47018 478 aaKnown RBP14.37□□□□□ -0.11
CYC3YAL039C ATG2P53855 1592 aa14.34□□□□□ -0.11
CYC3YAL039C DRS1P32892 752 aaKnown RBP14.32□□□□□ -0.12
CYC3YAL039C TAF2P23255 1407 aa14.3□□□□□ -0.12
CYC3YAL039C SIN3P22579 1536 aa14.29□□□□□ -0.12
CYC3YAL039C SKI3P17883 1432 aaKnown RBP14.25□□□□□ -0.13
CYC3YAL039C SSK2P53599 1579 aa14.16□□□□□ -0.14
CYC3YAL039C BPT1P14772 1559 aa14.14□□□□□ -0.15
CYC3YAL039C ESP1Q03018 1630 aa14.06□□□□□ -0.16
CYC3YAL039C MYO2P19524 1574 aaKnown RBP13.96□□□□□ -0.18
CYC3YAL039C UFD4P33202 1483 aa13.95□□□□□ -0.18
CYC3YAL039C YPK9Q12697 1472 aa13.95□□□□□ -0.18
CYC3YAL039C YCF1P39109 1515 aaKnown RBP13.9□□□□□ -0.18
CYC3YAL039C SCC2Q04002 1493 aa13.89□□□□□ -0.19
CYC3YAL039C RPO31P04051 1460 aa13.83□□□□□ -0.2
CYC3YAL039C CHD1P32657 1468 aa13.7□□□□□ -0.22
CYC3YAL039C RQC2Q12532 1038 aaKnown RBP13.7□□□□□ -0.22
CYC3YAL039C TOP2P06786 1428 aaKnown RBP13.66□□□□□ -0.22
CYC3YAL039C CDC25P04821 1589 aa13.65□□□□□ -0.22
CYC3YAL039C TY2B-LR1P0C2J3 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-FP0CX63 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-GR2P0CX64 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-CP25384 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-DR2Q03494 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY1B-DR1Q03855 1755 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-DR3Q07791 1770 aaKnown RBP13.6□□□□□ -0.23
CYC3YAL039C TY2B-OR1Q12113 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-DR1Q12472 1770 aa13.6□□□□□ -0.23
CYC3YAL039C TY2B-OR2Q12501 1770 aa13.6□□□□□ -0.23
CYC3YAL039C POL1P13382 1468 aa13.6□□□□□ -0.23
CYC3YAL039C PAN1P32521 1480 aa13.58□□□□□ -0.24
CYC3YAL039C RKR1Q04781 1562 aa13.57□□□□□ -0.24
CYC3YAL039C MET5P47169 1442 aa13.55□□□□□ -0.24
CYC3YAL039C DNF1P32660 1571 aa13.52□□□□□ -0.25
CYC3YAL039C TY1B-BRQ12193 1756 aa13.5□□□□□ -0.25
CYC3YAL039C TY1B-GR3Q12316 1755 aa13.5□□□□□ -0.25
CYC3YAL039C TY1B-ORQ92393 1755 aa13.5□□□□□ -0.25
CYC3YAL039C ESC1Q03661 1658 aaKnown RBP13.5□□□□□ -0.25
CYC3YAL039C MMS22Q06164 1454 aa13.5□□□□□ -0.25
CYC3YAL039C STU1P38198 1513 aa13.49□□□□□ -0.25
CYC3YAL039C SMC4Q12267 1418 aa13.48□□□□□ -0.25
CYC3YAL039C YOR1P53049 1477 aa13.48□□□□□ -0.25
CYC3YAL039C TY2B-BQ12491 1770 aa13.44□□□□□ -0.26
CYC3YAL039C TRM732Q03496 1420 aa13.42□□□□□ -0.26
CYC3YAL039C TY1B-DR3Q99231 1755 aa13.42□□□□□ -0.26
CYC3YAL039C TY1B-HO13535 1793 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-DR5P0C2I2 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-DR6P0C2I3 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-LR2P0C2I5 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-LR3P0C2I6 1755 aaKnown RBP13.41□□□□□ -0.26
CYC3YAL039C TY1B-PR1P0C2I9 1755 aaKnown RBP13.41□□□□□ -0.26
CYC3YAL039C TY1B-PR2P0C2J0 1756 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-PR3P0C2J1 1755 aaKnown RBP13.41□□□□□ -0.26
CYC3YAL039C TY1B-JR1P47098 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-ML2Q03434 1755 aaKnown RBP13.41□□□□□ -0.26
CYC3YAL039C TY1B-ER1Q03612 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-ML1Q04711 1755 aaKnown RBP13.41□□□□□ -0.26
CYC3YAL039C TY1B-GR2Q12269 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-OLQ12273 1755 aa13.41□□□□□ -0.26
CYC3YAL039C TY1B-PLQ12414 1755 aaKnown RBP13.41□□□□□ -0.26
CYC3YAL039C SPP41P38904 1435 aa13.39□□□□□ -0.27
CYC3YAL039C RPA190P10964 1664 aaKnown RBP13.38□□□□□ -0.27
CYC3YAL039C LTE1P07866 1435 aa13.37□□□□□ -0.27
CYC3YAL039C YTA7P40340 1379 aa13.32□□□□□ -0.28
CYC3YAL039C TSC11P40061 1430 aa13.3□□□□□ -0.28
CYC3YAL039C NUP159P40477 1460 aa13.24□□□□□ -0.29
CYC3YAL039C VTH1P40438 1549 aa13.23□□□□□ -0.29
CYC3YAL039C VTH2P40890 1549 aa13.23□□□□□ -0.29
CYC3YAL039C GEA2P39993 1459 aaKnown RBP13.23□□□□□ -0.29
CYC3YAL039C MYO4P32492 1471 aa13.22□□□□□ -0.29
CYC3YAL039C TY1B-JR2P47100 1755 aaKnown RBP13.16□□□□□ -0.3
CYC3YAL039C TY1B-ER2Q03619 1755 aa13.16□□□□□ -0.3
CYC3YAL039C TY1B-MR1Q04214 1755 aa13.16□□□□□ -0.3
CYC3YAL039C TY1B-MR2Q04670 1755 aaKnown RBP13.16□□□□□ -0.3
CYC3YAL039C TY1B-LR1Q12088 1755 aaKnown RBP13.16□□□□□ -0.3
CYC3YAL039C TY1B-NL1Q12112 1755 aa13.16□□□□□ -0.3
CYC3YAL039C TY1B-GR1Q12141 1755 aa13.16□□□□□ -0.3
CYC3YAL039C TY1B-BLQ12490 1755 aa13.16□□□□□ -0.3
CYC3YAL039C STH1P32597 1359 aa13.14□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms