RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W DRS1P32892 752 aaKnown RBP8.7□□□□□ -1.02
SWC3YAL011W TFA1P36100 482 aa8.28□□□□□ -1.08
SWC3YAL011W RQC2Q12532 1038 aaKnown RBP8.08□□□□□ -1.12
SWC3YAL011W BFR2Q06631 534 aaKnown RBP7.98□□□□□ -1.13
SWC3YAL011W TAF7Q05021 590 aa7.87□□□□□ -1.15
SWC3YAL011W SGS1P35187 1447 aa7.78□□□□□ -1.16
SWC3YAL011W MTC1P47018 478 aaKnown RBP7.75□□□□□ -1.17
SWC3YAL011W INO80P53115 1489 aa7.57□□□□□ -1.2
SWC3YAL011W SPA2P23201 1466 aaKnown RBP7.47□□□□□ -1.21
SWC3YAL011W TCB3Q03640 1545 aaKnown RBP7.46□□□□□ -1.21
SWC3YAL011W SSN2P38931 1420 aa7.46□□□□□ -1.22
SWC3YAL011W TY1B-DR4Q07793 1604 aa7.41□□□□□ -1.22
SWC3YAL011W AVT3P36062 692 aa7.32□□□□□ -1.24
SWC3YAL011W MON2P48563 1636 aaPredicted RBP7.3□□□□□ -1.24
SWC3YAL011W HSL1P34244 1518 aa7.27□□□□□ -1.25
SWC3YAL011W SPT6P23615 1451 aaKnown RBP7.25□□□□□ -1.25
SWC3YAL011W SWR1Q05471 1514 aa7.2□□□□□ -1.26
SWC3YAL011W HIR3P47171 1648 aa7.15□□□□□ -1.26
SWC3YAL011W LEO1P38439 464 aa7.15□□□□□ -1.26
SWC3YAL011W DMA1P38823 416 aa7.14□□□□□ -1.27
SWC3YAL011W XRN1P22147 1528 aaKnown RBP7.12□□□□□ -1.27
SWC3YAL011W DIP2Q12220 943 aaPredicted RBP7.08□□□□□ -1.28
SWC3YAL011W REV3P14284 1504 aa7.02□□□□□ -1.29
SWC3YAL011W FAP1P53971 965 aa7.01□□□□□ -1.29
SWC3YAL011W DNA2P38859 1522 aa6.97□□□□□ -1.29
SWC3YAL011W THO2P53552 1597 aaKnown RBP6.97□□□□□ -1.29
SWC3YAL011W TAF2P23255 1407 aa6.95□□□□□ -1.3
SWC3YAL011W SIN3P22579 1536 aa6.95□□□□□ -1.3
SWC3YAL011W KOG1P38873 1557 aa6.94□□□□□ -1.3
SWC3YAL011W SSK2P53599 1579 aa6.93□□□□□ -1.3
SWC3YAL011W ESP1Q03018 1630 aa6.9□□□□□ -1.31
SWC3YAL011W BUD4P47136 1447 aa6.86□□□□□ -1.31
SWC3YAL011W MYO2P19524 1574 aaKnown RBP6.85□□□□□ -1.31
SWC3YAL011W ECM5Q03214 1411 aa6.84□□□□□ -1.31
SWC3YAL011W ATG2P53855 1592 aa6.84□□□□□ -1.31
SWC3YAL011W SKI3P17883 1432 aaKnown RBP6.81□□□□□ -1.32
SWC3YAL011W PEP1P32319 1579 aa6.75□□□□□ -1.33
SWC3YAL011W YPK9Q12697 1472 aa6.75□□□□□ -1.33
SWC3YAL011W STU1P38198 1513 aa6.74□□□□□ -1.33
SWC3YAL011W POL1P13382 1468 aa6.74□□□□□ -1.33
SWC3YAL011W MDS3P53094 1487 aa6.74□□□□□ -1.33
SWC3YAL011W LEU3P08638 886 aa6.73□□□□□ -1.33
SWC3YAL011W CHD1P32657 1468 aa6.71□□□□□ -1.33
SWC3YAL011W MMS22Q06164 1454 aa6.71□□□□□ -1.33
SWC3YAL011W SCC2Q04002 1493 aa6.7□□□□□ -1.34
SWC3YAL011W RKR1Q04781 1562 aa6.69□□□□□ -1.34
SWC3YAL011W BPT1P14772 1559 aa6.68□□□□□ -1.34
SWC3YAL011W YTA7P40340 1379 aa6.66□□□□□ -1.34
SWC3YAL011W RPO31P04051 1460 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-LR1P0C2J3 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-FP0CX63 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-GR2P0CX64 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-CP25384 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-DR2Q03494 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY1B-DR1Q03855 1755 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-DR3Q07791 1770 aaKnown RBP6.65□□□□□ -1.35
SWC3YAL011W TY2B-OR1Q12113 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-DR1Q12472 1770 aa6.65□□□□□ -1.35
SWC3YAL011W TY2B-OR2Q12501 1770 aa6.65□□□□□ -1.35
SWC3YAL011W YOR1P53049 1477 aa6.64□□□□□ -1.35
SWC3YAL011W SAS10Q12136 610 aaPredicted RBP6.64□□□□□ -1.35
SWC3YAL011W UFD4P33202 1483 aa6.64□□□□□ -1.35
SWC3YAL011W PRY3P47033 881 aa6.63□□□□□ -1.35
SWC3YAL011W TY1B-DR3Q99231 1755 aa6.62□□□□□ -1.35
SWC3YAL011W TOP2P06786 1428 aaKnown RBP6.61□□□□□ -1.35
SWC3YAL011W YCF1P39109 1515 aaKnown RBP6.61□□□□□ -1.35
SWC3YAL011W TY2B-BQ12491 1770 aa6.59□□□□□ -1.35
SWC3YAL011W MYO4P32492 1471 aa6.58□□□□□ -1.36
SWC3YAL011W AIM44Q99299 758 aa6.58□□□□□ -1.36
SWC3YAL011W SMC4Q12267 1418 aa6.58□□□□□ -1.36
SWC3YAL011W NAP1P25293 417 aaKnown RBP6.58□□□□□ -1.36
SWC3YAL011W PRI1P10363 409 aa6.56□□□□□ -1.36
SWC3YAL011W TY1B-HO13535 1793 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-DR5P0C2I2 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-DR6P0C2I3 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-LR2P0C2I5 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-LR3P0C2I6 1755 aaKnown RBP6.54□□□□□ -1.36
SWC3YAL011W TY1B-PR1P0C2I9 1755 aaKnown RBP6.54□□□□□ -1.36
SWC3YAL011W TY1B-PR2P0C2J0 1756 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-PR3P0C2J1 1755 aaKnown RBP6.54□□□□□ -1.36
SWC3YAL011W TY1B-JR1P47098 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-ML2Q03434 1755 aaKnown RBP6.54□□□□□ -1.36
SWC3YAL011W TY1B-ER1Q03612 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-ML1Q04711 1755 aaKnown RBP6.54□□□□□ -1.36
SWC3YAL011W TY1B-BRQ12193 1756 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-GR2Q12269 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-OLQ12273 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-GR3Q12316 1755 aa6.54□□□□□ -1.36
SWC3YAL011W TY1B-PLQ12414 1755 aaKnown RBP6.54□□□□□ -1.36
SWC3YAL011W TY1B-ORQ92393 1755 aa6.54□□□□□ -1.36
SWC3YAL011W IFH1P39520 1085 aa6.53□□□□□ -1.36
SWC3YAL011W RSE1Q04693 1361 aaKnown RBP6.53□□□□□ -1.36
SWC3YAL011W MLP2P40457 1679 aa6.52□□□□□ -1.37
SWC3YAL011W SNQ2P32568 1501 aaKnown RBP6.52□□□□□ -1.37
SWC3YAL011W STH1P32597 1359 aa6.51□□□□□ -1.37
SWC3YAL011W AAD16Q02895 342 aa6.49□□□□□ -1.37
SWC3YAL011W TRM732Q03496 1420 aa6.49□□□□□ -1.37
SWC3YAL011W DMA2P53924 522 aa6.48□□□□□ -1.37
SWC3YAL011W SPP41P38904 1435 aa6.47□□□□□ -1.37
SWC3YAL011W PTP3P40048 928 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms