RNA–Protein interactions for RNA: ENST00000641548.1

PPT1-216, Transcript of palmitoyl-protein thioesterase 1, humanhuman

Gene PPT1, Length 507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-216ENST00000641548 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
PPT1-216ENST00000641548 ABCC9O60706 1549 aa29.18■■■□□ 2.26
PPT1-216ENST00000641548 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
PPT1-216ENST00000641548 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
PPT1-216ENST00000641548 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
PPT1-216ENST00000641548 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
PPT1-216ENST00000641548 NACADO15069 1562 aa27.01■■□□□ 1.92
PPT1-216ENST00000641548 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
PPT1-216ENST00000641548 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
PPT1-216ENST00000641548 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
PPT1-216ENST00000641548 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
PPT1-216ENST00000641548 MYO15BQ96JP2 1530 aa26.35■■□□□ 1.81
PPT1-216ENST00000641548 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
PPT1-216ENST00000641548 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
PPT1-216ENST00000641548 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
PPT1-216ENST00000641548 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
PPT1-216ENST00000641548 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
PPT1-216ENST00000641548 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
PPT1-216ENST00000641548 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
PPT1-216ENST00000641548 CUX2O14529 1486 aa25.45■■□□□ 1.66
PPT1-216ENST00000641548 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
PPT1-216ENST00000641548 NCAPD3P42695 1498 aa24.94■■□□□ 1.58
PPT1-216ENST00000641548 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
PPT1-216ENST00000641548 NESP48681 1621 aa24.85■■□□□ 1.57
PPT1-216ENST00000641548 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
PPT1-216ENST00000641548 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
PPT1-216ENST00000641548 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PPT1-216ENST00000641548 SMARCA2P51531 1590 aa24.66■■□□□ 1.54
PPT1-216ENST00000641548 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
PPT1-216ENST00000641548 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
PPT1-216ENST00000641548 KIF21AQ7Z4S6 1674 aa24.52■■□□□ 1.52
PPT1-216ENST00000641548 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
PPT1-216ENST00000641548 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
PPT1-216ENST00000641548 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
PPT1-216ENST00000641548 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
PPT1-216ENST00000641548 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
PPT1-216ENST00000641548 WDR62O43379 1518 aa24.21■■□□□ 1.47
PPT1-216ENST00000641548 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
PPT1-216ENST00000641548 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
PPT1-216ENST00000641548 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
PPT1-216ENST00000641548 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
PPT1-216ENST00000641548 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
PPT1-216ENST00000641548 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
PPT1-216ENST00000641548 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
PPT1-216ENST00000641548 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
PPT1-216ENST00000641548 WIZO95785 1651 aa23.79■■□□□ 1.4
PPT1-216ENST00000641548 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
PPT1-216ENST00000641548 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
PPT1-216ENST00000641548 CFTRP13569 1480 aa23.71■■□□□ 1.39
PPT1-216ENST00000641548 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
PPT1-216ENST00000641548 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
PPT1-216ENST00000641548 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
PPT1-216ENST00000641548 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
PPT1-216ENST00000641548 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
PPT1-216ENST00000641548 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
PPT1-216ENST00000641548 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
PPT1-216ENST00000641548 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
PPT1-216ENST00000641548 CHD1O14646 1710 aa23.43■■□□□ 1.34
PPT1-216ENST00000641548 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
PPT1-216ENST00000641548 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
PPT1-216ENST00000641548 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
PPT1-216ENST00000641548 FBLN2P98095 1184 aa23.29■■□□□ 1.32
PPT1-216ENST00000641548 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.32
PPT1-216ENST00000641548 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
PPT1-216ENST00000641548 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
PPT1-216ENST00000641548 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
PPT1-216ENST00000641548 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.29
PPT1-216ENST00000641548 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
PPT1-216ENST00000641548 POLA1P09884 1462 aaPredicted RBP23.08■■□□□ 1.29
PPT1-216ENST00000641548 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
PPT1-216ENST00000641548 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
PPT1-216ENST00000641548 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
PPT1-216ENST00000641548 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
PPT1-216ENST00000641548 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
PPT1-216ENST00000641548 SOGA1O94964 1423 aa22.94■■□□□ 1.26
PPT1-216ENST00000641548 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
PPT1-216ENST00000641548 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
PPT1-216ENST00000641548 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
PPT1-216ENST00000641548 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
PPT1-216ENST00000641548 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
PPT1-216ENST00000641548 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
PPT1-216ENST00000641548 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
PPT1-216ENST00000641548 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
PPT1-216ENST00000641548 CUX1P39880 1505 aa22.68■■□□□ 1.22
PPT1-216ENST00000641548 KIF13AQ9H1H9 1805 aa22.67■■□□□ 1.22
PPT1-216ENST00000641548 ILDR1Q86SU0 546 aaPredicted RBP22.61■■□□□ 1.21
PPT1-216ENST00000641548 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
PPT1-216ENST00000641548 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
PPT1-216ENST00000641548 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
PPT1-216ENST00000641548 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
PPT1-216ENST00000641548 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
PPT1-216ENST00000641548 NUP160Q12769 1436 aa22.49■■□□□ 1.19
PPT1-216ENST00000641548 KDM4FA0A1W2PPD8 638 aa22.48■■□□□ 1.19
PPT1-216ENST00000641548 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
PPT1-216ENST00000641548 FAM69CQ0P6D2 419 aa22.43■■□□□ 1.18
PPT1-216ENST00000641548 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
PPT1-216ENST00000641548 KDM6BO15054 1643 aa22.37■■□□□ 1.17
PPT1-216ENST00000641548 DIP2BQ9P265 1576 aa22.35■■□□□ 1.17
PPT1-216ENST00000641548 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
PPT1-216ENST00000641548 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms