RNA–Protein interactions for RNA: ENST00000641242.1

AP000553.6-201, humanhuman

BASIC

Gene AP000553.6, Length 118 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.6-201ENST00000641242 NISCHQ9Y2I1 1504 aa8.71□□□□□ -1.01
AP000553.6-201ENST00000641242 CCDC180Q9P1Z9 1646 aa7.77□□□□□ -1.17
AP000553.6-201ENST00000641242 ZCCHC6Q5VYS8 1495 aaKnown RBP7.34□□□□□ -1.23
AP000553.6-201ENST00000641242 ABCC9O60706 1549 aa7.31□□□□□ -1.24
AP000553.6-201ENST00000641242 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
AP000553.6-201ENST00000641242 MYO15BQ96JP2 1530 aa7.26□□□□□ -1.25
AP000553.6-201ENST00000641242 NACADO15069 1562 aa7.21□□□□□ -1.25
AP000553.6-201ENST00000641242 RB1CC1Q8TDY2 1594 aa7.19□□□□□ -1.26
AP000553.6-201ENST00000641242 DCAF8L2P0C7V8 631 aa7.06□□□□□ -1.28
AP000553.6-201ENST00000641242 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
AP000553.6-201ENST00000641242 UNC13AQ9UPW8 1703 aa6.98□□□□□ -1.29
AP000553.6-201ENST00000641242 SHROOM4Q9ULL8 1493 aa6.98□□□□□ -1.29
AP000553.6-201ENST00000641242 BICRAQ9NZM4 1560 aa6.91□□□□□ -1.3
AP000553.6-201ENST00000641242 BAZ1AQ9NRL2 1556 aaPredicted RBP6.78□□□□□ -1.32
AP000553.6-201ENST00000641242 PABPN1Q86U42 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
AP000553.6-201ENST00000641242 SMARCA4P51532 1647 aa6.76□□□□□ -1.33
AP000553.6-201ENST00000641242 EIF4G1Q04637 1599 aaKnown RBP6.74□□□□□ -1.33
AP000553.6-201ENST00000641242 PEG3Q9GZU2 1588 aa6.71□□□□□ -1.34
AP000553.6-201ENST00000641242 CECR2Q9BXF3 1484 aa6.71□□□□□ -1.34
AP000553.6-201ENST00000641242 SMARCA2P51531 1590 aa6.69□□□□□ -1.34
AP000553.6-201ENST00000641242 MROH2BQ7Z745 1585 aa6.69□□□□□ -1.34
AP000553.6-201ENST00000641242 HMGXB3Q12766 1538 aa6.67□□□□□ -1.34
AP000553.6-201ENST00000641242 RSF1Q96T23 1441 aaPredicted RBP6.67□□□□□ -1.34
AP000553.6-201ENST00000641242 CC2D2AQ9P2K1 1620 aa6.65□□□□□ -1.34
AP000553.6-201ENST00000641242 ATAD2BQ9ULI0 1458 aa6.64□□□□□ -1.35
AP000553.6-201ENST00000641242 TOP2AP11388 1531 aaKnown RBP6.64□□□□□ -1.35
AP000553.6-201ENST00000641242 WIZO95785 1651 aa6.63□□□□□ -1.35
AP000553.6-201ENST00000641242 BAZ1BQ9UIG0 1483 aaKnown RBP6.62□□□□□ -1.35
AP000553.6-201ENST00000641242 NCAPD3P42695 1498 aa6.61□□□□□ -1.35
AP000553.6-201ENST00000641242 SUPT5HO00267 1087 aaKnown RBP6.54□□□□□ -1.36
AP000553.6-201ENST00000641242 PRDM2Q13029 1718 aa6.47□□□□□ -1.37
AP000553.6-201ENST00000641242 CCDC88BA6NC98 1476 aa6.47□□□□□ -1.37
AP000553.6-201ENST00000641242 LAMC3Q9Y6N6 1575 aa6.46□□□□□ -1.38
AP000553.6-201ENST00000641242 CFTRP13569 1480 aa6.43□□□□□ -1.38
AP000553.6-201ENST00000641242 DNAJC5BQ9UF47 199 aa6.42□□□□□ -1.38
AP000553.6-201ENST00000641242 CADPSQ9ULU8 1353 aa6.41□□□□□ -1.38
AP000553.6-201ENST00000641242 CEP164Q9UPV0 1460 aa6.37□□□□□ -1.39
AP000553.6-201ENST00000641242 PDS5BQ9NTI5 1447 aa6.37□□□□□ -1.39
AP000553.6-201ENST00000641242 NESP48681 1621 aa6.36□□□□□ -1.39
AP000553.6-201ENST00000641242 FANCD2Q9BXW9 1451 aa6.36□□□□□ -1.39
AP000553.6-201ENST00000641242 KIF21AQ7Z4S6 1674 aa6.36□□□□□ -1.39
AP000553.6-201ENST00000641242 ERCC6Q03468 1493 aa6.34□□□□□ -1.4
AP000553.6-201ENST00000641242 BIVM-ERCC5R4GMW8 1640 aa6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 ABCC8Q09428 1581 aa6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 DNMBPQ6XZF7 1577 aa6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 THOC2Q8NI27 1593 aaKnown RBP6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 MRC2Q9UBG0 1479 aa6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 WRNQ14191 1432 aaPredicted RBP eCLIP6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 TOP2BQ02880 1626 aa6.32□□□□□ -1.4
AP000553.6-201ENST00000641242 WDR62O43379 1518 aa6.3□□□□□ -1.4
AP000553.6-201ENST00000641242 SYNJ1O43426 1573 aa6.3□□□□□ -1.4
AP000553.6-201ENST00000641242 CUX1P39880 1505 aa6.29□□□□□ -1.4
AP000553.6-201ENST00000641242 URB2Q14146 1524 aaKnown RBP6.28□□□□□ -1.4
AP000553.6-201ENST00000641242 TOPBP1Q92547 1522 aa6.28□□□□□ -1.4
AP000553.6-201ENST00000641242 WDR97A6NE52 1622 aa6.25□□□□□ -1.41
AP000553.6-201ENST00000641242 FGD5Q6ZNL6 1462 aa6.25□□□□□ -1.41
AP000553.6-201ENST00000641242 POLA1P09884 1462 aaPredicted RBP6.24□□□□□ -1.41
AP000553.6-201ENST00000641242 CUX2O14529 1486 aa6.23□□□□□ -1.41
AP000553.6-201ENST00000641242 IFT140Q96RY7 1462 aa6.22□□□□□ -1.41
AP000553.6-201ENST00000641242 ABCA10Q8WWZ4 1543 aa6.21□□□□□ -1.42
AP000553.6-201ENST00000641242 CHIC1Q5VXU3 224 aa6.21□□□□□ -1.42
AP000553.6-201ENST00000641242 EEA1Q15075 1411 aa6.21□□□□□ -1.42
AP000553.6-201ENST00000641242 TARBP1Q13395 1621 aaKnown RBP6.21□□□□□ -1.42
AP000553.6-201ENST00000641242 TRIM41Q8WV44 630 aa6.2□□□□□ -1.42
AP000553.6-201ENST00000641242 ABCA5Q8WWZ7 1642 aa6.2□□□□□ -1.42
AP000553.6-201ENST00000641242 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
AP000553.6-201ENST00000641242 SOGA1O94964 1423 aa6.17□□□□□ -1.42
AP000553.6-201ENST00000641242 KIF27Q86VH2 1401 aa6.17□□□□□ -1.42
AP000553.6-201ENST00000641242 CUL7Q14999 1698 aa6.17□□□□□ -1.42
AP000553.6-201ENST00000641242 PBRM1Q86U86 1689 aa6.17□□□□□ -1.42
AP000553.6-201ENST00000641242 ERICH3Q5RHP9 1530 aa6.16□□□□□ -1.42
AP000553.6-201ENST00000641242 RAD54L2Q9Y4B4 1467 aa6.15□□□□□ -1.42
AP000553.6-201ENST00000641242 GRIN2BQ13224 1484 aa6.14□□□□□ -1.43
AP000553.6-201ENST00000641242 GAPVD1Q14C86 1478 aa6.14□□□□□ -1.43
AP000553.6-201ENST00000641242 ADAMTS12P58397 1594 aa6.14□□□□□ -1.43
AP000553.6-201ENST00000641242 KIF21BO75037 1637 aa6.14□□□□□ -1.43
AP000553.6-201ENST00000641242 MAGI1Q96QZ7 1491 aaPredicted RBP6.13□□□□□ -1.43
AP000553.6-201ENST00000641242 ZNF608Q9ULD9 1512 aaPredicted RBP6.12□□□□□ -1.43
AP000553.6-201ENST00000641242 GOLGA3Q08378 1498 aa6.09□□□□□ -1.43
AP000553.6-201ENST00000641242 SNAPC4Q5SXM2 1469 aa6.09□□□□□ -1.43
AP000553.6-201ENST00000641242 TDRD9Q8NDG6 1382 aaKnown RBP6.09□□□□□ -1.43
AP000553.6-201ENST00000641242 SYNJ2O15056 1496 aa6.09□□□□□ -1.44
AP000553.6-201ENST00000641242 AQRO60306 1485 aaKnown RBP eCLIP6.09□□□□□ -1.44
AP000553.6-201ENST00000641242 PRXQ9BXM0 1461 aa6.09□□□□□ -1.44
AP000553.6-201ENST00000641242 FHAD1B1AJZ9 1412 aa6.08□□□□□ -1.44
AP000553.6-201ENST00000641242 RUSC2Q8N2Y8 1516 aa6.08□□□□□ -1.44
AP000553.6-201ENST00000641242 RAPGEF2Q9Y4G8 1499 aa6.08□□□□□ -1.44
AP000553.6-201ENST00000641242 CTTNBP2Q8WZ74 1663 aa6.07□□□□□ -1.44
AP000553.6-201ENST00000641242 IGF1RP08069 1367 aa6.06□□□□□ -1.44
AP000553.6-201ENST00000641242 GRIN2AQ12879 1464 aa6.06□□□□□ -1.44
AP000553.6-201ENST00000641242 CSRNP3Q8WYN3 585 aa6.05□□□□□ -1.44
AP000553.6-201ENST00000641242 CHD1O14646 1710 aa6.05□□□□□ -1.44
AP000553.6-201ENST00000641242 CARMIL1Q5VZK9 1371 aa6.05□□□□□ -1.44
AP000553.6-201ENST00000641242 IQGAP2Q13576 1575 aa6.03□□□□□ -1.44
AP000553.6-201ENST00000641242 NUP160Q12769 1436 aa6.02□□□□□ -1.45
AP000553.6-201ENST00000641242 FAM9AQ8IZU1 332 aaPredicted RBP6.02□□□□□ -1.45
AP000553.6-201ENST00000641242 CEP170Q5SW79 1584 aa6.01□□□□□ -1.45
AP000553.6-201ENST00000641242 EFCAB5A4FU69 1503 aa6.01□□□□□ -1.45
AP000553.6-201ENST00000641242 TNIKQ9UKE5 1360 aa6□□□□□ -1.45
AP000553.6-201ENST00000641242 CLASP1Q7Z460 1538 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 247.2 ms