RNA–Protein interactions for RNA: ENST00000640967.1

ME2-219, Transcript of malic enzyme 2, humanhuman

TSL 5

Gene ME2, Length 2,569 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME2-219ENST00000640967 NISCHQ9Y2I1 1504 aa41.88■■■■■ 4.29
ME2-219ENST00000640967 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
ME2-219ENST00000640967 ZCCHC6Q5VYS8 1495 aaKnown RBP35.14■■■■□ 3.22
ME2-219ENST00000640967 ABCC9O60706 1549 aa34.79■■■■□ 3.16
ME2-219ENST00000640967 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
ME2-219ENST00000640967 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
ME2-219ENST00000640967 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
ME2-219ENST00000640967 NACADO15069 1562 aa34.11■■■■□ 3.05
ME2-219ENST00000640967 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
ME2-219ENST00000640967 RB1CC1Q8TDY2 1594 aa33.86■■■■□ 3.01
ME2-219ENST00000640967 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
ME2-219ENST00000640967 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
ME2-219ENST00000640967 BICRAQ9NZM4 1560 aa32.87■■■□□ 2.85
ME2-219ENST00000640967 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
ME2-219ENST00000640967 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
ME2-219ENST00000640967 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
ME2-219ENST00000640967 RSF1Q96T23 1441 aaPredicted RBP32.44■■■□□ 2.78
ME2-219ENST00000640967 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
ME2-219ENST00000640967 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
ME2-219ENST00000640967 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
ME2-219ENST00000640967 WIZO95785 1651 aa32.07■■■□□ 2.72
ME2-219ENST00000640967 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.69
ME2-219ENST00000640967 PEG3Q9GZU2 1588 aa31.83■■■□□ 2.69
ME2-219ENST00000640967 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
ME2-219ENST00000640967 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
ME2-219ENST00000640967 SMARCA2P51531 1590 aa31.71■■■□□ 2.67
ME2-219ENST00000640967 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
ME2-219ENST00000640967 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
ME2-219ENST00000640967 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
ME2-219ENST00000640967 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
ME2-219ENST00000640967 HMGXB3Q12766 1538 aa31.42■■■□□ 2.62
ME2-219ENST00000640967 CHIC1Q5VXU3 224 aa31.2■■■□□ 2.59
ME2-219ENST00000640967 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
ME2-219ENST00000640967 CFTRP13569 1480 aa30.77■■■□□ 2.52
ME2-219ENST00000640967 TRIM41Q8WV44 630 aa30.74■■■□□ 2.51
ME2-219ENST00000640967 CADPSQ9ULU8 1353 aa30.7■■■□□ 2.51
ME2-219ENST00000640967 ABCC8Q09428 1581 aa30.7■■■□□ 2.5
ME2-219ENST00000640967 WRNQ14191 1432 aaPredicted RBP eCLIP30.52■■■□□ 2.48
ME2-219ENST00000640967 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
ME2-219ENST00000640967 NESP48681 1621 aa30.5■■■□□ 2.47
ME2-219ENST00000640967 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
ME2-219ENST00000640967 SYNJ1O43426 1573 aa30.4■■■□□ 2.46
ME2-219ENST00000640967 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
ME2-219ENST00000640967 TOP2BQ02880 1626 aa30.28■■■□□ 2.44
ME2-219ENST00000640967 CUX1P39880 1505 aa30.26■■■□□ 2.43
ME2-219ENST00000640967 BIVM-ERCC5R4GMW8 1640 aa30.24■■■□□ 2.43
ME2-219ENST00000640967 PDS5BQ9NTI5 1447 aa30.24■■■□□ 2.43
ME2-219ENST00000640967 FAM9AQ8IZU1 332 aaPredicted RBP30.18■■■□□ 2.42
ME2-219ENST00000640967 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
ME2-219ENST00000640967 SOGA1O94964 1423 aa30.11■■■□□ 2.41
ME2-219ENST00000640967 KIF21AQ7Z4S6 1674 aa30.08■■■□□ 2.41
ME2-219ENST00000640967 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
ME2-219ENST00000640967 LOC105371045A0A1W2PR82 267 aa30.02■■■□□ 2.4
ME2-219ENST00000640967 RUSC2Q8N2Y8 1516 aa30.01■■■□□ 2.39
ME2-219ENST00000640967 TOPBP1Q92547 1522 aa30■■■□□ 2.39
ME2-219ENST00000640967 URB2Q14146 1524 aaKnown RBP29.99■■■□□ 2.39
ME2-219ENST00000640967 EEA1Q15075 1411 aa29.96■■■□□ 2.39
ME2-219ENST00000640967 FGD5Q6ZNL6 1462 aa29.96■■■□□ 2.39
ME2-219ENST00000640967 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
ME2-219ENST00000640967 MRC2Q9UBG0 1479 aa29.85■■■□□ 2.37
ME2-219ENST00000640967 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
ME2-219ENST00000640967 ERCC6Q03468 1493 aa29.83■■■□□ 2.37
ME2-219ENST00000640967 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
ME2-219ENST00000640967 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.36
ME2-219ENST00000640967 KIF27Q86VH2 1401 aa29.76■■■□□ 2.36
ME2-219ENST00000640967 CUX2O14529 1486 aa29.73■■■□□ 2.35
ME2-219ENST00000640967 WDR62O43379 1518 aa29.7■■■□□ 2.34
ME2-219ENST00000640967 ABCA10Q8WWZ4 1543 aa29.69■■■□□ 2.34
ME2-219ENST00000640967 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
ME2-219ENST00000640967 KIF21BO75037 1637 aa29.58■■■□□ 2.33
ME2-219ENST00000640967 WDR97A6NE52 1622 aa29.57■■■□□ 2.32
ME2-219ENST00000640967 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
ME2-219ENST00000640967 IGF1RP08069 1367 aa29.55■■■□□ 2.32
ME2-219ENST00000640967 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
ME2-219ENST00000640967 PRXQ9BXM0 1461 aa29.52■■■□□ 2.32
ME2-219ENST00000640967 TDRD9Q8NDG6 1382 aaKnown RBP29.5■■■□□ 2.31
ME2-219ENST00000640967 RAPGEF2Q9Y4G8 1499 aa29.49■■■□□ 2.31
ME2-219ENST00000640967 IFT140Q96RY7 1462 aa29.46■■■□□ 2.31
ME2-219ENST00000640967 UBTFP17480 764 aaKnown RBP29.46■■■□□ 2.31
ME2-219ENST00000640967 TNIKQ9UKE5 1360 aa29.44■■■□□ 2.3
ME2-219ENST00000640967 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
ME2-219ENST00000640967 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
ME2-219ENST00000640967 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
ME2-219ENST00000640967 CARMIL1Q5VZK9 1371 aa29.38■■■□□ 2.29
ME2-219ENST00000640967 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.29
ME2-219ENST00000640967 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
ME2-219ENST00000640967 CUL7Q14999 1698 aa29.27■■■□□ 2.28
ME2-219ENST00000640967 CEP162Q5TB80 1403 aa29.27■■■□□ 2.28
ME2-219ENST00000640967 PBRM1Q86U86 1689 aa29.22■■■□□ 2.27
ME2-219ENST00000640967 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
ME2-219ENST00000640967 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
ME2-219ENST00000640967 FHAD1B1AJZ9 1412 aa29.1■■■□□ 2.25
ME2-219ENST00000640967 CLIP1P30622 1438 aa29.08■■■□□ 2.25
ME2-219ENST00000640967 ADAMTS12P58397 1594 aa29.07■■■□□ 2.24
ME2-219ENST00000640967 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
ME2-219ENST00000640967 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
ME2-219ENST00000640967 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
ME2-219ENST00000640967 CTTNBP2Q8WZ74 1663 aa28.91■■■□□ 2.22
ME2-219ENST00000640967 SYNJ2O15056 1496 aa28.87■■■□□ 2.21
ME2-219ENST00000640967 ARHGAP35Q9NRY4 1499 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms