RNA–Protein interactions for RNA: ENST00000640963.1

PAX6-281, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-281ENST00000640963 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
PAX6-281ENST00000640963 ABCC9O60706 1549 aa28.08■■■□□ 2.08
PAX6-281ENST00000640963 CCDC180Q9P1Z9 1646 aa27.86■■■□□ 2.05
PAX6-281ENST00000640963 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
PAX6-281ENST00000640963 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
PAX6-281ENST00000640963 NACADO15069 1562 aa26.41■■□□□ 1.82
PAX6-281ENST00000640963 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
PAX6-281ENST00000640963 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
PAX6-281ENST00000640963 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
PAX6-281ENST00000640963 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
PAX6-281ENST00000640963 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
PAX6-281ENST00000640963 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
PAX6-281ENST00000640963 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
PAX6-281ENST00000640963 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
PAX6-281ENST00000640963 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
PAX6-281ENST00000640963 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
PAX6-281ENST00000640963 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
PAX6-281ENST00000640963 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
PAX6-281ENST00000640963 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
PAX6-281ENST00000640963 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
PAX6-281ENST00000640963 CUX2O14529 1486 aa24.31■■□□□ 1.48
PAX6-281ENST00000640963 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
PAX6-281ENST00000640963 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
PAX6-281ENST00000640963 SMARCA2P51531 1590 aa24.18■■□□□ 1.46
PAX6-281ENST00000640963 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
PAX6-281ENST00000640963 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
PAX6-281ENST00000640963 NESP48681 1621 aa24.06■■□□□ 1.44
PAX6-281ENST00000640963 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
PAX6-281ENST00000640963 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
PAX6-281ENST00000640963 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
PAX6-281ENST00000640963 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
PAX6-281ENST00000640963 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
PAX6-281ENST00000640963 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
PAX6-281ENST00000640963 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
PAX6-281ENST00000640963 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
PAX6-281ENST00000640963 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
PAX6-281ENST00000640963 WIZO95785 1651 aa23.55■■□□□ 1.36
PAX6-281ENST00000640963 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
PAX6-281ENST00000640963 WDR62O43379 1518 aa23.47■■□□□ 1.35
PAX6-281ENST00000640963 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
PAX6-281ENST00000640963 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
PAX6-281ENST00000640963 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
PAX6-281ENST00000640963 CFTRP13569 1480 aa23.3■■□□□ 1.32
PAX6-281ENST00000640963 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
PAX6-281ENST00000640963 OSCARQ8IYS5 282 aa23.22■■□□□ 1.31
PAX6-281ENST00000640963 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
PAX6-281ENST00000640963 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
PAX6-281ENST00000640963 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
PAX6-281ENST00000640963 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
PAX6-281ENST00000640963 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
PAX6-281ENST00000640963 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
PAX6-281ENST00000640963 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
PAX6-281ENST00000640963 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
PAX6-281ENST00000640963 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
PAX6-281ENST00000640963 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
PAX6-281ENST00000640963 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
PAX6-281ENST00000640963 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
PAX6-281ENST00000640963 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
PAX6-281ENST00000640963 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
PAX6-281ENST00000640963 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.22
PAX6-281ENST00000640963 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
PAX6-281ENST00000640963 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
PAX6-281ENST00000640963 CHD1O14646 1710 aa22.68■■□□□ 1.22
PAX6-281ENST00000640963 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
PAX6-281ENST00000640963 FBLN2P98095 1184 aa22.62■■□□□ 1.21
PAX6-281ENST00000640963 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
PAX6-281ENST00000640963 SOGA1O94964 1423 aa22.56■■□□□ 1.2
PAX6-281ENST00000640963 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
PAX6-281ENST00000640963 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
PAX6-281ENST00000640963 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
PAX6-281ENST00000640963 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
PAX6-281ENST00000640963 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
PAX6-281ENST00000640963 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
PAX6-281ENST00000640963 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
PAX6-281ENST00000640963 CUX1P39880 1505 aa22.39■■□□□ 1.17
PAX6-281ENST00000640963 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
PAX6-281ENST00000640963 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
PAX6-281ENST00000640963 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
PAX6-281ENST00000640963 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
PAX6-281ENST00000640963 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
PAX6-281ENST00000640963 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
PAX6-281ENST00000640963 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
PAX6-281ENST00000640963 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
PAX6-281ENST00000640963 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
PAX6-281ENST00000640963 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
PAX6-281ENST00000640963 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
PAX6-281ENST00000640963 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
PAX6-281ENST00000640963 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
PAX6-281ENST00000640963 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
PAX6-281ENST00000640963 NUP160Q12769 1436 aa22■■□□□ 1.11
PAX6-281ENST00000640963 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
PAX6-281ENST00000640963 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
PAX6-281ENST00000640963 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
PAX6-281ENST00000640963 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
PAX6-281ENST00000640963 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
PAX6-281ENST00000640963 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
PAX6-281ENST00000640963 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
PAX6-281ENST00000640963 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
PAX6-281ENST00000640963 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
PAX6-281ENST00000640963 KIF13AQ9H1H9 1805 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms