RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
PRICKLE1-221ENST00000640946 ABCC9O60706 1549 aa17.61■□□□□ 0.41
PRICKLE1-221ENST00000640946 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
PRICKLE1-221ENST00000640946 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
PRICKLE1-221ENST00000640946 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
PRICKLE1-221ENST00000640946 NACADO15069 1562 aa16.42■□□□□ 0.22
PRICKLE1-221ENST00000640946 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRICKLE1-221ENST00000640946 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
PRICKLE1-221ENST00000640946 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
PRICKLE1-221ENST00000640946 DCAF8L2P0C7V8 631 aa16.16■□□□□ 0.18
PRICKLE1-221ENST00000640946 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
PRICKLE1-221ENST00000640946 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
PRICKLE1-221ENST00000640946 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
PRICKLE1-221ENST00000640946 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
PRICKLE1-221ENST00000640946 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
PRICKLE1-221ENST00000640946 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
PRICKLE1-221ENST00000640946 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
PRICKLE1-221ENST00000640946 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
PRICKLE1-221ENST00000640946 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
PRICKLE1-221ENST00000640946 CUX2O14529 1486 aa15.27■□□□□ 0.04
PRICKLE1-221ENST00000640946 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
PRICKLE1-221ENST00000640946 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
PRICKLE1-221ENST00000640946 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
PRICKLE1-221ENST00000640946 NESP48681 1621 aa15.08■□□□□ 0
PRICKLE1-221ENST00000640946 HMGXB3Q12766 1538 aa15.03■□□□□ -0
PRICKLE1-221ENST00000640946 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
PRICKLE1-221ENST00000640946 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
PRICKLE1-221ENST00000640946 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
PRICKLE1-221ENST00000640946 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
PRICKLE1-221ENST00000640946 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
PRICKLE1-221ENST00000640946 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
PRICKLE1-221ENST00000640946 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
PRICKLE1-221ENST00000640946 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
PRICKLE1-221ENST00000640946 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
PRICKLE1-221ENST00000640946 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
PRICKLE1-221ENST00000640946 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
PRICKLE1-221ENST00000640946 WDR62O43379 1518 aa14.69□□□□□ -0.06
PRICKLE1-221ENST00000640946 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
PRICKLE1-221ENST00000640946 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
PRICKLE1-221ENST00000640946 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
PRICKLE1-221ENST00000640946 WIZO95785 1651 aa14.58□□□□□ -0.07
PRICKLE1-221ENST00000640946 CEP164Q9UPV0 1460 aa14.54□□□□□ -0.08
PRICKLE1-221ENST00000640946 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
PRICKLE1-221ENST00000640946 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
PRICKLE1-221ENST00000640946 CFTRP13569 1480 aa14.47□□□□□ -0.09
PRICKLE1-221ENST00000640946 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
PRICKLE1-221ENST00000640946 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
PRICKLE1-221ENST00000640946 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
PRICKLE1-221ENST00000640946 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
PRICKLE1-221ENST00000640946 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
PRICKLE1-221ENST00000640946 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
PRICKLE1-221ENST00000640946 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
PRICKLE1-221ENST00000640946 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
PRICKLE1-221ENST00000640946 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.13
PRICKLE1-221ENST00000640946 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
PRICKLE1-221ENST00000640946 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
PRICKLE1-221ENST00000640946 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
PRICKLE1-221ENST00000640946 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
PRICKLE1-221ENST00000640946 CHD1O14646 1710 aa14.19□□□□□ -0.14
PRICKLE1-221ENST00000640946 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
PRICKLE1-221ENST00000640946 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
PRICKLE1-221ENST00000640946 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
PRICKLE1-221ENST00000640946 AQRO60306 1485 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRICKLE1-221ENST00000640946 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
PRICKLE1-221ENST00000640946 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
PRICKLE1-221ENST00000640946 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
PRICKLE1-221ENST00000640946 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
PRICKLE1-221ENST00000640946 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
PRICKLE1-221ENST00000640946 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
PRICKLE1-221ENST00000640946 FBLN2P98095 1184 aa14.01□□□□□ -0.17
PRICKLE1-221ENST00000640946 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
PRICKLE1-221ENST00000640946 SNAPC4Q5SXM2 1469 aa13.98□□□□□ -0.17
PRICKLE1-221ENST00000640946 SOGA1O94964 1423 aa13.95□□□□□ -0.18
PRICKLE1-221ENST00000640946 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
PRICKLE1-221ENST00000640946 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
PRICKLE1-221ENST00000640946 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
PRICKLE1-221ENST00000640946 CUX1P39880 1505 aa13.9□□□□□ -0.18
PRICKLE1-221ENST00000640946 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
PRICKLE1-221ENST00000640946 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
PRICKLE1-221ENST00000640946 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
PRICKLE1-221ENST00000640946 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
PRICKLE1-221ENST00000640946 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
PRICKLE1-221ENST00000640946 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
PRICKLE1-221ENST00000640946 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
PRICKLE1-221ENST00000640946 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.2
PRICKLE1-221ENST00000640946 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
PRICKLE1-221ENST00000640946 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
PRICKLE1-221ENST00000640946 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
PRICKLE1-221ENST00000640946 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
PRICKLE1-221ENST00000640946 CEP170Q5SW79 1584 aa13.73□□□□□ -0.21
PRICKLE1-221ENST00000640946 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
PRICKLE1-221ENST00000640946 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
PRICKLE1-221ENST00000640946 SHROOM2Q13796 1616 aa13.71□□□□□ -0.22
PRICKLE1-221ENST00000640946 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
PRICKLE1-221ENST00000640946 NUP160Q12769 1436 aa13.7□□□□□ -0.22
PRICKLE1-221ENST00000640946 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
PRICKLE1-221ENST00000640946 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
PRICKLE1-221ENST00000640946 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
PRICKLE1-221ENST00000640946 ERICH3Q5RHP9 1530 aa13.55□□□□□ -0.24
PRICKLE1-221ENST00000640946 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms