RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 NISCHQ9Y2I1 1504 aa37.91■■■■□ 3.66
KCNC1-213ENST00000640909 ABCC9O60706 1549 aa35.01■■■■□ 3.2
KCNC1-213ENST00000640909 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
KCNC1-213ENST00000640909 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
KCNC1-213ENST00000640909 RB1CC1Q8TDY2 1594 aa33.16■■■□□ 2.9
KCNC1-213ENST00000640909 NACADO15069 1562 aa32.76■■■□□ 2.84
KCNC1-213ENST00000640909 UNC13AQ9UPW8 1703 aa32.38■■■□□ 2.77
KCNC1-213ENST00000640909 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
KCNC1-213ENST00000640909 BICRAQ9NZM4 1560 aa32.16■■■□□ 2.74
KCNC1-213ENST00000640909 MYO15BQ96JP2 1530 aa32.13■■■□□ 2.73
KCNC1-213ENST00000640909 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
KCNC1-213ENST00000640909 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
KCNC1-213ENST00000640909 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
KCNC1-213ENST00000640909 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
KCNC1-213ENST00000640909 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
KCNC1-213ENST00000640909 DNAJC5Q9H3Z4 198 aa31.41■■■□□ 2.62
KCNC1-213ENST00000640909 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
KCNC1-213ENST00000640909 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
KCNC1-213ENST00000640909 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
KCNC1-213ENST00000640909 CUX2O14529 1486 aa30.68■■■□□ 2.5
KCNC1-213ENST00000640909 ERCC6Q03468 1493 aa30.35■■■□□ 2.45
KCNC1-213ENST00000640909 NCAPD3P42695 1498 aa30.2■■■□□ 2.43
KCNC1-213ENST00000640909 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
KCNC1-213ENST00000640909 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
KCNC1-213ENST00000640909 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
KCNC1-213ENST00000640909 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
KCNC1-213ENST00000640909 NESP48681 1621 aa29.84■■■□□ 2.37
KCNC1-213ENST00000640909 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
KCNC1-213ENST00000640909 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
KCNC1-213ENST00000640909 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
KCNC1-213ENST00000640909 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
KCNC1-213ENST00000640909 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
KCNC1-213ENST00000640909 KIF21AQ7Z4S6 1674 aa29.54■■■□□ 2.32
KCNC1-213ENST00000640909 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
KCNC1-213ENST00000640909 PDS5BQ9NTI5 1447 aa29.5■■■□□ 2.31
KCNC1-213ENST00000640909 WDR62O43379 1518 aa29.29■■■□□ 2.28
KCNC1-213ENST00000640909 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
KCNC1-213ENST00000640909 CADPSQ9ULU8 1353 aa29.19■■■□□ 2.26
KCNC1-213ENST00000640909 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
KCNC1-213ENST00000640909 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
KCNC1-213ENST00000640909 OSCARQ8IYS5 282 aa29■■■□□ 2.23
KCNC1-213ENST00000640909 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
KCNC1-213ENST00000640909 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
KCNC1-213ENST00000640909 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
KCNC1-213ENST00000640909 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
KCNC1-213ENST00000640909 WIZO95785 1651 aa28.75■■■□□ 2.19
KCNC1-213ENST00000640909 CFTRP13569 1480 aa28.74■■■□□ 2.19
KCNC1-213ENST00000640909 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
KCNC1-213ENST00000640909 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
KCNC1-213ENST00000640909 PRDM2Q13029 1718 aa28.5■■■□□ 2.15
KCNC1-213ENST00000640909 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
KCNC1-213ENST00000640909 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
KCNC1-213ENST00000640909 ZNF608Q9ULD9 1512 aaPredicted RBP28.39■■■□□ 2.14
KCNC1-213ENST00000640909 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
KCNC1-213ENST00000640909 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
KCNC1-213ENST00000640909 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
KCNC1-213ENST00000640909 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
KCNC1-213ENST00000640909 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
KCNC1-213ENST00000640909 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
KCNC1-213ENST00000640909 CHD1O14646 1710 aa28.23■■■□□ 2.11
KCNC1-213ENST00000640909 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
KCNC1-213ENST00000640909 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
KCNC1-213ENST00000640909 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
KCNC1-213ENST00000640909 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
KCNC1-213ENST00000640909 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
KCNC1-213ENST00000640909 CCDC88BA6NC98 1476 aa28.01■■■□□ 2.07
KCNC1-213ENST00000640909 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
KCNC1-213ENST00000640909 FBLN2P98095 1184 aa27.91■■■□□ 2.06
KCNC1-213ENST00000640909 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
KCNC1-213ENST00000640909 WDR97A6NE52 1622 aa27.9■■■□□ 2.06
KCNC1-213ENST00000640909 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
KCNC1-213ENST00000640909 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
KCNC1-213ENST00000640909 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.04
KCNC1-213ENST00000640909 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
KCNC1-213ENST00000640909 SOGA1O94964 1423 aa27.71■■■□□ 2.03
KCNC1-213ENST00000640909 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
KCNC1-213ENST00000640909 CHMP7Q8WUX9 453 aaPredicted RBP27.65■■■□□ 2.02
KCNC1-213ENST00000640909 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
KCNC1-213ENST00000640909 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
KCNC1-213ENST00000640909 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
KCNC1-213ENST00000640909 FGD5Q6ZNL6 1462 aa27.59■■■□□ 2.01
KCNC1-213ENST00000640909 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
KCNC1-213ENST00000640909 CUX1P39880 1505 aa27.44■■□□□ 1.98
KCNC1-213ENST00000640909 ABCA5Q8WWZ7 1642 aa27.35■■□□□ 1.97
KCNC1-213ENST00000640909 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
KCNC1-213ENST00000640909 ERCC6L2Q5T890 1561 aa27.3■■□□□ 1.96
KCNC1-213ENST00000640909 KIF13AQ9H1H9 1805 aa27.28■■□□□ 1.96
KCNC1-213ENST00000640909 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
KCNC1-213ENST00000640909 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
KCNC1-213ENST00000640909 SHROOM2Q13796 1616 aa27.25■■□□□ 1.95
KCNC1-213ENST00000640909 NUP160Q12769 1436 aa27.23■■□□□ 1.95
KCNC1-213ENST00000640909 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
KCNC1-213ENST00000640909 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
KCNC1-213ENST00000640909 ABCC10Q5T3U5 1492 aa27.03■■□□□ 1.92
KCNC1-213ENST00000640909 MAPKBP1O60336 1514 aa27.01■■□□□ 1.91
KCNC1-213ENST00000640909 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
KCNC1-213ENST00000640909 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
KCNC1-213ENST00000640909 DIP2BQ9P265 1576 aa26.96■■□□□ 1.91
KCNC1-213ENST00000640909 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
KCNC1-213ENST00000640909 KDM6BO15054 1643 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms