RNA–Protein interactions for RNA: ENST00000640716.1

PTGDS-210, Transcript of prostaglandin D2 synthase, humanhuman

TSL 5

Gene PTGDS, Length 601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDS-210ENST00000640716 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
PTGDS-210ENST00000640716 ABCC9O60706 1549 aa25.78■■□□□ 1.72
PTGDS-210ENST00000640716 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
PTGDS-210ENST00000640716 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
PTGDS-210ENST00000640716 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
PTGDS-210ENST00000640716 NACADO15069 1562 aa23.91■■□□□ 1.42
PTGDS-210ENST00000640716 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
PTGDS-210ENST00000640716 UNC13AQ9UPW8 1703 aa23.86■■□□□ 1.41
PTGDS-210ENST00000640716 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
PTGDS-210ENST00000640716 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
PTGDS-210ENST00000640716 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
PTGDS-210ENST00000640716 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
PTGDS-210ENST00000640716 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
PTGDS-210ENST00000640716 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
PTGDS-210ENST00000640716 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
PTGDS-210ENST00000640716 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
PTGDS-210ENST00000640716 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
PTGDS-210ENST00000640716 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
PTGDS-210ENST00000640716 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
PTGDS-210ENST00000640716 CUX2O14529 1486 aa22.38■■□□□ 1.17
PTGDS-210ENST00000640716 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
PTGDS-210ENST00000640716 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
PTGDS-210ENST00000640716 NESP48681 1621 aa21.99■■□□□ 1.11
PTGDS-210ENST00000640716 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
PTGDS-210ENST00000640716 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
PTGDS-210ENST00000640716 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
PTGDS-210ENST00000640716 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
PTGDS-210ENST00000640716 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
PTGDS-210ENST00000640716 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
PTGDS-210ENST00000640716 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
PTGDS-210ENST00000640716 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
PTGDS-210ENST00000640716 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
PTGDS-210ENST00000640716 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
PTGDS-210ENST00000640716 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
PTGDS-210ENST00000640716 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
PTGDS-210ENST00000640716 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
PTGDS-210ENST00000640716 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
PTGDS-210ENST00000640716 WDR62O43379 1518 aa21.4■■□□□ 1.02
PTGDS-210ENST00000640716 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
PTGDS-210ENST00000640716 OSCARQ8IYS5 282 aa21.27■■□□□ 1
PTGDS-210ENST00000640716 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
PTGDS-210ENST00000640716 CEP164Q9UPV0 1460 aa21.24■□□□□ 0.99
PTGDS-210ENST00000640716 WIZO95785 1651 aa21.21■□□□□ 0.99
PTGDS-210ENST00000640716 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
PTGDS-210ENST00000640716 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
PTGDS-210ENST00000640716 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
PTGDS-210ENST00000640716 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
PTGDS-210ENST00000640716 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
PTGDS-210ENST00000640716 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
PTGDS-210ENST00000640716 CFTRP13569 1480 aa21.01■□□□□ 0.95
PTGDS-210ENST00000640716 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
PTGDS-210ENST00000640716 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
PTGDS-210ENST00000640716 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
PTGDS-210ENST00000640716 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.94
PTGDS-210ENST00000640716 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
PTGDS-210ENST00000640716 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
PTGDS-210ENST00000640716 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
PTGDS-210ENST00000640716 CHD1O14646 1710 aa20.78■□□□□ 0.92
PTGDS-210ENST00000640716 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
PTGDS-210ENST00000640716 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
PTGDS-210ENST00000640716 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
PTGDS-210ENST00000640716 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
PTGDS-210ENST00000640716 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
PTGDS-210ENST00000640716 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.89
PTGDS-210ENST00000640716 FBLN2P98095 1184 aa20.61■□□□□ 0.89
PTGDS-210ENST00000640716 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
PTGDS-210ENST00000640716 ABCC8Q09428 1581 aa20.58■□□□□ 0.88
PTGDS-210ENST00000640716 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
PTGDS-210ENST00000640716 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
PTGDS-210ENST00000640716 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
PTGDS-210ENST00000640716 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
PTGDS-210ENST00000640716 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
PTGDS-210ENST00000640716 SNAPC4Q5SXM2 1469 aa20.38■□□□□ 0.85
PTGDS-210ENST00000640716 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
PTGDS-210ENST00000640716 SOGA1O94964 1423 aa20.35■□□□□ 0.85
PTGDS-210ENST00000640716 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
PTGDS-210ENST00000640716 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
PTGDS-210ENST00000640716 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
PTGDS-210ENST00000640716 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
PTGDS-210ENST00000640716 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
PTGDS-210ENST00000640716 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
PTGDS-210ENST00000640716 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
PTGDS-210ENST00000640716 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
PTGDS-210ENST00000640716 CUX1P39880 1505 aa20.16■□□□□ 0.82
PTGDS-210ENST00000640716 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
PTGDS-210ENST00000640716 KIF13AQ9H1H9 1805 aa20.08■□□□□ 0.8
PTGDS-210ENST00000640716 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
PTGDS-210ENST00000640716 ABCA5Q8WWZ7 1642 aa20.04■□□□□ 0.8
PTGDS-210ENST00000640716 CEP170Q5SW79 1584 aa20.01■□□□□ 0.79
PTGDS-210ENST00000640716 GRIN2AQ12879 1464 aa19.98■□□□□ 0.79
PTGDS-210ENST00000640716 ABCA10Q8WWZ4 1543 aa19.96■□□□□ 0.79
PTGDS-210ENST00000640716 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
PTGDS-210ENST00000640716 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
PTGDS-210ENST00000640716 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
PTGDS-210ENST00000640716 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
PTGDS-210ENST00000640716 NUP160Q12769 1436 aa19.9■□□□□ 0.78
PTGDS-210ENST00000640716 FAM69CQ0P6D2 419 aa19.8■□□□□ 0.76
PTGDS-210ENST00000640716 ILDR1Q86SU0 546 aaPredicted RBP19.8■□□□□ 0.76
PTGDS-210ENST00000640716 KDM4FA0A1W2PPD8 638 aa19.79■□□□□ 0.76
PTGDS-210ENST00000640716 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms