RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
GABRD-216ENST00000640688 ABCC9O60706 1549 aa44.66■■■■■ 4.74
GABRD-216ENST00000640688 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
GABRD-216ENST00000640688 RB1CC1Q8TDY2 1594 aa42.4■■■■■ 4.38
GABRD-216ENST00000640688 NACADO15069 1562 aa42.1■■■■■ 4.33
GABRD-216ENST00000640688 DNAJC5BQ9UF47 199 aa41.99■■■■■ 4.31
GABRD-216ENST00000640688 DCAF8L2P0C7V8 631 aa41.96■■■■■ 4.31
GABRD-216ENST00000640688 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
GABRD-216ENST00000640688 UNC13AQ9UPW8 1703 aa41.58■■■■■ 4.25
GABRD-216ENST00000640688 MYO15BQ96JP2 1530 aa41.47■■■■■ 4.23
GABRD-216ENST00000640688 BICRAQ9NZM4 1560 aa41.28■■■■■ 4.2
GABRD-216ENST00000640688 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
GABRD-216ENST00000640688 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
GABRD-216ENST00000640688 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
GABRD-216ENST00000640688 SHROOM4Q9ULL8 1493 aa40.53■■■■■ 4.08
GABRD-216ENST00000640688 CC2D2AQ9P2K1 1620 aa40.33■■■■■ 4.05
GABRD-216ENST00000640688 EIF4G1Q04637 1599 aaKnown RBP40.22■■■■■ 4.03
GABRD-216ENST00000640688 CECR2Q9BXF3 1484 aa40.19■■■■■ 4.02
GABRD-216ENST00000640688 NCAPD3P42695 1498 aa38.88■■■■□ 3.81
GABRD-216ENST00000640688 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
GABRD-216ENST00000640688 SMARCA4P51532 1647 aa38.76■■■■□ 3.8
GABRD-216ENST00000640688 SMARCA2P51531 1590 aa38.63■■■■□ 3.77
GABRD-216ENST00000640688 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
GABRD-216ENST00000640688 BAZ1AQ9NRL2 1556 aaPredicted RBP38.51■■■■□ 3.76
GABRD-216ENST00000640688 ERCC6Q03468 1493 aa38.49■■■■□ 3.75
GABRD-216ENST00000640688 DNAJC5Q9H3Z4 198 aa38.47■■■■□ 3.75
GABRD-216ENST00000640688 CUX2O14529 1486 aa38.41■■■■□ 3.74
GABRD-216ENST00000640688 BAZ1BQ9UIG0 1483 aaKnown RBP38.4■■■■□ 3.74
GABRD-216ENST00000640688 NESP48681 1621 aa38.39■■■■□ 3.74
GABRD-216ENST00000640688 PEG3Q9GZU2 1588 aa38.35■■■■□ 3.73
GABRD-216ENST00000640688 MROH2BQ7Z745 1585 aa38.31■■■■□ 3.72
GABRD-216ENST00000640688 LAMC3Q9Y6N6 1575 aa38■■■■□ 3.67
GABRD-216ENST00000640688 THOC2Q8NI27 1593 aaKnown RBP37.97■■■■□ 3.67
GABRD-216ENST00000640688 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.66
GABRD-216ENST00000640688 WIZO95785 1651 aa37.88■■■■□ 3.65
GABRD-216ENST00000640688 PDS5BQ9NTI5 1447 aa37.76■■■■□ 3.63
GABRD-216ENST00000640688 CADPSQ9ULU8 1353 aa37.7■■■■□ 3.63
GABRD-216ENST00000640688 MRC2Q9UBG0 1479 aa37.48■■■■□ 3.59
GABRD-216ENST00000640688 RSF1Q96T23 1441 aaPredicted RBP37.48■■■■□ 3.59
GABRD-216ENST00000640688 WDR62O43379 1518 aa37.41■■■■□ 3.58
GABRD-216ENST00000640688 CEP164Q9UPV0 1460 aa37.32■■■■□ 3.56
GABRD-216ENST00000640688 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
GABRD-216ENST00000640688 FANCD2Q9BXW9 1451 aa37.3■■■■□ 3.56
GABRD-216ENST00000640688 CFTRP13569 1480 aa37.28■■■■□ 3.56
GABRD-216ENST00000640688 URB2Q14146 1524 aaKnown RBP37.04■■■■□ 3.52
GABRD-216ENST00000640688 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
GABRD-216ENST00000640688 PRDM2Q13029 1718 aa36.92■■■■□ 3.5
GABRD-216ENST00000640688 TRIM41Q8WV44 630 aa36.82■■■■□ 3.48
GABRD-216ENST00000640688 OSCARQ8IYS5 282 aa36.66■■■■□ 3.46
GABRD-216ENST00000640688 ZNF608Q9ULD9 1512 aaPredicted RBP36.61■■■■□ 3.45
GABRD-216ENST00000640688 TOPBP1Q92547 1522 aa36.6■■■■□ 3.45
GABRD-216ENST00000640688 IFT140Q96RY7 1462 aa36.56■■■■□ 3.44
GABRD-216ENST00000640688 DNMBPQ6XZF7 1577 aa36.44■■■■□ 3.42
GABRD-216ENST00000640688 ABCC8Q09428 1581 aa36.41■■■■□ 3.42
GABRD-216ENST00000640688 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
GABRD-216ENST00000640688 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
GABRD-216ENST00000640688 RIMBP3CA6NJZ7 1639 aa36.26■■■■□ 3.4
GABRD-216ENST00000640688 RIMBP3BA6NNM3 1639 aa36.26■■■■□ 3.4
GABRD-216ENST00000640688 RIMBP3Q9UFD9 1639 aa36.26■■■■□ 3.4
GABRD-216ENST00000640688 AQRO60306 1485 aaKnown RBP eCLIP36.25■■■■□ 3.39
GABRD-216ENST00000640688 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
GABRD-216ENST00000640688 RAD54L2Q9Y4B4 1467 aa36.14■■■■□ 3.38
GABRD-216ENST00000640688 CHD1O14646 1710 aa36.13■■■■□ 3.37
GABRD-216ENST00000640688 ARHGEF11O15085 1522 aa36.13■■■■□ 3.37
GABRD-216ENST00000640688 SOGA1O94964 1423 aa36.04■■■■□ 3.36
GABRD-216ENST00000640688 TDRD9Q8NDG6 1382 aaKnown RBP36.02■■■■□ 3.36
GABRD-216ENST00000640688 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
GABRD-216ENST00000640688 CUX1P39880 1505 aa35.99■■■■□ 3.35
GABRD-216ENST00000640688 FBLN2P98095 1184 aa35.99■■■■□ 3.35
GABRD-216ENST00000640688 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
GABRD-216ENST00000640688 CYB5RLQ6IPT4 315 aa35.86■■■■□ 3.33
GABRD-216ENST00000640688 SUPT5HO00267 1087 aaKnown RBP35.82■■■■□ 3.32
GABRD-216ENST00000640688 WDR97A6NE52 1622 aa35.81■■■■□ 3.32
GABRD-216ENST00000640688 ARAP1Q96P48 1450 aa35.8■■■■□ 3.32
GABRD-216ENST00000640688 GRIN2BQ13224 1484 aa35.71■■■■□ 3.31
GABRD-216ENST00000640688 MAGI1Q96QZ7 1491 aaPredicted RBP35.7■■■■□ 3.31
GABRD-216ENST00000640688 CLASP1Q7Z460 1538 aa35.68■■■■□ 3.3
GABRD-216ENST00000640688 CHMP7Q8WUX9 453 aaPredicted RBP35.68■■■■□ 3.3
GABRD-216ENST00000640688 PBRM1Q86U86 1689 aa35.63■■■■□ 3.29
GABRD-216ENST00000640688 SYNJ2O15056 1496 aa35.6■■■■□ 3.29
GABRD-216ENST00000640688 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
GABRD-216ENST00000640688 SYNJ1O43426 1573 aa35.6■■■■□ 3.29
GABRD-216ENST00000640688 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
GABRD-216ENST00000640688 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
GABRD-216ENST00000640688 TRHP20396 242 aaPredicted RBP35.45■■■■□ 3.27
GABRD-216ENST00000640688 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
GABRD-216ENST00000640688 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
GABRD-216ENST00000640688 TOP2BQ02880 1626 aa35.36■■■■□ 3.25
GABRD-216ENST00000640688 ADAMTS12P58397 1594 aa35.27■■■■□ 3.24
GABRD-216ENST00000640688 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
GABRD-216ENST00000640688 ERCC6L2Q5T890 1561 aa35.21■■■■□ 3.23
GABRD-216ENST00000640688 CEP170Q5SW79 1584 aa35.2■■■■□ 3.23
GABRD-216ENST00000640688 NUP160Q12769 1436 aa35.15■■■■□ 3.22
GABRD-216ENST00000640688 FHAD1B1AJZ9 1412 aa35.12■■■■□ 3.21
GABRD-216ENST00000640688 ERICH3Q5RHP9 1530 aa35.09■■■■□ 3.21
GABRD-216ENST00000640688 SHROOM2Q13796 1616 aa35.03■■■■□ 3.2
GABRD-216ENST00000640688 PRG4Q92954 1404 aaPredicted RBP34.83■■■■□ 3.17
GABRD-216ENST00000640688 JPH4Q96JJ6 628 aa34.79■■■■□ 3.16
GABRD-216ENST00000640688 RUSC2Q8N2Y8 1516 aa34.78■■■■□ 3.16
GABRD-216ENST00000640688 IGF1RP08069 1367 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms