RNA–Protein interactions for RNA: ENST00000640619.1

RET-207, Transcript of ret proto-oncogene, humanhuman

TSL 5

Gene RET, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-207ENST00000640619 NISCHQ9Y2I1 1504 aa41.73■■■■■ 4.27
RET-207ENST00000640619 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
RET-207ENST00000640619 ABCC9O60706 1549 aa36.52■■■■□ 3.44
RET-207ENST00000640619 RB1CC1Q8TDY2 1594 aa35.02■■■■□ 3.2
RET-207ENST00000640619 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
RET-207ENST00000640619 NACADO15069 1562 aa34.95■■■■□ 3.18
RET-207ENST00000640619 ZCCHC6Q5VYS8 1495 aaKnown RBP34.74■■■■□ 3.15
RET-207ENST00000640619 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
RET-207ENST00000640619 DCAF1Q9Y4B6 1507 aa34.48■■■■□ 3.11
RET-207ENST00000640619 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
RET-207ENST00000640619 PABPN1Q86U42 306 aaKnown RBP eCLIP34.12■■■■□ 3.05
RET-207ENST00000640619 BICRAQ9NZM4 1560 aa33.99■■■■□ 3.03
RET-207ENST00000640619 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
RET-207ENST00000640619 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
RET-207ENST00000640619 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
RET-207ENST00000640619 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
RET-207ENST00000640619 CC2D2AQ9P2K1 1620 aa33.01■■■□□ 2.87
RET-207ENST00000640619 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
RET-207ENST00000640619 SMARCA4P51532 1647 aa32.42■■■□□ 2.78
RET-207ENST00000640619 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
RET-207ENST00000640619 ATAD2BQ9ULI0 1458 aa32.28■■■□□ 2.76
RET-207ENST00000640619 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
RET-207ENST00000640619 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
RET-207ENST00000640619 MROH2BQ7Z745 1585 aa32.18■■■□□ 2.74
RET-207ENST00000640619 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
RET-207ENST00000640619 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
RET-207ENST00000640619 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
RET-207ENST00000640619 WIZO95785 1651 aa31.84■■■□□ 2.69
RET-207ENST00000640619 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
RET-207ENST00000640619 NESP48681 1621 aa31.57■■■□□ 2.64
RET-207ENST00000640619 ERCC6Q03468 1493 aa31.47■■■□□ 2.63
RET-207ENST00000640619 TOP2AP11388 1531 aaKnown RBP31.46■■■□□ 2.63
RET-207ENST00000640619 LAMC3Q9Y6N6 1575 aa31.42■■■□□ 2.62
RET-207ENST00000640619 CADPSQ9ULU8 1353 aa31.31■■■□□ 2.6
RET-207ENST00000640619 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
RET-207ENST00000640619 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
RET-207ENST00000640619 CUX2O14529 1486 aa31.15■■■□□ 2.58
RET-207ENST00000640619 CCDC88BA6NC98 1476 aa31.11■■■□□ 2.57
RET-207ENST00000640619 CFTRP13569 1480 aa31.1■■■□□ 2.57
RET-207ENST00000640619 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
RET-207ENST00000640619 FANCD2Q9BXW9 1451 aa30.97■■■□□ 2.55
RET-207ENST00000640619 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
RET-207ENST00000640619 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
RET-207ENST00000640619 SUPT5HO00267 1087 aaKnown RBP30.9■■■□□ 2.54
RET-207ENST00000640619 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
RET-207ENST00000640619 WDR62O43379 1518 aa30.82■■■□□ 2.52
RET-207ENST00000640619 URB2Q14146 1524 aaKnown RBP30.68■■■□□ 2.5
RET-207ENST00000640619 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
RET-207ENST00000640619 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
RET-207ENST00000640619 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
RET-207ENST00000640619 DNAJC5Q9H3Z4 198 aa30.36■■■□□ 2.45
RET-207ENST00000640619 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
RET-207ENST00000640619 POLA1P09884 1462 aaPredicted RBP30.2■■■□□ 2.43
RET-207ENST00000640619 CUX1P39880 1505 aa30.2■■■□□ 2.42
RET-207ENST00000640619 ZNF608Q9ULD9 1512 aaPredicted RBP30.2■■■□□ 2.42
RET-207ENST00000640619 TARBP1Q13395 1621 aaKnown RBP30.14■■■□□ 2.41
RET-207ENST00000640619 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
RET-207ENST00000640619 RAD54L2Q9Y4B4 1467 aa30.1■■■□□ 2.41
RET-207ENST00000640619 SOGA1O94964 1423 aa30.06■■■□□ 2.4
RET-207ENST00000640619 EIF4G3O43432 1585 aaKnown RBP30.06■■■□□ 2.4
RET-207ENST00000640619 AQRO60306 1485 aaKnown RBP eCLIP30.01■■■□□ 2.4
RET-207ENST00000640619 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
RET-207ENST00000640619 TDRD9Q8NDG6 1382 aaKnown RBP29.93■■■□□ 2.38
RET-207ENST00000640619 SYNJ1O43426 1573 aa29.9■■■□□ 2.38
RET-207ENST00000640619 TOP2BQ02880 1626 aa29.89■■■□□ 2.37
RET-207ENST00000640619 BIVM-ERCC5R4GMW8 1640 aa29.88■■■□□ 2.37
RET-207ENST00000640619 WDR97A6NE52 1622 aa29.86■■■□□ 2.37
RET-207ENST00000640619 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
RET-207ENST00000640619 ABCA10Q8WWZ4 1543 aa29.8■■■□□ 2.36
RET-207ENST00000640619 SNAPC4Q5SXM2 1469 aa29.73■■■□□ 2.35
RET-207ENST00000640619 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
RET-207ENST00000640619 GAPVD1Q14C86 1478 aa29.72■■■□□ 2.35
RET-207ENST00000640619 CHD1O14646 1710 aa29.71■■■□□ 2.35
RET-207ENST00000640619 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.34
RET-207ENST00000640619 FBLN2P98095 1184 aa29.69■■■□□ 2.34
RET-207ENST00000640619 PBRM1Q86U86 1689 aa29.68■■■□□ 2.34
RET-207ENST00000640619 MAGI1Q96QZ7 1491 aaPredicted RBP29.64■■■□□ 2.34
RET-207ENST00000640619 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
RET-207ENST00000640619 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
RET-207ENST00000640619 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
RET-207ENST00000640619 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
RET-207ENST00000640619 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
RET-207ENST00000640619 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
RET-207ENST00000640619 RIMBP3Q9UFD9 1639 aa29.41■■■□□ 2.3
RET-207ENST00000640619 ARHGEF11O15085 1522 aa29.39■■■□□ 2.3
RET-207ENST00000640619 CLASP1Q7Z460 1538 aa29.37■■■□□ 2.29
RET-207ENST00000640619 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
RET-207ENST00000640619 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
RET-207ENST00000640619 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
RET-207ENST00000640619 KIF27Q86VH2 1401 aa29.32■■■□□ 2.28
RET-207ENST00000640619 IGF1RP08069 1367 aa29.23■■■□□ 2.27
RET-207ENST00000640619 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
RET-207ENST00000640619 NUP160Q12769 1436 aa29.21■■■□□ 2.27
RET-207ENST00000640619 ARAP1Q96P48 1450 aa29.15■■■□□ 2.26
RET-207ENST00000640619 CYB5RLQ6IPT4 315 aa29.14■■■□□ 2.26
RET-207ENST00000640619 CUL7Q14999 1698 aa29.14■■■□□ 2.26
RET-207ENST00000640619 RUSC2Q8N2Y8 1516 aa29.07■■■□□ 2.24
RET-207ENST00000640619 CARMIL1Q5VZK9 1371 aa29.05■■■□□ 2.24
RET-207ENST00000640619 SHROOM2Q13796 1616 aa29.01■■■□□ 2.23
RET-207ENST00000640619 ERCC6L2Q5T890 1561 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms