RNA–Protein interactions for RNA: ENST00000640617.1

PAX6-275, Transcript of paired box 6, humanhuman

TSL 4

Gene PAX6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-275ENST00000640617 NISCHQ9Y2I1 1504 aa56.12■■■■■ 6.57
PAX6-275ENST00000640617 ABCC9O60706 1549 aa50.32■■■■■ 5.65
PAX6-275ENST00000640617 CCDC180Q9P1Z9 1646 aa50.27■■■■■ 5.64
PAX6-275ENST00000640617 RB1CC1Q8TDY2 1594 aa47.91■■■■■ 5.26
PAX6-275ENST00000640617 NACADO15069 1562 aa47.6■■■■■ 5.21
PAX6-275ENST00000640617 DCAF8L2P0C7V8 631 aa47.51■■■■■ 5.2
PAX6-275ENST00000640617 DNAJC5BQ9UF47 199 aa47.22■■■■■ 5.15
PAX6-275ENST00000640617 MYO15BQ96JP2 1530 aa46.95■■■■■ 5.11
PAX6-275ENST00000640617 PABPN1Q86U42 306 aaKnown RBP eCLIP46.93■■■■■ 5.1
PAX6-275ENST00000640617 UNC13AQ9UPW8 1703 aa46.68■■■■■ 5.06
PAX6-275ENST00000640617 ZCCHC6Q5VYS8 1495 aaKnown RBP46.48■■■■■ 5.03
PAX6-275ENST00000640617 BICRAQ9NZM4 1560 aa46.45■■■■■ 5.03
PAX6-275ENST00000640617 DCAF1Q9Y4B6 1507 aa46.35■■■■■ 5.01
PAX6-275ENST00000640617 SHROOM4Q9ULL8 1493 aa45.9■■■■■ 4.94
PAX6-275ENST00000640617 SCRIBQ14160 1630 aa45.83■■■■■ 4.93
PAX6-275ENST00000640617 CC2D2AQ9P2K1 1620 aa45.42■■■■■ 4.86
PAX6-275ENST00000640617 CECR2Q9BXF3 1484 aa45.36■■■■■ 4.85
PAX6-275ENST00000640617 EIF4G1Q04637 1599 aaKnown RBP45.34■■■■■ 4.85
PAX6-275ENST00000640617 NCAPD3P42695 1498 aa43.97■■■■■ 4.63
PAX6-275ENST00000640617 ATAD2BQ9ULI0 1458 aa43.82■■■■■ 4.6
PAX6-275ENST00000640617 SMARCA4P51532 1647 aa43.72■■■■■ 4.59
PAX6-275ENST00000640617 SMARCA2P51531 1590 aa43.7■■■■■ 4.59
PAX6-275ENST00000640617 HMGXB3Q12766 1538 aa43.58■■■■■ 4.57
PAX6-275ENST00000640617 BAZ1AQ9NRL2 1556 aaPredicted RBP43.55■■■■■ 4.56
PAX6-275ENST00000640617 ERCC6Q03468 1493 aa43.49■■■■■ 4.55
PAX6-275ENST00000640617 BAZ1BQ9UIG0 1483 aaKnown RBP43.4■■■■■ 4.54
PAX6-275ENST00000640617 DNAJC5Q9H3Z4 198 aa43.4■■■■■ 4.54
PAX6-275ENST00000640617 CUX2O14529 1486 aa43.38■■■■■ 4.54
PAX6-275ENST00000640617 PEG3Q9GZU2 1588 aa43.3■■■■■ 4.52
PAX6-275ENST00000640617 MROH2BQ7Z745 1585 aa43.22■■■■■ 4.51
PAX6-275ENST00000640617 NESP48681 1621 aa43.22■■■■■ 4.51
PAX6-275ENST00000640617 LAMC3Q9Y6N6 1575 aa42.93■■■■■ 4.46
PAX6-275ENST00000640617 PDS5BQ9NTI5 1447 aa42.77■■■■■ 4.44
PAX6-275ENST00000640617 THOC2Q8NI27 1593 aaKnown RBP42.71■■■■■ 4.43
PAX6-275ENST00000640617 WIZO95785 1651 aa42.66■■■■■ 4.42
PAX6-275ENST00000640617 CADPSQ9ULU8 1353 aa42.66■■■■■ 4.42
PAX6-275ENST00000640617 KIF21AQ7Z4S6 1674 aa42.58■■■■■ 4.41
PAX6-275ENST00000640617 RSF1Q96T23 1441 aaPredicted RBP42.38■■■■■ 4.38
PAX6-275ENST00000640617 MRC2Q9UBG0 1479 aa42.34■■■■■ 4.37
PAX6-275ENST00000640617 WDR62O43379 1518 aa42.19■■■■■ 4.34
PAX6-275ENST00000640617 CEP164Q9UPV0 1460 aa42.17■■■■■ 4.34
PAX6-275ENST00000640617 TOP2AP11388 1531 aaKnown RBP42.16■■■■■ 4.34
PAX6-275ENST00000640617 CFTRP13569 1480 aa42.14■■■■■ 4.34
PAX6-275ENST00000640617 FANCD2Q9BXW9 1451 aa42.14■■■■■ 4.34
PAX6-275ENST00000640617 URB2Q14146 1524 aaKnown RBP41.75■■■■■ 4.27
PAX6-275ENST00000640617 CCDC88BA6NC98 1476 aa41.73■■■■■ 4.27
PAX6-275ENST00000640617 PRDM2Q13029 1718 aa41.58■■■■■ 4.25
PAX6-275ENST00000640617 OSCARQ8IYS5 282 aa41.52■■■■■ 4.24
PAX6-275ENST00000640617 TRIM41Q8WV44 630 aa41.51■■■■■ 4.24
PAX6-275ENST00000640617 IFT140Q96RY7 1462 aa41.35■■■■■ 4.21
PAX6-275ENST00000640617 TOPBP1Q92547 1522 aa41.32■■■■■ 4.2
PAX6-275ENST00000640617 ABCC8Q09428 1581 aa41.3■■■■■ 4.2
PAX6-275ENST00000640617 ZNF608Q9ULD9 1512 aaPredicted RBP41.24■■■■■ 4.19
PAX6-275ENST00000640617 DNMBPQ6XZF7 1577 aa41.16■■■■■ 4.18
PAX6-275ENST00000640617 EIF4G3O43432 1585 aaKnown RBP40.96■■■■■ 4.15
PAX6-275ENST00000640617 AQRO60306 1485 aaKnown RBP eCLIP40.92■■■■■ 4.14
PAX6-275ENST00000640617 TARBP1Q13395 1621 aaKnown RBP40.91■■■■■ 4.14
PAX6-275ENST00000640617 POLA1P09884 1462 aaPredicted RBP40.9■■■■■ 4.14
PAX6-275ENST00000640617 RIMBP3CA6NJZ7 1639 aa40.8■■■■■ 4.12
PAX6-275ENST00000640617 RIMBP3BA6NNM3 1639 aa40.8■■■■■ 4.12
PAX6-275ENST00000640617 RIMBP3Q9UFD9 1639 aa40.8■■■■■ 4.12
PAX6-275ENST00000640617 SOGA1O94964 1423 aa40.79■■■■■ 4.12
PAX6-275ENST00000640617 RAD54L2Q9Y4B4 1467 aa40.77■■■■■ 4.12
PAX6-275ENST00000640617 FBLN2P98095 1184 aa40.73■■■■■ 4.11
PAX6-275ENST00000640617 ARHGEF11O15085 1522 aa40.71■■■■■ 4.11
PAX6-275ENST00000640617 TDRD9Q8NDG6 1382 aaKnown RBP40.69■■■■■ 4.1
PAX6-275ENST00000640617 FGD5Q6ZNL6 1462 aa40.64■■■■■ 4.1
PAX6-275ENST00000640617 CHD1O14646 1710 aa40.62■■■■■ 4.09
PAX6-275ENST00000640617 SUPT5HO00267 1087 aaKnown RBP40.61■■■■■ 4.09
PAX6-275ENST00000640617 CUX1P39880 1505 aa40.61■■■■■ 4.09
PAX6-275ENST00000640617 WDR97A6NE52 1622 aa40.53■■■■■ 4.08
PAX6-275ENST00000640617 CYB5RLQ6IPT4 315 aa40.52■■■■■ 4.08
PAX6-275ENST00000640617 SNAPC4Q5SXM2 1469 aa40.46■■■■■ 4.07
PAX6-275ENST00000640617 CHMP7Q8WUX9 453 aaPredicted RBP40.44■■■■■ 4.06
PAX6-275ENST00000640617 GRIN2BQ13224 1484 aa40.4■■■■■ 4.06
PAX6-275ENST00000640617 MAGI1Q96QZ7 1491 aaPredicted RBP40.39■■■■■ 4.06
PAX6-275ENST00000640617 ARAP1Q96P48 1450 aa40.31■■■■■ 4.04
PAX6-275ENST00000640617 GAPVD1Q14C86 1478 aa40.26■■■■■ 4.04
PAX6-275ENST00000640617 SYNJ2O15056 1496 aa40.26■■■■■ 4.03
PAX6-275ENST00000640617 SYNJ1O43426 1573 aa40.23■■■■■ 4.03
PAX6-275ENST00000640617 CLASP1Q7Z460 1538 aa40.21■■■■■ 4.03
PAX6-275ENST00000640617 ABCA10Q8WWZ4 1543 aa40.21■■■■■ 4.03
PAX6-275ENST00000640617 PBRM1Q86U86 1689 aa40.11■■■■■ 4.01
PAX6-275ENST00000640617 WRNQ14191 1432 aaPredicted RBP eCLIP40.11■■■■■ 4.01
PAX6-275ENST00000640617 TRHP20396 242 aaPredicted RBP40.09■■■■■ 4.01
PAX6-275ENST00000640617 ABCA5Q8WWZ7 1642 aa40.07■■■■■ 4.01
PAX6-275ENST00000640617 TOP2BQ02880 1626 aa39.95■■■■□ 3.99
PAX6-275ENST00000640617 BIVM-ERCC5R4GMW8 1640 aa39.92■■■■□ 3.98
PAX6-275ENST00000640617 GRIN2AQ12879 1464 aa39.85■■■■□ 3.97
PAX6-275ENST00000640617 ADAMTS12P58397 1594 aa39.78■■■■□ 3.96
PAX6-275ENST00000640617 FHAD1B1AJZ9 1412 aa39.76■■■■□ 3.96
PAX6-275ENST00000640617 NUP160Q12769 1436 aa39.72■■■■□ 3.95
PAX6-275ENST00000640617 ERICH3Q5RHP9 1530 aa39.7■■■■□ 3.95
PAX6-275ENST00000640617 CEP170Q5SW79 1584 aa39.66■■■■□ 3.94
PAX6-275ENST00000640617 ERCC6L2Q5T890 1561 aa39.58■■■■□ 3.93
PAX6-275ENST00000640617 SHROOM2Q13796 1616 aa39.48■■■■□ 3.91
PAX6-275ENST00000640617 JPH4Q96JJ6 628 aa39.42■■■■□ 3.9
PAX6-275ENST00000640617 PRG4Q92954 1404 aaPredicted RBP39.38■■■■□ 3.89
PAX6-275ENST00000640617 KIF27Q86VH2 1401 aa39.26■■■■□ 3.88
PAX6-275ENST00000640617 IGF1RP08069 1367 aa39.26■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms