RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 NISCHQ9Y2I1 1504 aa36.16■■■■□ 3.38
GFAP-236ENST00000640545 CCDC180Q9P1Z9 1646 aa32.3■■■□□ 2.76
GFAP-236ENST00000640545 ABCC9O60706 1549 aa32.16■■■□□ 2.74
GFAP-236ENST00000640545 RB1CC1Q8TDY2 1594 aa30.72■■■□□ 2.51
GFAP-236ENST00000640545 DCAF8L2P0C7V8 631 aa30.63■■■□□ 2.49
GFAP-236ENST00000640545 NACADO15069 1562 aa30.57■■■□□ 2.48
GFAP-236ENST00000640545 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
GFAP-236ENST00000640545 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
GFAP-236ENST00000640545 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
GFAP-236ENST00000640545 DNAJC5BQ9UF47 199 aa29.94■■■□□ 2.38
GFAP-236ENST00000640545 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
GFAP-236ENST00000640545 UNC13AQ9UPW8 1703 aa29.83■■■□□ 2.37
GFAP-236ENST00000640545 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
GFAP-236ENST00000640545 SCRIBQ14160 1630 aa29.46■■■□□ 2.31
GFAP-236ENST00000640545 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
GFAP-236ENST00000640545 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
GFAP-236ENST00000640545 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
GFAP-236ENST00000640545 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
GFAP-236ENST00000640545 NCAPD3P42695 1498 aa28.22■■■□□ 2.11
GFAP-236ENST00000640545 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
GFAP-236ENST00000640545 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
GFAP-236ENST00000640545 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
GFAP-236ENST00000640545 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
GFAP-236ENST00000640545 HMGXB3Q12766 1538 aa27.99■■■□□ 2.07
GFAP-236ENST00000640545 BAZ1BQ9UIG0 1483 aaKnown RBP27.93■■■□□ 2.06
GFAP-236ENST00000640545 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
GFAP-236ENST00000640545 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
GFAP-236ENST00000640545 MROH2BQ7Z745 1585 aa27.83■■■□□ 2.05
GFAP-236ENST00000640545 CUX2O14529 1486 aa27.66■■■□□ 2.02
GFAP-236ENST00000640545 NESP48681 1621 aa27.63■■■□□ 2.01
GFAP-236ENST00000640545 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
GFAP-236ENST00000640545 WIZO95785 1651 aa27.48■■□□□ 1.99
GFAP-236ENST00000640545 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
GFAP-236ENST00000640545 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
GFAP-236ENST00000640545 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
GFAP-236ENST00000640545 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
GFAP-236ENST00000640545 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
GFAP-236ENST00000640545 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
GFAP-236ENST00000640545 TOP2AP11388 1531 aaKnown RBP27.2■■□□□ 1.94
GFAP-236ENST00000640545 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
GFAP-236ENST00000640545 CFTRP13569 1480 aa27.1■■□□□ 1.93
GFAP-236ENST00000640545 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
GFAP-236ENST00000640545 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
GFAP-236ENST00000640545 WDR62O43379 1518 aa27■■□□□ 1.91
GFAP-236ENST00000640545 CCDC88BA6NC98 1476 aa26.91■■□□□ 1.9
GFAP-236ENST00000640545 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
GFAP-236ENST00000640545 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
GFAP-236ENST00000640545 ABCC8Q09428 1581 aa26.61■■□□□ 1.85
GFAP-236ENST00000640545 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
GFAP-236ENST00000640545 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
GFAP-236ENST00000640545 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
GFAP-236ENST00000640545 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
GFAP-236ENST00000640545 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
GFAP-236ENST00000640545 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
GFAP-236ENST00000640545 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
GFAP-236ENST00000640545 POLA1P09884 1462 aaPredicted RBP26.29■■□□□ 1.8
GFAP-236ENST00000640545 SOGA1O94964 1423 aa26.26■■□□□ 1.79
GFAP-236ENST00000640545 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.79
GFAP-236ENST00000640545 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
GFAP-236ENST00000640545 TARBP1Q13395 1621 aaKnown RBP26.23■■□□□ 1.79
GFAP-236ENST00000640545 RAD54L2Q9Y4B4 1467 aa26.19■■□□□ 1.78
GFAP-236ENST00000640545 FBLN2P98095 1184 aa26.17■■□□□ 1.78
GFAP-236ENST00000640545 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
GFAP-236ENST00000640545 TDRD9Q8NDG6 1382 aaKnown RBP26.15■■□□□ 1.78
GFAP-236ENST00000640545 CUX1P39880 1505 aa26.14■■□□□ 1.77
GFAP-236ENST00000640545 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
GFAP-236ENST00000640545 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
GFAP-236ENST00000640545 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
GFAP-236ENST00000640545 RIMBP3CA6NJZ7 1639 aa25.98■■□□□ 1.75
GFAP-236ENST00000640545 RIMBP3BA6NNM3 1639 aa25.98■■□□□ 1.75
GFAP-236ENST00000640545 RIMBP3Q9UFD9 1639 aa25.98■■□□□ 1.75
GFAP-236ENST00000640545 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
GFAP-236ENST00000640545 CHD1O14646 1710 aa25.97■■□□□ 1.75
GFAP-236ENST00000640545 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
GFAP-236ENST00000640545 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
GFAP-236ENST00000640545 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
GFAP-236ENST00000640545 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
GFAP-236ENST00000640545 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
GFAP-236ENST00000640545 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.74
GFAP-236ENST00000640545 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
GFAP-236ENST00000640545 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
GFAP-236ENST00000640545 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
GFAP-236ENST00000640545 PBRM1Q86U86 1689 aa25.76■■□□□ 1.71
GFAP-236ENST00000640545 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
GFAP-236ENST00000640545 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
GFAP-236ENST00000640545 CLASP1Q7Z460 1538 aa25.72■■□□□ 1.71
GFAP-236ENST00000640545 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
GFAP-236ENST00000640545 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
GFAP-236ENST00000640545 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
GFAP-236ENST00000640545 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
GFAP-236ENST00000640545 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.68
GFAP-236ENST00000640545 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
GFAP-236ENST00000640545 NUP160Q12769 1436 aa25.51■■□□□ 1.67
GFAP-236ENST00000640545 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
GFAP-236ENST00000640545 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
GFAP-236ENST00000640545 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
GFAP-236ENST00000640545 IGF1RP08069 1367 aa25.33■■□□□ 1.65
GFAP-236ENST00000640545 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
GFAP-236ENST00000640545 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
GFAP-236ENST00000640545 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms