RNA–Protein interactions for RNA: ENST00000640423.1

GABRD-215, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 1,172 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-215ENST00000640423 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.44
GABRD-215ENST00000640423 CCDC180Q9P1Z9 1646 aa32.49■■■□□ 2.79
GABRD-215ENST00000640423 ABCC9O60706 1549 aa31.9■■■□□ 2.7
GABRD-215ENST00000640423 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
GABRD-215ENST00000640423 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
GABRD-215ENST00000640423 NACADO15069 1562 aa30.62■■■□□ 2.49
GABRD-215ENST00000640423 MYO15BQ96JP2 1530 aa30.43■■■□□ 2.46
GABRD-215ENST00000640423 ZCCHC6Q5VYS8 1495 aaKnown RBP30.43■■■□□ 2.46
GABRD-215ENST00000640423 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
GABRD-215ENST00000640423 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
GABRD-215ENST00000640423 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
GABRD-215ENST00000640423 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
GABRD-215ENST00000640423 SCRIBQ14160 1630 aa29.65■■■□□ 2.34
GABRD-215ENST00000640423 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
GABRD-215ENST00000640423 DNAJC5BQ9UF47 199 aa29.34■■■□□ 2.29
GABRD-215ENST00000640423 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
GABRD-215ENST00000640423 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
GABRD-215ENST00000640423 CECR2Q9BXF3 1484 aa28.7■■■□□ 2.18
GABRD-215ENST00000640423 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
GABRD-215ENST00000640423 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
GABRD-215ENST00000640423 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
GABRD-215ENST00000640423 ATAD2BQ9ULI0 1458 aa28.26■■■□□ 2.11
GABRD-215ENST00000640423 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
GABRD-215ENST00000640423 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
GABRD-215ENST00000640423 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
GABRD-215ENST00000640423 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
GABRD-215ENST00000640423 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
GABRD-215ENST00000640423 RSF1Q96T23 1441 aaPredicted RBP27.85■■■□□ 2.05
GABRD-215ENST00000640423 WIZO95785 1651 aa27.81■■■□□ 2.04
GABRD-215ENST00000640423 ERCC6Q03468 1493 aa27.57■■■□□ 2
GABRD-215ENST00000640423 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
GABRD-215ENST00000640423 NESP48681 1621 aa27.56■■■□□ 2
GABRD-215ENST00000640423 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
GABRD-215ENST00000640423 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
GABRD-215ENST00000640423 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
GABRD-215ENST00000640423 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
GABRD-215ENST00000640423 CUX2O14529 1486 aa27.27■■□□□ 1.96
GABRD-215ENST00000640423 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
GABRD-215ENST00000640423 CFTRP13569 1480 aa27.26■■□□□ 1.95
GABRD-215ENST00000640423 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
GABRD-215ENST00000640423 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
GABRD-215ENST00000640423 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
GABRD-215ENST00000640423 CEP164Q9UPV0 1460 aa27.11■■□□□ 1.93
GABRD-215ENST00000640423 MRC2Q9UBG0 1479 aa27.07■■□□□ 1.92
GABRD-215ENST00000640423 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
GABRD-215ENST00000640423 WDR62O43379 1518 aa26.95■■□□□ 1.91
GABRD-215ENST00000640423 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
GABRD-215ENST00000640423 ABCC8Q09428 1581 aa26.74■■□□□ 1.87
GABRD-215ENST00000640423 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
GABRD-215ENST00000640423 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
GABRD-215ENST00000640423 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
GABRD-215ENST00000640423 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
GABRD-215ENST00000640423 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
GABRD-215ENST00000640423 CUX1P39880 1505 aa26.42■■□□□ 1.82
GABRD-215ENST00000640423 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
GABRD-215ENST00000640423 SOGA1O94964 1423 aa26.39■■□□□ 1.81
GABRD-215ENST00000640423 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
GABRD-215ENST00000640423 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
GABRD-215ENST00000640423 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
GABRD-215ENST00000640423 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
GABRD-215ENST00000640423 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.8
GABRD-215ENST00000640423 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
GABRD-215ENST00000640423 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
GABRD-215ENST00000640423 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
GABRD-215ENST00000640423 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
GABRD-215ENST00000640423 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
GABRD-215ENST00000640423 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
GABRD-215ENST00000640423 WDR97A6NE52 1622 aa26.18■■□□□ 1.78
GABRD-215ENST00000640423 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
GABRD-215ENST00000640423 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
GABRD-215ENST00000640423 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
GABRD-215ENST00000640423 GAPVD1Q14C86 1478 aa26.05■■□□□ 1.76
GABRD-215ENST00000640423 FBLN2P98095 1184 aa26.05■■□□□ 1.76
GABRD-215ENST00000640423 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
GABRD-215ENST00000640423 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
GABRD-215ENST00000640423 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
GABRD-215ENST00000640423 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
GABRD-215ENST00000640423 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
GABRD-215ENST00000640423 CHD1O14646 1710 aa25.9■■□□□ 1.74
GABRD-215ENST00000640423 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
GABRD-215ENST00000640423 PBRM1Q86U86 1689 aa25.9■■□□□ 1.74
GABRD-215ENST00000640423 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
GABRD-215ENST00000640423 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
GABRD-215ENST00000640423 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
GABRD-215ENST00000640423 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
GABRD-215ENST00000640423 GRIN2AQ12879 1464 aa25.71■■□□□ 1.71
GABRD-215ENST00000640423 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
GABRD-215ENST00000640423 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
GABRD-215ENST00000640423 IGF1RP08069 1367 aa25.66■■□□□ 1.7
GABRD-215ENST00000640423 RIMBP3CA6NJZ7 1639 aa25.65■■□□□ 1.7
GABRD-215ENST00000640423 RIMBP3BA6NNM3 1639 aa25.65■■□□□ 1.7
GABRD-215ENST00000640423 RIMBP3Q9UFD9 1639 aa25.65■■□□□ 1.7
GABRD-215ENST00000640423 NUP160Q12769 1436 aa25.6■■□□□ 1.69
GABRD-215ENST00000640423 CUL7Q14999 1698 aa25.54■■□□□ 1.68
GABRD-215ENST00000640423 CEP170Q5SW79 1584 aa25.53■■□□□ 1.68
GABRD-215ENST00000640423 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
GABRD-215ENST00000640423 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
GABRD-215ENST00000640423 RUSC2Q8N2Y8 1516 aa25.5■■□□□ 1.67
GABRD-215ENST00000640423 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
GABRD-215ENST00000640423 EEA1Q15075 1411 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 208.6 ms