RNA–Protein interactions for RNA: ENST00000640317.1

GABRD-214, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-214ENST00000640317 NISCHQ9Y2I1 1504 aa50.34■■■■■ 5.65
GABRD-214ENST00000640317 CCDC180Q9P1Z9 1646 aa43.98■■■■■ 4.63
GABRD-214ENST00000640317 ZCCHC6Q5VYS8 1495 aaKnown RBP42.21■■■■■ 4.35
GABRD-214ENST00000640317 ABCC9O60706 1549 aa41.89■■■■■ 4.3
GABRD-214ENST00000640317 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
GABRD-214ENST00000640317 DCAF1Q9Y4B6 1507 aa41.62■■■■■ 4.25
GABRD-214ENST00000640317 MYO15BQ96JP2 1530 aa41.23■■■■■ 4.19
GABRD-214ENST00000640317 NACADO15069 1562 aa41.07■■■■■ 4.17
GABRD-214ENST00000640317 SHROOM4Q9ULL8 1493 aa40.87■■■■■ 4.13
GABRD-214ENST00000640317 RB1CC1Q8TDY2 1594 aa40.77■■■■■ 4.12
GABRD-214ENST00000640317 SCRIBQ14160 1630 aa40.42■■■■■ 4.06
GABRD-214ENST00000640317 UNC13AQ9UPW8 1703 aa39.9■■■■□ 3.98
GABRD-214ENST00000640317 BICRAQ9NZM4 1560 aa39.56■■■■□ 3.92
GABRD-214ENST00000640317 PABPN1Q86U42 306 aaKnown RBP eCLIP39.5■■■■□ 3.91
GABRD-214ENST00000640317 SUPT5HO00267 1087 aaKnown RBP39.21■■■■□ 3.87
GABRD-214ENST00000640317 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
GABRD-214ENST00000640317 RSF1Q96T23 1441 aaPredicted RBP38.96■■■■□ 3.83
GABRD-214ENST00000640317 MROH2BQ7Z745 1585 aa38.88■■■■□ 3.81
GABRD-214ENST00000640317 BAZ1AQ9NRL2 1556 aaPredicted RBP38.87■■■■□ 3.81
GABRD-214ENST00000640317 SMARCA4P51532 1647 aa38.73■■■■□ 3.79
GABRD-214ENST00000640317 WIZO95785 1651 aa38.53■■■■□ 3.76
GABRD-214ENST00000640317 EIF4G1Q04637 1599 aaKnown RBP38.38■■■■□ 3.73
GABRD-214ENST00000640317 PEG3Q9GZU2 1588 aa38.28■■■■□ 3.72
GABRD-214ENST00000640317 ATAD2BQ9ULI0 1458 aa38.21■■■■□ 3.71
GABRD-214ENST00000640317 SMARCA2P51531 1590 aa38.15■■■■□ 3.7
GABRD-214ENST00000640317 TOP2AP11388 1531 aaKnown RBP38.13■■■■□ 3.69
GABRD-214ENST00000640317 BAZ1BQ9UIG0 1483 aaKnown RBP37.95■■■■□ 3.67
GABRD-214ENST00000640317 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
GABRD-214ENST00000640317 CC2D2AQ9P2K1 1620 aa37.89■■■■□ 3.66
GABRD-214ENST00000640317 HMGXB3Q12766 1538 aa37.81■■■■□ 3.64
GABRD-214ENST00000640317 CCDC88BA6NC98 1476 aa37.77■■■■□ 3.64
GABRD-214ENST00000640317 CHIC1Q5VXU3 224 aa37.4■■■■□ 3.58
GABRD-214ENST00000640317 DNAJC5BQ9UF47 199 aa37.27■■■■□ 3.56
GABRD-214ENST00000640317 CFTRP13569 1480 aa37■■■■□ 3.51
GABRD-214ENST00000640317 CADPSQ9ULU8 1353 aa36.95■■■■□ 3.51
GABRD-214ENST00000640317 TRIM41Q8WV44 630 aa36.89■■■■□ 3.5
GABRD-214ENST00000640317 ABCC8Q09428 1581 aa36.84■■■■□ 3.49
GABRD-214ENST00000640317 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
GABRD-214ENST00000640317 NESP48681 1621 aa36.69■■■■□ 3.46
GABRD-214ENST00000640317 WRNQ14191 1432 aaPredicted RBP eCLIP36.66■■■■□ 3.46
GABRD-214ENST00000640317 LAMC3Q9Y6N6 1575 aa36.65■■■■□ 3.46
GABRD-214ENST00000640317 FANCD2Q9BXW9 1451 aa36.51■■■■□ 3.44
GABRD-214ENST00000640317 SYNJ1O43426 1573 aa36.5■■■■□ 3.43
GABRD-214ENST00000640317 PDS5BQ9NTI5 1447 aa36.42■■■■□ 3.42
GABRD-214ENST00000640317 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
GABRD-214ENST00000640317 CUX1P39880 1505 aa36.37■■■■□ 3.41
GABRD-214ENST00000640317 BIVM-ERCC5R4GMW8 1640 aa36.33■■■■□ 3.41
GABRD-214ENST00000640317 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
GABRD-214ENST00000640317 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
GABRD-214ENST00000640317 FAM9AQ8IZU1 332 aaPredicted RBP36.2■■■■□ 3.39
GABRD-214ENST00000640317 SOGA1O94964 1423 aa36.13■■■■□ 3.37
GABRD-214ENST00000640317 DNMBPQ6XZF7 1577 aa36.12■■■■□ 3.37
GABRD-214ENST00000640317 TOPBP1Q92547 1522 aa36.09■■■■□ 3.37
GABRD-214ENST00000640317 URB2Q14146 1524 aaKnown RBP36.07■■■■□ 3.37
GABRD-214ENST00000640317 RUSC2Q8N2Y8 1516 aa36.01■■■■□ 3.36
GABRD-214ENST00000640317 FGD5Q6ZNL6 1462 aa36.01■■■■□ 3.36
GABRD-214ENST00000640317 EEA1Q15075 1411 aa35.98■■■■□ 3.35
GABRD-214ENST00000640317 LOC105371045A0A1W2PR82 267 aa35.96■■■■□ 3.35
GABRD-214ENST00000640317 MRC2Q9UBG0 1479 aa35.95■■■■□ 3.34
GABRD-214ENST00000640317 ERCC6Q03468 1493 aa35.94■■■■□ 3.34
GABRD-214ENST00000640317 POLA1P09884 1462 aaPredicted RBP35.89■■■■□ 3.34
GABRD-214ENST00000640317 CSRNP3Q8WYN3 585 aa35.87■■■■□ 3.33
GABRD-214ENST00000640317 RAD54L2Q9Y4B4 1467 aa35.79■■■■□ 3.32
GABRD-214ENST00000640317 KIF27Q86VH2 1401 aa35.77■■■■□ 3.32
GABRD-214ENST00000640317 WDR62O43379 1518 aa35.75■■■■□ 3.31
GABRD-214ENST00000640317 CUX2O14529 1486 aa35.74■■■■□ 3.31
GABRD-214ENST00000640317 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.3
GABRD-214ENST00000640317 ABCA10Q8WWZ4 1543 aa35.7■■■■□ 3.3
GABRD-214ENST00000640317 EHMT2Q96KQ7 1210 aa35.69■■■■□ 3.3
GABRD-214ENST00000640317 WDR97A6NE52 1622 aa35.56■■■■□ 3.28
GABRD-214ENST00000640317 TARBP1Q13395 1621 aaKnown RBP35.56■■■■□ 3.28
GABRD-214ENST00000640317 IGF1RP08069 1367 aa35.52■■■■□ 3.28
GABRD-214ENST00000640317 KIF21BO75037 1637 aa35.5■■■■□ 3.27
GABRD-214ENST00000640317 TDRD9Q8NDG6 1382 aaKnown RBP35.48■■■■□ 3.27
GABRD-214ENST00000640317 GOLGA3Q08378 1498 aa35.47■■■■□ 3.27
GABRD-214ENST00000640317 IFT140Q96RY7 1462 aa35.47■■■■□ 3.27
GABRD-214ENST00000640317 PRXQ9BXM0 1461 aa35.46■■■■□ 3.27
GABRD-214ENST00000640317 ABCA5Q8WWZ7 1642 aa35.4■■■■□ 3.26
GABRD-214ENST00000640317 RAPGEF2Q9Y4G8 1499 aa35.39■■■■□ 3.26
GABRD-214ENST00000640317 GAPVD1Q14C86 1478 aa35.38■■■■□ 3.25
GABRD-214ENST00000640317 UBTFP17480 764 aaKnown RBP35.37■■■■□ 3.25
GABRD-214ENST00000640317 TNIKQ9UKE5 1360 aa35.33■■■■□ 3.25
GABRD-214ENST00000640317 ERICH3Q5RHP9 1530 aa35.33■■■■□ 3.25
GABRD-214ENST00000640317 CARMIL1Q5VZK9 1371 aa35.33■■■■□ 3.25
GABRD-214ENST00000640317 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.24
GABRD-214ENST00000640317 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
GABRD-214ENST00000640317 CUL7Q14999 1698 aa35.19■■■■□ 3.22
GABRD-214ENST00000640317 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
GABRD-214ENST00000640317 PBRM1Q86U86 1689 aa35.14■■■■□ 3.22
GABRD-214ENST00000640317 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
GABRD-214ENST00000640317 CEP162Q5TB80 1403 aa35.09■■■■□ 3.21
GABRD-214ENST00000640317 FHAD1B1AJZ9 1412 aa35■■■■□ 3.19
GABRD-214ENST00000640317 ADAMTS12P58397 1594 aa34.96■■■■□ 3.19
GABRD-214ENST00000640317 SNAPC4Q5SXM2 1469 aa34.94■■■■□ 3.18
GABRD-214ENST00000640317 CLIP1P30622 1438 aa34.9■■■■□ 3.18
GABRD-214ENST00000640317 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
GABRD-214ENST00000640317 RANGAP1P46060 587 aaPredicted RBP34.87■■■■□ 3.17
GABRD-214ENST00000640317 SYNJ2O15056 1496 aa34.74■■■■□ 3.15
GABRD-214ENST00000640317 CTTNBP2Q8WZ74 1663 aa34.73■■■■□ 3.15
GABRD-214ENST00000640317 CHMP7Q8WUX9 453 aaPredicted RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms