RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 NISCHQ9Y2I1 1504 aa26.46■■□□□ 1.83
HNRNPU-227ENST00000640264 ABCC9O60706 1549 aa24.13■■□□□ 1.45
HNRNPU-227ENST00000640264 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
HNRNPU-227ENST00000640264 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
HNRNPU-227ENST00000640264 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
HNRNPU-227ENST00000640264 NACADO15069 1562 aa22.65■■□□□ 1.22
HNRNPU-227ENST00000640264 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
HNRNPU-227ENST00000640264 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
HNRNPU-227ENST00000640264 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
HNRNPU-227ENST00000640264 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
HNRNPU-227ENST00000640264 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
HNRNPU-227ENST00000640264 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
HNRNPU-227ENST00000640264 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
HNRNPU-227ENST00000640264 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
HNRNPU-227ENST00000640264 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
HNRNPU-227ENST00000640264 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
HNRNPU-227ENST00000640264 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
HNRNPU-227ENST00000640264 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
HNRNPU-227ENST00000640264 DNAJC5Q9H3Z4 198 aa21.23■□□□□ 0.99
HNRNPU-227ENST00000640264 CUX2O14529 1486 aa20.93■□□□□ 0.94
HNRNPU-227ENST00000640264 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
HNRNPU-227ENST00000640264 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
HNRNPU-227ENST00000640264 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
HNRNPU-227ENST00000640264 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
HNRNPU-227ENST00000640264 HMGXB3Q12766 1538 aa20.71■□□□□ 0.91
HNRNPU-227ENST00000640264 SMARCA4P51532 1647 aa20.7■□□□□ 0.9
HNRNPU-227ENST00000640264 NESP48681 1621 aa20.64■□□□□ 0.89
HNRNPU-227ENST00000640264 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
HNRNPU-227ENST00000640264 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
HNRNPU-227ENST00000640264 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
HNRNPU-227ENST00000640264 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
HNRNPU-227ENST00000640264 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
HNRNPU-227ENST00000640264 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
HNRNPU-227ENST00000640264 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
HNRNPU-227ENST00000640264 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
HNRNPU-227ENST00000640264 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
HNRNPU-227ENST00000640264 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
HNRNPU-227ENST00000640264 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
HNRNPU-227ENST00000640264 WDR62O43379 1518 aa20.16■□□□□ 0.82
HNRNPU-227ENST00000640264 WIZO95785 1651 aa20.13■□□□□ 0.81
HNRNPU-227ENST00000640264 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.81
HNRNPU-227ENST00000640264 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
HNRNPU-227ENST00000640264 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
HNRNPU-227ENST00000640264 CFTRP13569 1480 aa19.96■□□□□ 0.79
HNRNPU-227ENST00000640264 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
HNRNPU-227ENST00000640264 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
HNRNPU-227ENST00000640264 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
HNRNPU-227ENST00000640264 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
HNRNPU-227ENST00000640264 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
HNRNPU-227ENST00000640264 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
HNRNPU-227ENST00000640264 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
HNRNPU-227ENST00000640264 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
HNRNPU-227ENST00000640264 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
HNRNPU-227ENST00000640264 CCDC88BA6NC98 1476 aa19.64■□□□□ 0.73
HNRNPU-227ENST00000640264 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
HNRNPU-227ENST00000640264 ABCC8Q09428 1581 aa19.59■□□□□ 0.73
HNRNPU-227ENST00000640264 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
HNRNPU-227ENST00000640264 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
HNRNPU-227ENST00000640264 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.71
HNRNPU-227ENST00000640264 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
HNRNPU-227ENST00000640264 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.718e-19■□□□□ 9.3
HNRNPU-227ENST00000640264 CHD1O14646 1710 aa19.46■□□□□ 0.71
HNRNPU-227ENST00000640264 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
HNRNPU-227ENST00000640264 FBLN2P98095 1184 aa19.43■□□□□ 0.7
HNRNPU-227ENST00000640264 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
HNRNPU-227ENST00000640264 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
HNRNPU-227ENST00000640264 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
HNRNPU-227ENST00000640264 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
HNRNPU-227ENST00000640264 SOGA1O94964 1423 aa19.32■□□□□ 0.68
HNRNPU-227ENST00000640264 TDRD9Q8NDG6 1382 aaKnown RBP19.31■□□□□ 0.68
HNRNPU-227ENST00000640264 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
HNRNPU-227ENST00000640264 SNAPC4Q5SXM2 1469 aa19.25■□□□□ 0.67
HNRNPU-227ENST00000640264 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
HNRNPU-227ENST00000640264 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
HNRNPU-227ENST00000640264 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
HNRNPU-227ENST00000640264 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
HNRNPU-227ENST00000640264 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
HNRNPU-227ENST00000640264 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
HNRNPU-227ENST00000640264 CUX1P39880 1505 aa19.16■□□□□ 0.66
HNRNPU-227ENST00000640264 SYNJ2O15056 1496 aa19.14■□□□□ 0.65
HNRNPU-227ENST00000640264 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
HNRNPU-227ENST00000640264 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
HNRNPU-227ENST00000640264 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
HNRNPU-227ENST00000640264 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
HNRNPU-227ENST00000640264 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
HNRNPU-227ENST00000640264 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
HNRNPU-227ENST00000640264 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
HNRNPU-227ENST00000640264 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
HNRNPU-227ENST00000640264 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
HNRNPU-227ENST00000640264 NUP160Q12769 1436 aa18.86■□□□□ 0.61
HNRNPU-227ENST00000640264 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
HNRNPU-227ENST00000640264 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.6
HNRNPU-227ENST00000640264 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
HNRNPU-227ENST00000640264 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
HNRNPU-227ENST00000640264 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
HNRNPU-227ENST00000640264 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
HNRNPU-227ENST00000640264 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
HNRNPU-227ENST00000640264 PRG4Q92954 1404 aaPredicted RBP18.72■□□□□ 0.59
HNRNPU-227ENST00000640264 KIF13AQ9H1H9 1805 aa18.71■□□□□ 0.59
HNRNPU-227ENST00000640264 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms