RNA–Protein interactions for RNA: ENST00000640174.1

STRADA-244, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-244ENST00000640174 NISCHQ9Y2I1 1504 aa37.54■■■■□ 3.6
STRADA-244ENST00000640174 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
STRADA-244ENST00000640174 ABCC9O60706 1549 aa33.67■■■□□ 2.98
STRADA-244ENST00000640174 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
STRADA-244ENST00000640174 NACADO15069 1562 aa31.93■■■□□ 2.7
STRADA-244ENST00000640174 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
STRADA-244ENST00000640174 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
STRADA-244ENST00000640174 DNAJC5BQ9UF47 199 aa31.52■■■□□ 2.64
STRADA-244ENST00000640174 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
STRADA-244ENST00000640174 UNC13AQ9UPW8 1703 aa31.25■■■□□ 2.59
STRADA-244ENST00000640174 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
STRADA-244ENST00000640174 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
STRADA-244ENST00000640174 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
STRADA-244ENST00000640174 SHROOM4Q9ULL8 1493 aa30.88■■■□□ 2.53
STRADA-244ENST00000640174 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
STRADA-244ENST00000640174 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
STRADA-244ENST00000640174 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
STRADA-244ENST00000640174 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
STRADA-244ENST00000640174 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
STRADA-244ENST00000640174 ATAD2BQ9ULI0 1458 aa29.32■■■□□ 2.28
STRADA-244ENST00000640174 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
STRADA-244ENST00000640174 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
STRADA-244ENST00000640174 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
STRADA-244ENST00000640174 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
STRADA-244ENST00000640174 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
STRADA-244ENST00000640174 CUX2O14529 1486 aa29.15■■■□□ 2.26
STRADA-244ENST00000640174 DNAJC5Q9H3Z4 198 aa29.1■■■□□ 2.25
STRADA-244ENST00000640174 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
STRADA-244ENST00000640174 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
STRADA-244ENST00000640174 NESP48681 1621 aa28.87■■■□□ 2.21
STRADA-244ENST00000640174 MROH2BQ7Z745 1585 aa28.87■■■□□ 2.21
STRADA-244ENST00000640174 LAMC3Q9Y6N6 1575 aa28.8■■■□□ 2.2
STRADA-244ENST00000640174 PDS5BQ9NTI5 1447 aa28.68■■■□□ 2.18
STRADA-244ENST00000640174 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
STRADA-244ENST00000640174 CADPSQ9ULU8 1353 aa28.56■■■□□ 2.16
STRADA-244ENST00000640174 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.15
STRADA-244ENST00000640174 WIZO95785 1651 aa28.5■■■□□ 2.15
STRADA-244ENST00000640174 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
STRADA-244ENST00000640174 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
STRADA-244ENST00000640174 WDR62O43379 1518 aa28.29■■■□□ 2.12
STRADA-244ENST00000640174 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
STRADA-244ENST00000640174 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
STRADA-244ENST00000640174 CFTRP13569 1480 aa28.22■■■□□ 2.11
STRADA-244ENST00000640174 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
STRADA-244ENST00000640174 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
STRADA-244ENST00000640174 PRDM2Q13029 1718 aa27.89■■■□□ 2.05
STRADA-244ENST00000640174 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
STRADA-244ENST00000640174 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
STRADA-244ENST00000640174 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
STRADA-244ENST00000640174 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
STRADA-244ENST00000640174 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
STRADA-244ENST00000640174 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
STRADA-244ENST00000640174 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
STRADA-244ENST00000640174 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
STRADA-244ENST00000640174 EIF4G3O43432 1585 aaKnown RBP27.45■■□□□ 1.99
STRADA-244ENST00000640174 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
STRADA-244ENST00000640174 POLA1P09884 1462 aaPredicted RBP27.37■■□□□ 1.97
STRADA-244ENST00000640174 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
STRADA-244ENST00000640174 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
STRADA-244ENST00000640174 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
STRADA-244ENST00000640174 AQRO60306 1485 aaKnown RBP eCLIP27.34■■□□□ 1.973e-6■■□□□ 13.8
STRADA-244ENST00000640174 ARHGEF11O15085 1522 aa27.29■■□□□ 1.96
STRADA-244ENST00000640174 SOGA1O94964 1423 aa27.27■■□□□ 1.96
STRADA-244ENST00000640174 WDR97A6NE52 1622 aa27.24■■□□□ 1.95
STRADA-244ENST00000640174 RAD54L2Q9Y4B4 1467 aa27.22■■□□□ 1.95
STRADA-244ENST00000640174 FBLN2P98095 1184 aa27.21■■□□□ 1.95
STRADA-244ENST00000640174 CHD1O14646 1710 aa27.21■■□□□ 1.95
STRADA-244ENST00000640174 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
STRADA-244ENST00000640174 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
STRADA-244ENST00000640174 CUX1P39880 1505 aa27.13■■□□□ 1.93
STRADA-244ENST00000640174 CYB5RLQ6IPT4 315 aa27.1■■□□□ 1.93
STRADA-244ENST00000640174 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
STRADA-244ENST00000640174 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
STRADA-244ENST00000640174 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
STRADA-244ENST00000640174 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
STRADA-244ENST00000640174 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
STRADA-244ENST00000640174 SYNJ1O43426 1573 aa27■■□□□ 1.91
STRADA-244ENST00000640174 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
STRADA-244ENST00000640174 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
STRADA-244ENST00000640174 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
STRADA-244ENST00000640174 CLASP1Q7Z460 1538 aa26.94■■□□□ 1.9
STRADA-244ENST00000640174 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
STRADA-244ENST00000640174 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
STRADA-244ENST00000640174 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
STRADA-244ENST00000640174 ABCA5Q8WWZ7 1642 aa26.84■■□□□ 1.89
STRADA-244ENST00000640174 TRHP20396 242 aaPredicted RBP26.84■■□□□ 1.89
STRADA-244ENST00000640174 TOP2BQ02880 1626 aa26.74■■□□□ 1.87
STRADA-244ENST00000640174 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
STRADA-244ENST00000640174 GRIN2AQ12879 1464 aa26.69■■□□□ 1.86
STRADA-244ENST00000640174 ADAMTS12P58397 1594 aa26.64■■□□□ 1.86
STRADA-244ENST00000640174 FHAD1B1AJZ9 1412 aa26.63■■□□□ 1.85
STRADA-244ENST00000640174 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
STRADA-244ENST00000640174 NUP160Q12769 1436 aa26.6■■□□□ 1.85
STRADA-244ENST00000640174 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
STRADA-244ENST00000640174 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
STRADA-244ENST00000640174 ERCC6L2Q5T890 1561 aa26.43■■□□□ 1.82
STRADA-244ENST00000640174 PRG4Q92954 1404 aaPredicted RBP26.34■■□□□ 1.81
STRADA-244ENST00000640174 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
STRADA-244ENST00000640174 KIF27Q86VH2 1401 aa26.28■■□□□ 1.8
STRADA-244ENST00000640174 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms