RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 NISCHQ9Y2I1 1504 aa38.24■■■■□ 3.71
SPIN3-233ENST00000640039 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.03
SPIN3-233ENST00000640039 ABCC9O60706 1549 aa33.63■■■□□ 2.97
SPIN3-233ENST00000640039 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
SPIN3-233ENST00000640039 DCAF8L2P0C7V8 631 aa31.99■■■□□ 2.71
SPIN3-233ENST00000640039 NACADO15069 1562 aa31.95■■■□□ 2.71
SPIN3-233ENST00000640039 ZCCHC6Q5VYS8 1495 aaKnown RBP31.87■■■□□ 2.69
SPIN3-233ENST00000640039 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
SPIN3-233ENST00000640039 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
SPIN3-233ENST00000640039 DCAF1Q9Y4B6 1507 aa31.64■■■□□ 2.66
SPIN3-233ENST00000640039 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
SPIN3-233ENST00000640039 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
SPIN3-233ENST00000640039 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
SPIN3-233ENST00000640039 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
SPIN3-233ENST00000640039 SHROOM4Q9ULL8 1493 aa30.69■■■□□ 2.5
SPIN3-233ENST00000640039 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
SPIN3-233ENST00000640039 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
SPIN3-233ENST00000640039 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
SPIN3-233ENST00000640039 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
SPIN3-233ENST00000640039 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
SPIN3-233ENST00000640039 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
SPIN3-233ENST00000640039 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
SPIN3-233ENST00000640039 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
SPIN3-233ENST00000640039 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
SPIN3-233ENST00000640039 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
SPIN3-233ENST00000640039 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
SPIN3-233ENST00000640039 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
SPIN3-233ENST00000640039 WIZO95785 1651 aa29.17■■■□□ 2.26
SPIN3-233ENST00000640039 RSF1Q96T23 1441 aaPredicted RBP29.14■■■□□ 2.26
SPIN3-233ENST00000640039 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
SPIN3-233ENST00000640039 CUX2O14529 1486 aa29■■■□□ 2.23
SPIN3-233ENST00000640039 ERCC6Q03468 1493 aa28.99■■■□□ 2.23
SPIN3-233ENST00000640039 NESP48681 1621 aa28.92■■■□□ 2.22
SPIN3-233ENST00000640039 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
SPIN3-233ENST00000640039 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
SPIN3-233ENST00000640039 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
SPIN3-233ENST00000640039 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
SPIN3-233ENST00000640039 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
SPIN3-233ENST00000640039 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.16
SPIN3-233ENST00000640039 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
SPIN3-233ENST00000640039 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
SPIN3-233ENST00000640039 CFTRP13569 1480 aa28.45■■■□□ 2.14
SPIN3-233ENST00000640039 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
SPIN3-233ENST00000640039 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
SPIN3-233ENST00000640039 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
SPIN3-233ENST00000640039 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
SPIN3-233ENST00000640039 WDR62O43379 1518 aa28.23■■■□□ 2.11
SPIN3-233ENST00000640039 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
SPIN3-233ENST00000640039 ABCC8Q09428 1581 aa27.87■■■□□ 2.05
SPIN3-233ENST00000640039 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
SPIN3-233ENST00000640039 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
SPIN3-233ENST00000640039 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
SPIN3-233ENST00000640039 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
SPIN3-233ENST00000640039 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
SPIN3-233ENST00000640039 CUX1P39880 1505 aa27.65■■■□□ 2.02
SPIN3-233ENST00000640039 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
SPIN3-233ENST00000640039 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
SPIN3-233ENST00000640039 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
SPIN3-233ENST00000640039 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
SPIN3-233ENST00000640039 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
SPIN3-233ENST00000640039 SOGA1O94964 1423 aa27.51■■□□□ 1.99
SPIN3-233ENST00000640039 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
SPIN3-233ENST00000640039 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
SPIN3-233ENST00000640039 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
SPIN3-233ENST00000640039 EIF4G3O43432 1585 aaKnown RBP27.43■■□□□ 1.98
SPIN3-233ENST00000640039 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
SPIN3-233ENST00000640039 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
SPIN3-233ENST00000640039 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
SPIN3-233ENST00000640039 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
SPIN3-233ENST00000640039 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
SPIN3-233ENST00000640039 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
SPIN3-233ENST00000640039 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
SPIN3-233ENST00000640039 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
SPIN3-233ENST00000640039 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
SPIN3-233ENST00000640039 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
SPIN3-233ENST00000640039 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
SPIN3-233ENST00000640039 CHD1O14646 1710 aa27.19■■□□□ 1.94
SPIN3-233ENST00000640039 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
SPIN3-233ENST00000640039 PBRM1Q86U86 1689 aa27.15■■□□□ 1.94
SPIN3-233ENST00000640039 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
SPIN3-233ENST00000640039 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
SPIN3-233ENST00000640039 FBLN2P98095 1184 aa27.09■■□□□ 1.93
SPIN3-233ENST00000640039 CHMP7Q8WUX9 453 aaPredicted RBP27.02■■□□□ 1.92
SPIN3-233ENST00000640039 SYNJ2O15056 1496 aa27■■□□□ 1.91
SPIN3-233ENST00000640039 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
SPIN3-233ENST00000640039 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
SPIN3-233ENST00000640039 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
SPIN3-233ENST00000640039 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
SPIN3-233ENST00000640039 CLASP1Q7Z460 1538 aa26.93■■□□□ 1.9
SPIN3-233ENST00000640039 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
SPIN3-233ENST00000640039 FHAD1B1AJZ9 1412 aa26.89■■□□□ 1.89
SPIN3-233ENST00000640039 GRIN2AQ12879 1464 aa26.83■■□□□ 1.89
SPIN3-233ENST00000640039 IGF1RP08069 1367 aa26.78■■□□□ 1.88
SPIN3-233ENST00000640039 CUL7Q14999 1698 aa26.77■■□□□ 1.88
SPIN3-233ENST00000640039 NUP160Q12769 1436 aa26.7■■□□□ 1.86
SPIN3-233ENST00000640039 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
SPIN3-233ENST00000640039 CARMIL1Q5VZK9 1371 aa26.67■■□□□ 1.86
SPIN3-233ENST00000640039 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
SPIN3-233ENST00000640039 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
SPIN3-233ENST00000640039 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms