RNA–Protein interactions for RNA: ENST00000639935.1

GABRD-211, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 2

Gene GABRD, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-211ENST00000639935 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
GABRD-211ENST00000639935 ABCC9O60706 1549 aa32.5■■■□□ 2.79
GABRD-211ENST00000639935 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
GABRD-211ENST00000639935 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
GABRD-211ENST00000639935 RB1CC1Q8TDY2 1594 aa30.76■■■□□ 2.52
GABRD-211ENST00000639935 NACADO15069 1562 aa30.47■■■□□ 2.47
GABRD-211ENST00000639935 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
GABRD-211ENST00000639935 UNC13AQ9UPW8 1703 aa30.09■■■□□ 2.41
GABRD-211ENST00000639935 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
GABRD-211ENST00000639935 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
GABRD-211ENST00000639935 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
GABRD-211ENST00000639935 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
GABRD-211ENST00000639935 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
GABRD-211ENST00000639935 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
GABRD-211ENST00000639935 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
GABRD-211ENST00000639935 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
GABRD-211ENST00000639935 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
GABRD-211ENST00000639935 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
GABRD-211ENST00000639935 DNAJC5Q9H3Z4 198 aa28.61■■■□□ 2.17
GABRD-211ENST00000639935 CUX2O14529 1486 aa28.2■■■□□ 2.1
GABRD-211ENST00000639935 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
GABRD-211ENST00000639935 ERCC6Q03468 1493 aa28.04■■■□□ 2.08
GABRD-211ENST00000639935 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
GABRD-211ENST00000639935 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
GABRD-211ENST00000639935 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
GABRD-211ENST00000639935 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
GABRD-211ENST00000639935 NESP48681 1621 aa27.83■■■□□ 2.05
GABRD-211ENST00000639935 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
GABRD-211ENST00000639935 THOC2Q8NI27 1593 aaKnown RBP27.68■■■□□ 2.02
GABRD-211ENST00000639935 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
GABRD-211ENST00000639935 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
GABRD-211ENST00000639935 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
GABRD-211ENST00000639935 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
GABRD-211ENST00000639935 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
GABRD-211ENST00000639935 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
GABRD-211ENST00000639935 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
GABRD-211ENST00000639935 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
GABRD-211ENST00000639935 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.95
GABRD-211ENST00000639935 WDR62O43379 1518 aa27.19■■□□□ 1.94
GABRD-211ENST00000639935 WIZO95785 1651 aa27.15■■□□□ 1.94
GABRD-211ENST00000639935 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
GABRD-211ENST00000639935 CEP164Q9UPV0 1460 aa27■■□□□ 1.91
GABRD-211ENST00000639935 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
GABRD-211ENST00000639935 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
GABRD-211ENST00000639935 CFTRP13569 1480 aa26.88■■□□□ 1.89
GABRD-211ENST00000639935 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
GABRD-211ENST00000639935 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
GABRD-211ENST00000639935 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
GABRD-211ENST00000639935 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
GABRD-211ENST00000639935 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
GABRD-211ENST00000639935 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
GABRD-211ENST00000639935 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
GABRD-211ENST00000639935 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
GABRD-211ENST00000639935 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
GABRD-211ENST00000639935 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
GABRD-211ENST00000639935 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
GABRD-211ENST00000639935 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
GABRD-211ENST00000639935 EIF4G3O43432 1585 aaKnown RBP26.35■■□□□ 1.81
GABRD-211ENST00000639935 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
GABRD-211ENST00000639935 DNMBPQ6XZF7 1577 aa26.27■■□□□ 1.8
GABRD-211ENST00000639935 TARBP1Q13395 1621 aaKnown RBP26.23■■□□□ 1.79
GABRD-211ENST00000639935 CHD1O14646 1710 aa26.19■■□□□ 1.78
GABRD-211ENST00000639935 AQRO60306 1485 aaKnown RBP eCLIP26.18■■□□□ 1.78
GABRD-211ENST00000639935 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
GABRD-211ENST00000639935 CYB5RLQ6IPT4 315 aa26.15■■□□□ 1.78
GABRD-211ENST00000639935 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
GABRD-211ENST00000639935 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
GABRD-211ENST00000639935 FBLN2P98095 1184 aa25.98■■□□□ 1.75
GABRD-211ENST00000639935 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
GABRD-211ENST00000639935 CLASP1Q7Z460 1538 aa25.94■■□□□ 1.74
GABRD-211ENST00000639935 TRHP20396 242 aaPredicted RBP25.94■■□□□ 1.74
GABRD-211ENST00000639935 SOGA1O94964 1423 aa25.93■■□□□ 1.74
GABRD-211ENST00000639935 SNAPC4Q5SXM2 1469 aa25.92■■□□□ 1.74
GABRD-211ENST00000639935 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
GABRD-211ENST00000639935 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
GABRD-211ENST00000639935 MAGI1Q96QZ7 1491 aaPredicted RBP25.82■■□□□ 1.72
GABRD-211ENST00000639935 CUX1P39880 1505 aa25.82■■□□□ 1.72
GABRD-211ENST00000639935 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
GABRD-211ENST00000639935 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
GABRD-211ENST00000639935 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
GABRD-211ENST00000639935 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
GABRD-211ENST00000639935 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
GABRD-211ENST00000639935 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
GABRD-211ENST00000639935 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
GABRD-211ENST00000639935 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
GABRD-211ENST00000639935 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
GABRD-211ENST00000639935 BIVM-ERCC5R4GMW8 1640 aa25.59■■□□□ 1.69
GABRD-211ENST00000639935 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
GABRD-211ENST00000639935 ERCC6L2Q5T890 1561 aa25.5■■□□□ 1.67
GABRD-211ENST00000639935 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
GABRD-211ENST00000639935 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
GABRD-211ENST00000639935 ADAMTS12P58397 1594 aa25.43■■□□□ 1.66
GABRD-211ENST00000639935 NUP160Q12769 1436 aa25.42■■□□□ 1.66
GABRD-211ENST00000639935 CEP170Q5SW79 1584 aa25.41■■□□□ 1.66
GABRD-211ENST00000639935 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
GABRD-211ENST00000639935 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
GABRD-211ENST00000639935 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
GABRD-211ENST00000639935 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
GABRD-211ENST00000639935 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
GABRD-211ENST00000639935 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms