RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-229ENST00000639809 NISCHQ9Y2I1 1504 aa39.71■■■■□ 3.95
SPIN3-229ENST00000639809 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
SPIN3-229ENST00000639809 ABCC9O60706 1549 aa35.67■■■■□ 3.3
SPIN3-229ENST00000639809 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
SPIN3-229ENST00000639809 NACADO15069 1562 aa33.81■■■■□ 3
SPIN3-229ENST00000639809 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
SPIN3-229ENST00000639809 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
SPIN3-229ENST00000639809 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
SPIN3-229ENST00000639809 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
SPIN3-229ENST00000639809 UNC13AQ9UPW8 1703 aa33.13■■■□□ 2.89
SPIN3-229ENST00000639809 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
SPIN3-229ENST00000639809 ZCCHC6Q5VYS8 1495 aaKnown RBP32.9■■■□□ 2.86
SPIN3-229ENST00000639809 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
SPIN3-229ENST00000639809 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
SPIN3-229ENST00000639809 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
SPIN3-229ENST00000639809 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
SPIN3-229ENST00000639809 CECR2Q9BXF3 1484 aa32.21■■■□□ 2.75
SPIN3-229ENST00000639809 EIF4G1Q04637 1599 aaKnown RBP32.19■■■□□ 2.74
SPIN3-229ENST00000639809 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
SPIN3-229ENST00000639809 ATAD2BQ9ULI0 1458 aa31.05■■■□□ 2.56
SPIN3-229ENST00000639809 SMARCA2P51531 1590 aa31.01■■■□□ 2.56
SPIN3-229ENST00000639809 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
SPIN3-229ENST00000639809 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
SPIN3-229ENST00000639809 DNAJC5Q9H3Z4 198 aa30.95■■■□□ 2.55
SPIN3-229ENST00000639809 CUX2O14529 1486 aa30.93■■■□□ 2.54
SPIN3-229ENST00000639809 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
SPIN3-229ENST00000639809 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
SPIN3-229ENST00000639809 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
SPIN3-229ENST00000639809 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
SPIN3-229ENST00000639809 NESP48681 1621 aa30.6■■■□□ 2.49
SPIN3-229ENST00000639809 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
SPIN3-229ENST00000639809 LAMC3Q9Y6N6 1575 aa30.51■■■□□ 2.47
SPIN3-229ENST00000639809 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
SPIN3-229ENST00000639809 PDS5BQ9NTI5 1447 aa30.36■■■□□ 2.45
SPIN3-229ENST00000639809 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
SPIN3-229ENST00000639809 KIF21AQ7Z4S6 1674 aa30.2■■■□□ 2.43
SPIN3-229ENST00000639809 WIZO95785 1651 aa30.14■■■□□ 2.41
SPIN3-229ENST00000639809 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
SPIN3-229ENST00000639809 WDR62O43379 1518 aa29.98■■■□□ 2.39
SPIN3-229ENST00000639809 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
SPIN3-229ENST00000639809 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
SPIN3-229ENST00000639809 CFTRP13569 1480 aa29.87■■■□□ 2.37
SPIN3-229ENST00000639809 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
SPIN3-229ENST00000639809 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
SPIN3-229ENST00000639809 URB2Q14146 1524 aaKnown RBP29.58■■■□□ 2.33
SPIN3-229ENST00000639809 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
SPIN3-229ENST00000639809 OSCARQ8IYS5 282 aa29.47■■■□□ 2.31
SPIN3-229ENST00000639809 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
SPIN3-229ENST00000639809 TRIM41Q8WV44 630 aa29.45■■■□□ 2.31
SPIN3-229ENST00000639809 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
SPIN3-229ENST00000639809 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
SPIN3-229ENST00000639809 TOPBP1Q92547 1522 aa29.27■■■□□ 2.28
SPIN3-229ENST00000639809 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.27
SPIN3-229ENST00000639809 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
SPIN3-229ENST00000639809 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
SPIN3-229ENST00000639809 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.23
SPIN3-229ENST00000639809 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.23
SPIN3-229ENST00000639809 TARBP1Q13395 1621 aaKnown RBP29.01■■■□□ 2.23
SPIN3-229ENST00000639809 RIMBP3Q9UFD9 1639 aa29.01■■■□□ 2.23
SPIN3-229ENST00000639809 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
SPIN3-229ENST00000639809 ARHGEF11O15085 1522 aa28.94■■■□□ 2.22
SPIN3-229ENST00000639809 AQRO60306 1485 aaKnown RBP eCLIP28.94■■■□□ 2.22
SPIN3-229ENST00000639809 SOGA1O94964 1423 aa28.86■■■□□ 2.21
SPIN3-229ENST00000639809 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
SPIN3-229ENST00000639809 CHD1O14646 1710 aa28.83■■■□□ 2.21
SPIN3-229ENST00000639809 RAD54L2Q9Y4B4 1467 aa28.8■■■□□ 2.2
SPIN3-229ENST00000639809 FBLN2P98095 1184 aa28.77■■■□□ 2.2
SPIN3-229ENST00000639809 FGD5Q6ZNL6 1462 aa28.76■■■□□ 2.19
SPIN3-229ENST00000639809 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
SPIN3-229ENST00000639809 CUX1P39880 1505 aa28.71■■■□□ 2.19
SPIN3-229ENST00000639809 CYB5RLQ6IPT4 315 aa28.71■■■□□ 2.19
SPIN3-229ENST00000639809 SNAPC4Q5SXM2 1469 aa28.67■■■□□ 2.18
SPIN3-229ENST00000639809 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
SPIN3-229ENST00000639809 GRIN2BQ13224 1484 aa28.64■■■□□ 2.17
SPIN3-229ENST00000639809 ARAP1Q96P48 1450 aa28.64■■■□□ 2.17
SPIN3-229ENST00000639809 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
SPIN3-229ENST00000639809 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
SPIN3-229ENST00000639809 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
SPIN3-229ENST00000639809 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
SPIN3-229ENST00000639809 GAPVD1Q14C86 1478 aa28.51■■■□□ 2.15
SPIN3-229ENST00000639809 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
SPIN3-229ENST00000639809 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
SPIN3-229ENST00000639809 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
SPIN3-229ENST00000639809 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
SPIN3-229ENST00000639809 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
SPIN3-229ENST00000639809 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
SPIN3-229ENST00000639809 TOP2BQ02880 1626 aa28.27■■■□□ 2.12
SPIN3-229ENST00000639809 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
SPIN3-229ENST00000639809 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
SPIN3-229ENST00000639809 ADAMTS12P58397 1594 aa28.2■■■□□ 2.1
SPIN3-229ENST00000639809 NUP160Q12769 1436 aa28.18■■■□□ 2.1
SPIN3-229ENST00000639809 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
SPIN3-229ENST00000639809 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
SPIN3-229ENST00000639809 CEP170Q5SW79 1584 aa28.1■■■□□ 2.09
SPIN3-229ENST00000639809 SHROOM2Q13796 1616 aa28.03■■■□□ 2.08
SPIN3-229ENST00000639809 ERCC6L2Q5T890 1561 aa28.01■■■□□ 2.07
SPIN3-229ENST00000639809 JPH4Q96JJ6 628 aa27.88■■■□□ 2.05
SPIN3-229ENST00000639809 PRG4Q92954 1404 aaPredicted RBP27.87■■■□□ 2.05
SPIN3-229ENST00000639809 RUSC2Q8N2Y8 1516 aa27.79■■■□□ 2.04
SPIN3-229ENST00000639809 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms