RNA–Protein interactions for RNA: ENST00000639800.1

LINC01835-203, Transcript of long intergenic non-protein coding RNA 1835, humanhuman

BASIC

Gene LINC01835, Length 567 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01835-203ENST00000639800 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
LINC01835-203ENST00000639800 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
LINC01835-203ENST00000639800 ABCC9O60706 1549 aa19.9■□□□□ 0.78
LINC01835-203ENST00000639800 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
LINC01835-203ENST00000639800 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
LINC01835-203ENST00000639800 NACADO15069 1562 aa18.94■□□□□ 0.62
LINC01835-203ENST00000639800 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
LINC01835-203ENST00000639800 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
LINC01835-203ENST00000639800 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
LINC01835-203ENST00000639800 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
LINC01835-203ENST00000639800 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC01835-203ENST00000639800 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
LINC01835-203ENST00000639800 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
LINC01835-203ENST00000639800 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
LINC01835-203ENST00000639800 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
LINC01835-203ENST00000639800 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
LINC01835-203ENST00000639800 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
LINC01835-203ENST00000639800 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
LINC01835-203ENST00000639800 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
LINC01835-203ENST00000639800 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
LINC01835-203ENST00000639800 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
LINC01835-203ENST00000639800 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
LINC01835-203ENST00000639800 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
LINC01835-203ENST00000639800 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
LINC01835-203ENST00000639800 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
LINC01835-203ENST00000639800 WIZO95785 1651 aa17.41■□□□□ 0.38
LINC01835-203ENST00000639800 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
LINC01835-203ENST00000639800 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
LINC01835-203ENST00000639800 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
LINC01835-203ENST00000639800 NESP48681 1621 aa17.25■□□□□ 0.35
LINC01835-203ENST00000639800 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
LINC01835-203ENST00000639800 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
LINC01835-203ENST00000639800 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
LINC01835-203ENST00000639800 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
LINC01835-203ENST00000639800 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
LINC01835-203ENST00000639800 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
LINC01835-203ENST00000639800 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
LINC01835-203ENST00000639800 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
LINC01835-203ENST00000639800 CFTRP13569 1480 aa16.9■□□□□ 0.3
LINC01835-203ENST00000639800 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
LINC01835-203ENST00000639800 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
LINC01835-203ENST00000639800 CUX2O14529 1486 aa16.84■□□□□ 0.29
LINC01835-203ENST00000639800 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
LINC01835-203ENST00000639800 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
LINC01835-203ENST00000639800 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
LINC01835-203ENST00000639800 WDR62O43379 1518 aa16.74■□□□□ 0.27
LINC01835-203ENST00000639800 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
LINC01835-203ENST00000639800 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
LINC01835-203ENST00000639800 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
LINC01835-203ENST00000639800 CUX1P39880 1505 aa16.49■□□□□ 0.23
LINC01835-203ENST00000639800 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
LINC01835-203ENST00000639800 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
LINC01835-203ENST00000639800 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
LINC01835-203ENST00000639800 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
LINC01835-203ENST00000639800 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
LINC01835-203ENST00000639800 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
LINC01835-203ENST00000639800 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
LINC01835-203ENST00000639800 DNAJC5Q9H3Z4 198 aa16.41■□□□□ 0.22
LINC01835-203ENST00000639800 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
LINC01835-203ENST00000639800 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01835-203ENST00000639800 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
LINC01835-203ENST00000639800 SOGA1O94964 1423 aa16.35■□□□□ 0.21
LINC01835-203ENST00000639800 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
LINC01835-203ENST00000639800 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
LINC01835-203ENST00000639800 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
LINC01835-203ENST00000639800 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
LINC01835-203ENST00000639800 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
LINC01835-203ENST00000639800 CHD1O14646 1710 aa16.2■□□□□ 0.18
LINC01835-203ENST00000639800 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
LINC01835-203ENST00000639800 SNAPC4Q5SXM2 1469 aa16.18■□□□□ 0.18
LINC01835-203ENST00000639800 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
LINC01835-203ENST00000639800 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
LINC01835-203ENST00000639800 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
LINC01835-203ENST00000639800 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
LINC01835-203ENST00000639800 FBLN2P98095 1184 aa16.14■□□□□ 0.17
LINC01835-203ENST00000639800 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
LINC01835-203ENST00000639800 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
LINC01835-203ENST00000639800 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
LINC01835-203ENST00000639800 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
LINC01835-203ENST00000639800 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
LINC01835-203ENST00000639800 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
LINC01835-203ENST00000639800 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
LINC01835-203ENST00000639800 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
LINC01835-203ENST00000639800 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
LINC01835-203ENST00000639800 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
LINC01835-203ENST00000639800 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
LINC01835-203ENST00000639800 GRIN2AQ12879 1464 aa15.96■□□□□ 0.14
LINC01835-203ENST00000639800 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
LINC01835-203ENST00000639800 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
LINC01835-203ENST00000639800 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
LINC01835-203ENST00000639800 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
LINC01835-203ENST00000639800 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
LINC01835-203ENST00000639800 IGF1RP08069 1367 aa15.92■□□□□ 0.14
LINC01835-203ENST00000639800 NUP160Q12769 1436 aa15.88■□□□□ 0.13
LINC01835-203ENST00000639800 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
LINC01835-203ENST00000639800 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
LINC01835-203ENST00000639800 CUL7Q14999 1698 aa15.83■□□□□ 0.13
LINC01835-203ENST00000639800 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
LINC01835-203ENST00000639800 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
LINC01835-203ENST00000639800 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms