RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
SPIN3-228ENST00000639794 CCDC180Q9P1Z9 1646 aa36.19■■■■□ 3.38
SPIN3-228ENST00000639794 ABCC9O60706 1549 aa35.63■■■■□ 3.29
SPIN3-228ENST00000639794 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
SPIN3-228ENST00000639794 RB1CC1Q8TDY2 1594 aa34.12■■■■□ 3.05
SPIN3-228ENST00000639794 NACADO15069 1562 aa34.03■■■■□ 3.04
SPIN3-228ENST00000639794 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
SPIN3-228ENST00000639794 MYO15BQ96JP2 1530 aa33.69■■■□□ 2.98
SPIN3-228ENST00000639794 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
SPIN3-228ENST00000639794 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
SPIN3-228ENST00000639794 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
SPIN3-228ENST00000639794 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
SPIN3-228ENST00000639794 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
SPIN3-228ENST00000639794 DNAJC5BQ9UF47 199 aa32.69■■■□□ 2.82
SPIN3-228ENST00000639794 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
SPIN3-228ENST00000639794 EIF4G1Q04637 1599 aaKnown RBP32.25■■■□□ 2.75
SPIN3-228ENST00000639794 CC2D2AQ9P2K1 1620 aa32.16■■■□□ 2.74
SPIN3-228ENST00000639794 CECR2Q9BXF3 1484 aa31.94■■■□□ 2.7
SPIN3-228ENST00000639794 SMARCA4P51532 1647 aa31.67■■■□□ 2.66
SPIN3-228ENST00000639794 BAZ1AQ9NRL2 1556 aaPredicted RBP31.59■■■□□ 2.65
SPIN3-228ENST00000639794 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
SPIN3-228ENST00000639794 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
SPIN3-228ENST00000639794 SMARCA2P51531 1590 aa31.41■■■□□ 2.62
SPIN3-228ENST00000639794 NCAPD3P42695 1498 aa31.39■■■□□ 2.61
SPIN3-228ENST00000639794 BAZ1BQ9UIG0 1483 aaKnown RBP31.25■■■□□ 2.59
SPIN3-228ENST00000639794 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
SPIN3-228ENST00000639794 PEG3Q9GZU2 1588 aa31.24■■■□□ 2.59
SPIN3-228ENST00000639794 WIZO95785 1651 aa31.21■■■□□ 2.59
SPIN3-228ENST00000639794 RSF1Q96T23 1441 aaPredicted RBP31.08■■■□□ 2.57
SPIN3-228ENST00000639794 NESP48681 1621 aa30.83■■■□□ 2.53
SPIN3-228ENST00000639794 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.52
SPIN3-228ENST00000639794 ERCC6Q03468 1493 aa30.69■■■□□ 2.5
SPIN3-228ENST00000639794 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
SPIN3-228ENST00000639794 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
SPIN3-228ENST00000639794 SUPT5HO00267 1087 aaKnown RBP30.52■■■□□ 2.48
SPIN3-228ENST00000639794 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
SPIN3-228ENST00000639794 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
SPIN3-228ENST00000639794 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
SPIN3-228ENST00000639794 CFTRP13569 1480 aa30.32■■■□□ 2.44
SPIN3-228ENST00000639794 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.43
SPIN3-228ENST00000639794 FANCD2Q9BXW9 1451 aa30.23■■■□□ 2.43
SPIN3-228ENST00000639794 CUX2O14529 1486 aa30.21■■■□□ 2.43
SPIN3-228ENST00000639794 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
SPIN3-228ENST00000639794 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
SPIN3-228ENST00000639794 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
SPIN3-228ENST00000639794 WDR62O43379 1518 aa29.99■■■□□ 2.39
SPIN3-228ENST00000639794 URB2Q14146 1524 aaKnown RBP29.94■■■□□ 2.38
SPIN3-228ENST00000639794 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
SPIN3-228ENST00000639794 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
SPIN3-228ENST00000639794 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
SPIN3-228ENST00000639794 CUX1P39880 1505 aa29.54■■■□□ 2.32
SPIN3-228ENST00000639794 IFT140Q96RY7 1462 aa29.5■■■□□ 2.31
SPIN3-228ENST00000639794 POLA1P09884 1462 aaPredicted RBP29.49■■■□□ 2.31
SPIN3-228ENST00000639794 ZNF608Q9ULD9 1512 aaPredicted RBP29.48■■■□□ 2.31
SPIN3-228ENST00000639794 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
SPIN3-228ENST00000639794 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
SPIN3-228ENST00000639794 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
SPIN3-228ENST00000639794 SOGA1O94964 1423 aa29.38■■■□□ 2.29
SPIN3-228ENST00000639794 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
SPIN3-228ENST00000639794 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
SPIN3-228ENST00000639794 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
SPIN3-228ENST00000639794 AQRO60306 1485 aaKnown RBP eCLIP29.33■■■□□ 2.29
SPIN3-228ENST00000639794 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
SPIN3-228ENST00000639794 TDRD9Q8NDG6 1382 aaKnown RBP29.28■■■□□ 2.28
SPIN3-228ENST00000639794 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
SPIN3-228ENST00000639794 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
SPIN3-228ENST00000639794 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
SPIN3-228ENST00000639794 FBLN2P98095 1184 aa29.08■■■□□ 2.25
SPIN3-228ENST00000639794 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
SPIN3-228ENST00000639794 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
SPIN3-228ENST00000639794 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
SPIN3-228ENST00000639794 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
SPIN3-228ENST00000639794 CHD1O14646 1710 aa29.03■■■□□ 2.24
SPIN3-228ENST00000639794 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
SPIN3-228ENST00000639794 GRIN2BQ13224 1484 aa29■■■□□ 2.23
SPIN3-228ENST00000639794 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
SPIN3-228ENST00000639794 CHMP7Q8WUX9 453 aaPredicted RBP28.89■■■□□ 2.22
SPIN3-228ENST00000639794 MAGI1Q96QZ7 1491 aaPredicted RBP28.89■■■□□ 2.22
SPIN3-228ENST00000639794 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
SPIN3-228ENST00000639794 ADAMTS12P58397 1594 aa28.73■■■□□ 2.19
SPIN3-228ENST00000639794 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
SPIN3-228ENST00000639794 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
SPIN3-228ENST00000639794 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
SPIN3-228ENST00000639794 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
SPIN3-228ENST00000639794 GRIN2AQ12879 1464 aa28.64■■■□□ 2.18
SPIN3-228ENST00000639794 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
SPIN3-228ENST00000639794 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
SPIN3-228ENST00000639794 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
SPIN3-228ENST00000639794 ARHGEF11O15085 1522 aa28.59■■■□□ 2.17
SPIN3-228ENST00000639794 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
SPIN3-228ENST00000639794 IGF1RP08069 1367 aa28.58■■■□□ 2.17
SPIN3-228ENST00000639794 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
SPIN3-228ENST00000639794 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
SPIN3-228ENST00000639794 CUL7Q14999 1698 aa28.49■■■□□ 2.15
SPIN3-228ENST00000639794 NUP160Q12769 1436 aa28.46■■■□□ 2.15
SPIN3-228ENST00000639794 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
SPIN3-228ENST00000639794 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
SPIN3-228ENST00000639794 ARAP1Q96P48 1450 aa28.37■■■□□ 2.13
SPIN3-228ENST00000639794 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
SPIN3-228ENST00000639794 ERCC6L2Q5T890 1561 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms