RNA–Protein interactions for RNA: ENST00000639625.1

GABRD-209, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

Gene GABRD, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-209ENST00000639625 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
GABRD-209ENST00000639625 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.55
GABRD-209ENST00000639625 ABCC9O60706 1549 aa30.31■■■□□ 2.44
GABRD-209ENST00000639625 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
GABRD-209ENST00000639625 NACADO15069 1562 aa29.12■■■□□ 2.25
GABRD-209ENST00000639625 DCAF8L2P0C7V8 631 aa28.95■■■□□ 2.22
GABRD-209ENST00000639625 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
GABRD-209ENST00000639625 ZCCHC6Q5VYS8 1495 aaKnown RBP28.87■■■□□ 2.21
GABRD-209ENST00000639625 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
GABRD-209ENST00000639625 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
GABRD-209ENST00000639625 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
GABRD-209ENST00000639625 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
GABRD-209ENST00000639625 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
GABRD-209ENST00000639625 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
GABRD-209ENST00000639625 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
GABRD-209ENST00000639625 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
GABRD-209ENST00000639625 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
GABRD-209ENST00000639625 CECR2Q9BXF3 1484 aa27.27■■□□□ 1.96
GABRD-209ENST00000639625 SMARCA4P51532 1647 aa26.95■■□□□ 1.91
GABRD-209ENST00000639625 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
GABRD-209ENST00000639625 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
GABRD-209ENST00000639625 SMARCA2P51531 1590 aa26.83■■□□□ 1.89
GABRD-209ENST00000639625 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
GABRD-209ENST00000639625 PEG3Q9GZU2 1588 aa26.72■■□□□ 1.87
GABRD-209ENST00000639625 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
GABRD-209ENST00000639625 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
GABRD-209ENST00000639625 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
GABRD-209ENST00000639625 WIZO95785 1651 aa26.41■■□□□ 1.82
GABRD-209ENST00000639625 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
GABRD-209ENST00000639625 LAMC3Q9Y6N6 1575 aa26.19■■□□□ 1.78
GABRD-209ENST00000639625 NESP48681 1621 aa26.17■■□□□ 1.78
GABRD-209ENST00000639625 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
GABRD-209ENST00000639625 TOP2AP11388 1531 aaKnown RBP26.16■■□□□ 1.78
GABRD-209ENST00000639625 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
GABRD-209ENST00000639625 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
GABRD-209ENST00000639625 CUX2O14529 1486 aa25.98■■□□□ 1.75
GABRD-209ENST00000639625 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
GABRD-209ENST00000639625 CFTRP13569 1480 aa25.87■■□□□ 1.73
GABRD-209ENST00000639625 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
GABRD-209ENST00000639625 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
GABRD-209ENST00000639625 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
GABRD-209ENST00000639625 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
GABRD-209ENST00000639625 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
GABRD-209ENST00000639625 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
GABRD-209ENST00000639625 WDR62O43379 1518 aa25.65■■□□□ 1.7
GABRD-209ENST00000639625 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
GABRD-209ENST00000639625 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
GABRD-209ENST00000639625 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
GABRD-209ENST00000639625 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
GABRD-209ENST00000639625 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
GABRD-209ENST00000639625 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
GABRD-209ENST00000639625 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
GABRD-209ENST00000639625 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
GABRD-209ENST00000639625 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
GABRD-209ENST00000639625 CUX1P39880 1505 aa25.06■■□□□ 1.6
GABRD-209ENST00000639625 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
GABRD-209ENST00000639625 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
GABRD-209ENST00000639625 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
GABRD-209ENST00000639625 SOGA1O94964 1423 aa24.98■■□□□ 1.59
GABRD-209ENST00000639625 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
GABRD-209ENST00000639625 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
GABRD-209ENST00000639625 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.57
GABRD-209ENST00000639625 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
GABRD-209ENST00000639625 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
GABRD-209ENST00000639625 TOP2BQ02880 1626 aa24.85■■□□□ 1.57
GABRD-209ENST00000639625 OSCARQ8IYS5 282 aa24.83■■□□□ 1.57
GABRD-209ENST00000639625 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
GABRD-209ENST00000639625 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
GABRD-209ENST00000639625 ABCA10Q8WWZ4 1543 aa24.77■■□□□ 1.56
GABRD-209ENST00000639625 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
GABRD-209ENST00000639625 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
GABRD-209ENST00000639625 CHD1O14646 1710 aa24.69■■□□□ 1.54
GABRD-209ENST00000639625 ABCA5Q8WWZ7 1642 aa24.69■■□□□ 1.54
GABRD-209ENST00000639625 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
GABRD-209ENST00000639625 SNAPC4Q5SXM2 1469 aa24.68■■□□□ 1.54
GABRD-209ENST00000639625 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
GABRD-209ENST00000639625 FBLN2P98095 1184 aa24.62■■□□□ 1.53
GABRD-209ENST00000639625 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
GABRD-209ENST00000639625 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
GABRD-209ENST00000639625 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
GABRD-209ENST00000639625 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
GABRD-209ENST00000639625 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
GABRD-209ENST00000639625 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
GABRD-209ENST00000639625 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
GABRD-209ENST00000639625 ARHGEF11O15085 1522 aa24.44■■□□□ 1.5
GABRD-209ENST00000639625 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
GABRD-209ENST00000639625 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
GABRD-209ENST00000639625 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
GABRD-209ENST00000639625 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
GABRD-209ENST00000639625 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
GABRD-209ENST00000639625 NUP160Q12769 1436 aa24.29■■□□□ 1.48
GABRD-209ENST00000639625 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
GABRD-209ENST00000639625 CUL7Q14999 1698 aa24.27■■□□□ 1.48
GABRD-209ENST00000639625 IGF1RP08069 1367 aa24.25■■□□□ 1.47
GABRD-209ENST00000639625 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
GABRD-209ENST00000639625 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
GABRD-209ENST00000639625 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
GABRD-209ENST00000639625 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
GABRD-209ENST00000639625 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
GABRD-209ENST00000639625 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms