RNA–Protein interactions for RNA: ENST00000639390.1

PRF1-204, Transcript of perforin 1, humanhuman

TSL 5

Gene PRF1, Length 523 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRF1-204ENST00000639390 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
PRF1-204ENST00000639390 CCDC180Q9P1Z9 1646 aa24.38■■□□□ 1.49
PRF1-204ENST00000639390 ABCC9O60706 1549 aa23.9■■□□□ 1.42
PRF1-204ENST00000639390 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
PRF1-204ENST00000639390 NACADO15069 1562 aa22.94■■□□□ 1.26
PRF1-204ENST00000639390 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
PRF1-204ENST00000639390 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
PRF1-204ENST00000639390 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
PRF1-204ENST00000639390 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
PRF1-204ENST00000639390 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
PRF1-204ENST00000639390 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
PRF1-204ENST00000639390 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
PRF1-204ENST00000639390 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
PRF1-204ENST00000639390 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
PRF1-204ENST00000639390 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
PRF1-204ENST00000639390 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
PRF1-204ENST00000639390 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
PRF1-204ENST00000639390 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
PRF1-204ENST00000639390 SMARCA4P51532 1647 aa21.27■■□□□ 1
PRF1-204ENST00000639390 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
PRF1-204ENST00000639390 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
PRF1-204ENST00000639390 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
PRF1-204ENST00000639390 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
PRF1-204ENST00000639390 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
PRF1-204ENST00000639390 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
PRF1-204ENST00000639390 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
PRF1-204ENST00000639390 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
PRF1-204ENST00000639390 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
PRF1-204ENST00000639390 WIZO95785 1651 aa20.85■□□□□ 0.93
PRF1-204ENST00000639390 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
PRF1-204ENST00000639390 NESP48681 1621 aa20.66■□□□□ 0.9
PRF1-204ENST00000639390 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
PRF1-204ENST00000639390 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
PRF1-204ENST00000639390 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
PRF1-204ENST00000639390 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
PRF1-204ENST00000639390 CUX2O14529 1486 aa20.43■□□□□ 0.86
PRF1-204ENST00000639390 CFTRP13569 1480 aa20.43■□□□□ 0.86
PRF1-204ENST00000639390 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
PRF1-204ENST00000639390 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
PRF1-204ENST00000639390 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
PRF1-204ENST00000639390 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
PRF1-204ENST00000639390 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
PRF1-204ENST00000639390 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
PRF1-204ENST00000639390 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
PRF1-204ENST00000639390 WDR62O43379 1518 aa20.22■□□□□ 0.83
PRF1-204ENST00000639390 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
PRF1-204ENST00000639390 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
PRF1-204ENST00000639390 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
PRF1-204ENST00000639390 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
PRF1-204ENST00000639390 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
PRF1-204ENST00000639390 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
PRF1-204ENST00000639390 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
PRF1-204ENST00000639390 CUX1P39880 1505 aa19.81■□□□□ 0.76
PRF1-204ENST00000639390 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
PRF1-204ENST00000639390 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
PRF1-204ENST00000639390 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
PRF1-204ENST00000639390 TARBP1Q13395 1621 aaKnown RBP19.75■□□□□ 0.75
PRF1-204ENST00000639390 SOGA1O94964 1423 aa19.73■□□□□ 0.75
PRF1-204ENST00000639390 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
PRF1-204ENST00000639390 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
PRF1-204ENST00000639390 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
PRF1-204ENST00000639390 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.74
PRF1-204ENST00000639390 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
PRF1-204ENST00000639390 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
PRF1-204ENST00000639390 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
PRF1-204ENST00000639390 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
PRF1-204ENST00000639390 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
PRF1-204ENST00000639390 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
PRF1-204ENST00000639390 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
PRF1-204ENST00000639390 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
PRF1-204ENST00000639390 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
PRF1-204ENST00000639390 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
PRF1-204ENST00000639390 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
PRF1-204ENST00000639390 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
PRF1-204ENST00000639390 FBLN2P98095 1184 aa19.44■□□□□ 0.7
PRF1-204ENST00000639390 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
PRF1-204ENST00000639390 CHD1O14646 1710 aa19.42■□□□□ 0.7
PRF1-204ENST00000639390 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
PRF1-204ENST00000639390 CHMP7Q8WUX9 453 aaPredicted RBP19.38■□□□□ 0.69
PRF1-204ENST00000639390 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
PRF1-204ENST00000639390 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
PRF1-204ENST00000639390 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
PRF1-204ENST00000639390 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
PRF1-204ENST00000639390 GRIN2AQ12879 1464 aa19.27■□□□□ 0.67
PRF1-204ENST00000639390 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
PRF1-204ENST00000639390 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
PRF1-204ENST00000639390 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
PRF1-204ENST00000639390 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
PRF1-204ENST00000639390 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
PRF1-204ENST00000639390 NUP160Q12769 1436 aa19.18■□□□□ 0.66
PRF1-204ENST00000639390 IGF1RP08069 1367 aa19.18■□□□□ 0.66
PRF1-204ENST00000639390 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
PRF1-204ENST00000639390 CEP170Q5SW79 1584 aa19.16■□□□□ 0.66
PRF1-204ENST00000639390 CUL7Q14999 1698 aa19.14■□□□□ 0.66
PRF1-204ENST00000639390 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
PRF1-204ENST00000639390 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
PRF1-204ENST00000639390 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
PRF1-204ENST00000639390 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
PRF1-204ENST00000639390 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
PRF1-204ENST00000639390 KIAA0586Q9BVV6 1533 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms