RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 NISCHQ9Y2I1 1504 aa43.97■■■■■ 4.63
SPIN3-220ENST00000639257 CCDC180Q9P1Z9 1646 aa39.17■■■■□ 3.86
SPIN3-220ENST00000639257 ABCC9O60706 1549 aa38.28■■■■□ 3.72
SPIN3-220ENST00000639257 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
SPIN3-220ENST00000639257 NACADO15069 1562 aa36.83■■■■□ 3.49
SPIN3-220ENST00000639257 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
SPIN3-220ENST00000639257 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
SPIN3-220ENST00000639257 DCAF1Q9Y4B6 1507 aa36.47■■■■□ 3.43
SPIN3-220ENST00000639257 DCAF8L2P0C7V8 631 aa36.46■■■■□ 3.43
SPIN3-220ENST00000639257 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
SPIN3-220ENST00000639257 BICRAQ9NZM4 1560 aa35.82■■■■□ 3.32
SPIN3-220ENST00000639257 PABPN1Q86U42 306 aaKnown RBP eCLIP35.7■■■■□ 3.31
SPIN3-220ENST00000639257 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
SPIN3-220ENST00000639257 SHROOM4Q9ULL8 1493 aa35.49■■■■□ 3.27
SPIN3-220ENST00000639257 DNAJC5BQ9UF47 199 aa35.3■■■■□ 3.24
SPIN3-220ENST00000639257 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
SPIN3-220ENST00000639257 CC2D2AQ9P2K1 1620 aa34.69■■■■□ 3.14
SPIN3-220ENST00000639257 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.1
SPIN3-220ENST00000639257 SMARCA4P51532 1647 aa34.12■■■■□ 3.05
SPIN3-220ENST00000639257 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
SPIN3-220ENST00000639257 NCAPD3P42695 1498 aa34.01■■■■□ 3.04
SPIN3-220ENST00000639257 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
SPIN3-220ENST00000639257 SMARCA2P51531 1590 aa33.92■■■■□ 3.02
SPIN3-220ENST00000639257 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
SPIN3-220ENST00000639257 MROH2BQ7Z745 1585 aa33.86■■■■□ 3.01
SPIN3-220ENST00000639257 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
SPIN3-220ENST00000639257 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SPIN3-220ENST00000639257 WIZO95785 1651 aa33.45■■■□□ 2.95
SPIN3-220ENST00000639257 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.94
SPIN3-220ENST00000639257 TOP2AP11388 1531 aaKnown RBP33.14■■■□□ 2.9
SPIN3-220ENST00000639257 NESP48681 1621 aa33.13■■■□□ 2.89
SPIN3-220ENST00000639257 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
SPIN3-220ENST00000639257 ERCC6Q03468 1493 aa32.96■■■□□ 2.87
SPIN3-220ENST00000639257 CADPSQ9ULU8 1353 aa32.96■■■□□ 2.87
SPIN3-220ENST00000639257 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.84
SPIN3-220ENST00000639257 CUX2O14529 1486 aa32.8■■■□□ 2.84
SPIN3-220ENST00000639257 CFTRP13569 1480 aa32.79■■■□□ 2.84
SPIN3-220ENST00000639257 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
SPIN3-220ENST00000639257 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
SPIN3-220ENST00000639257 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
SPIN3-220ENST00000639257 FANCD2Q9BXW9 1451 aa32.55■■■□□ 2.8
SPIN3-220ENST00000639257 MRC2Q9UBG0 1479 aa32.51■■■□□ 2.79
SPIN3-220ENST00000639257 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
SPIN3-220ENST00000639257 PRDM2Q13029 1718 aa32.5■■■□□ 2.79
SPIN3-220ENST00000639257 WDR62O43379 1518 aa32.47■■■□□ 2.79
SPIN3-220ENST00000639257 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
SPIN3-220ENST00000639257 URB2Q14146 1524 aaKnown RBP32.27■■■□□ 2.76
SPIN3-220ENST00000639257 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
SPIN3-220ENST00000639257 ABCC8Q09428 1581 aa32.04■■■□□ 2.72
SPIN3-220ENST00000639257 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
SPIN3-220ENST00000639257 DNAJC5Q9H3Z4 198 aa31.87■■■□□ 2.69
SPIN3-220ENST00000639257 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
SPIN3-220ENST00000639257 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
SPIN3-220ENST00000639257 CUX1P39880 1505 aa31.77■■■□□ 2.68
SPIN3-220ENST00000639257 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
SPIN3-220ENST00000639257 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
SPIN3-220ENST00000639257 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
SPIN3-220ENST00000639257 EIF4G3O43432 1585 aaKnown RBP31.6■■■□□ 2.65
SPIN3-220ENST00000639257 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
SPIN3-220ENST00000639257 SOGA1O94964 1423 aa31.58■■■□□ 2.65
SPIN3-220ENST00000639257 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
SPIN3-220ENST00000639257 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
SPIN3-220ENST00000639257 AQRO60306 1485 aaKnown RBP eCLIP31.49■■■□□ 2.63
SPIN3-220ENST00000639257 WRNQ14191 1432 aaPredicted RBP eCLIP31.49■■■□□ 2.63
SPIN3-220ENST00000639257 TOP2BQ02880 1626 aa31.48■■■□□ 2.63
SPIN3-220ENST00000639257 SYNJ1O43426 1573 aa31.44■■■□□ 2.62
SPIN3-220ENST00000639257 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
SPIN3-220ENST00000639257 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
SPIN3-220ENST00000639257 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
SPIN3-220ENST00000639257 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
SPIN3-220ENST00000639257 GRIN2BQ13224 1484 aa31.27■■■□□ 2.6
SPIN3-220ENST00000639257 GAPVD1Q14C86 1478 aa31.23■■■□□ 2.59
SPIN3-220ENST00000639257 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
SPIN3-220ENST00000639257 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
SPIN3-220ENST00000639257 CHD1O14646 1710 aa31.18■■■□□ 2.58
SPIN3-220ENST00000639257 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
SPIN3-220ENST00000639257 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
SPIN3-220ENST00000639257 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
SPIN3-220ENST00000639257 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
SPIN3-220ENST00000639257 FBLN2P98095 1184 aa30.97■■■□□ 2.55
SPIN3-220ENST00000639257 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
SPIN3-220ENST00000639257 CLASP1Q7Z460 1538 aa30.94■■■□□ 2.54
SPIN3-220ENST00000639257 FHAD1B1AJZ9 1412 aa30.89■■■□□ 2.53
SPIN3-220ENST00000639257 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
SPIN3-220ENST00000639257 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 GRIN2AQ12879 1464 aa30.87■■■□□ 2.53
SPIN3-220ENST00000639257 KIF27Q86VH2 1401 aa30.82■■■□□ 2.52
SPIN3-220ENST00000639257 NUP160Q12769 1436 aa30.8■■■□□ 2.52
SPIN3-220ENST00000639257 IGF1RP08069 1367 aa30.76■■■□□ 2.51
SPIN3-220ENST00000639257 CEP170Q5SW79 1584 aa30.73■■■□□ 2.51
SPIN3-220ENST00000639257 CUL7Q14999 1698 aa30.68■■■□□ 2.5
SPIN3-220ENST00000639257 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
SPIN3-220ENST00000639257 SHROOM2Q13796 1616 aa30.59■■■□□ 2.49
SPIN3-220ENST00000639257 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
SPIN3-220ENST00000639257 RUSC2Q8N2Y8 1516 aa30.52■■■□□ 2.48
SPIN3-220ENST00000639257 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
SPIN3-220ENST00000639257 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
SPIN3-220ENST00000639257 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms