RNA–Protein interactions for RNA: ENST00000639203.1

PAX6-254, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-254ENST00000639203 NISCHQ9Y2I1 1504 aa45.81■■■■■ 4.92
PAX6-254ENST00000639203 ABCC9O60706 1549 aa41.5■■■■■ 4.23
PAX6-254ENST00000639203 CCDC180Q9P1Z9 1646 aa41.27■■■■■ 4.2
PAX6-254ENST00000639203 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.9
PAX6-254ENST00000639203 DNAJC5BQ9UF47 199 aa39.31■■■■□ 3.88
PAX6-254ENST00000639203 NACADO15069 1562 aa38.99■■■■□ 3.83
PAX6-254ENST00000639203 DCAF8L2P0C7V8 631 aa38.58■■■■□ 3.77
PAX6-254ENST00000639203 PABPN1Q86U42 306 aaKnown RBP eCLIP38.52■■■■□ 3.76
PAX6-254ENST00000639203 UNC13AQ9UPW8 1703 aa38.44■■■■□ 3.74
PAX6-254ENST00000639203 MYO15BQ96JP2 1530 aa38.42■■■■□ 3.74
PAX6-254ENST00000639203 BICRAQ9NZM4 1560 aa38.18■■■■□ 3.7
PAX6-254ENST00000639203 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
PAX6-254ENST00000639203 DCAF1Q9Y4B6 1507 aa37.95■■■■□ 3.67
PAX6-254ENST00000639203 SHROOM4Q9ULL8 1493 aa37.75■■■■□ 3.63
PAX6-254ENST00000639203 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
PAX6-254ENST00000639203 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
PAX6-254ENST00000639203 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
PAX6-254ENST00000639203 EIF4G1Q04637 1599 aaKnown RBP37.31■■■■□ 3.56
PAX6-254ENST00000639203 DNAJC5Q9H3Z4 198 aa36.58■■■■□ 3.45
PAX6-254ENST00000639203 CUX2O14529 1486 aa36.07■■■■□ 3.37
PAX6-254ENST00000639203 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
PAX6-254ENST00000639203 ERCC6Q03468 1493 aa35.93■■■■□ 3.34
PAX6-254ENST00000639203 SMARCA4P51532 1647 aa35.77■■■■□ 3.32
PAX6-254ENST00000639203 ATAD2BQ9ULI0 1458 aa35.76■■■■□ 3.32
PAX6-254ENST00000639203 SMARCA2P51531 1590 aa35.72■■■■□ 3.31
PAX6-254ENST00000639203 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
PAX6-254ENST00000639203 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
PAX6-254ENST00000639203 NESP48681 1621 aa35.49■■■■□ 3.27
PAX6-254ENST00000639203 PEG3Q9GZU2 1588 aa35.45■■■■□ 3.27
PAX6-254ENST00000639203 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
PAX6-254ENST00000639203 THOC2Q8NI27 1593 aaKnown RBP35.29■■■■□ 3.24
PAX6-254ENST00000639203 LAMC3Q9Y6N6 1575 aa35.28■■■■□ 3.24
PAX6-254ENST00000639203 MROH2BQ7Z745 1585 aa35.23■■■■□ 3.23
PAX6-254ENST00000639203 PDS5BQ9NTI5 1447 aa35.09■■■■□ 3.21
PAX6-254ENST00000639203 KIF21AQ7Z4S6 1674 aa35.07■■■■□ 3.2
PAX6-254ENST00000639203 WIZO95785 1651 aa34.88■■■■□ 3.17
PAX6-254ENST00000639203 CADPSQ9ULU8 1353 aa34.85■■■■□ 3.17
PAX6-254ENST00000639203 MRC2Q9UBG0 1479 aa34.78■■■■□ 3.16
PAX6-254ENST00000639203 WDR62O43379 1518 aa34.72■■■■□ 3.15
PAX6-254ENST00000639203 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
PAX6-254ENST00000639203 CEP164Q9UPV0 1460 aa34.55■■■■□ 3.12
PAX6-254ENST00000639203 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
PAX6-254ENST00000639203 TOP2AP11388 1531 aaKnown RBP34.5■■■■□ 3.11
PAX6-254ENST00000639203 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
PAX6-254ENST00000639203 CFTRP13569 1480 aa34.34■■■■□ 3.09
PAX6-254ENST00000639203 OSCARQ8IYS5 282 aa34.33■■■■□ 3.09
PAX6-254ENST00000639203 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
PAX6-254ENST00000639203 URB2Q14146 1524 aaKnown RBP34.16■■■■□ 3.06
PAX6-254ENST00000639203 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
PAX6-254ENST00000639203 RIMBP3CA6NJZ7 1639 aa33.9■■■■□ 3.02
PAX6-254ENST00000639203 RIMBP3BA6NNM3 1639 aa33.9■■■■□ 3.02
PAX6-254ENST00000639203 RIMBP3Q9UFD9 1639 aa33.9■■■■□ 3.02
PAX6-254ENST00000639203 IFT140Q96RY7 1462 aa33.88■■■■□ 3.01
PAX6-254ENST00000639203 ZNF608Q9ULD9 1512 aaPredicted RBP33.8■■■■□ 3
PAX6-254ENST00000639203 ARHGEF11O15085 1522 aa33.74■■■□□ 2.99
PAX6-254ENST00000639203 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
PAX6-254ENST00000639203 TOPBP1Q92547 1522 aa33.73■■■□□ 2.99
PAX6-254ENST00000639203 DNMBPQ6XZF7 1577 aa33.65■■■□□ 2.98
PAX6-254ENST00000639203 EIF4G3O43432 1585 aaKnown RBP33.64■■■□□ 2.98
PAX6-254ENST00000639203 CYB5RLQ6IPT4 315 aa33.5■■■□□ 2.95
PAX6-254ENST00000639203 CHD1O14646 1710 aa33.5■■■□□ 2.95
PAX6-254ENST00000639203 TARBP1Q13395 1621 aaKnown RBP33.47■■■□□ 2.95
PAX6-254ENST00000639203 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.94
PAX6-254ENST00000639203 FBLN2P98095 1184 aa33.35■■■□□ 2.93
PAX6-254ENST00000639203 ARAP1Q96P48 1450 aa33.35■■■□□ 2.93
PAX6-254ENST00000639203 POLA1P09884 1462 aaPredicted RBP33.34■■■□□ 2.93
PAX6-254ENST00000639203 TRHP20396 242 aaPredicted RBP33.32■■■□□ 2.92
PAX6-254ENST00000639203 WDR97A6NE52 1622 aa33.25■■■□□ 2.91
PAX6-254ENST00000639203 SOGA1O94964 1423 aa33.19■■■□□ 2.9
PAX6-254ENST00000639203 RAD54L2Q9Y4B4 1467 aa33.19■■■□□ 2.9
PAX6-254ENST00000639203 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
PAX6-254ENST00000639203 FGD5Q6ZNL6 1462 aa33.15■■■□□ 2.9
PAX6-254ENST00000639203 CUX1P39880 1505 aa33.12■■■□□ 2.89
PAX6-254ENST00000639203 SNAPC4Q5SXM2 1469 aa33.11■■■□□ 2.89
PAX6-254ENST00000639203 CLASP1Q7Z460 1538 aa33.09■■■□□ 2.89
PAX6-254ENST00000639203 SYNJ1O43426 1573 aa33.08■■■□□ 2.89
PAX6-254ENST00000639203 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
PAX6-254ENST00000639203 CHMP7Q8WUX9 453 aaPredicted RBP33.06■■■□□ 2.88
PAX6-254ENST00000639203 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
PAX6-254ENST00000639203 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
PAX6-254ENST00000639203 SYNJ2O15056 1496 aa32.94■■■□□ 2.86
PAX6-254ENST00000639203 PBRM1Q86U86 1689 aa32.94■■■□□ 2.86
PAX6-254ENST00000639203 ABCA10Q8WWZ4 1543 aa32.82■■■□□ 2.84
PAX6-254ENST00000639203 ABCA5Q8WWZ7 1642 aa32.81■■■□□ 2.84
PAX6-254ENST00000639203 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
PAX6-254ENST00000639203 BIVM-ERCC5R4GMW8 1640 aa32.77■■■□□ 2.84
PAX6-254ENST00000639203 AEBP2Q6ZN18 517 aaPredicted RBP32.76■■■□□ 2.83
PAX6-254ENST00000639203 TOP2BQ02880 1626 aa32.73■■■□□ 2.83
PAX6-254ENST00000639203 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.83
PAX6-254ENST00000639203 GRIN2AQ12879 1464 aa32.54■■■□□ 2.8
PAX6-254ENST00000639203 ADAMTS12P58397 1594 aa32.54■■■□□ 2.8
PAX6-254ENST00000639203 ERCC6L2Q5T890 1561 aa32.47■■■□□ 2.79
PAX6-254ENST00000639203 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
PAX6-254ENST00000639203 NUP160Q12769 1436 aa32.46■■■□□ 2.79
PAX6-254ENST00000639203 CEP170Q5SW79 1584 aa32.45■■■□□ 2.79
PAX6-254ENST00000639203 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
PAX6-254ENST00000639203 SHROOM2Q13796 1616 aa32.39■■■□□ 2.78
PAX6-254ENST00000639203 KIF13AQ9H1H9 1805 aa32.22■■■□□ 2.75
PAX6-254ENST00000639203 PRG4Q92954 1404 aaPredicted RBP32.17■■■□□ 2.74
PAX6-254ENST00000639203 JPH4Q96JJ6 628 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms