RNA–Protein interactions for RNA: ENST00000639045.1

GABRD-207, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 1,247 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-207ENST00000639045 NISCHQ9Y2I1 1504 aa36.19■■■■□ 3.38
GABRD-207ENST00000639045 ABCC9O60706 1549 aa32.82■■■□□ 2.84
GABRD-207ENST00000639045 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
GABRD-207ENST00000639045 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
GABRD-207ENST00000639045 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
GABRD-207ENST00000639045 NACADO15069 1562 aa30.8■■■□□ 2.52
GABRD-207ENST00000639045 DCAF8L2P0C7V8 631 aa30.61■■■□□ 2.49
GABRD-207ENST00000639045 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
GABRD-207ENST00000639045 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
GABRD-207ENST00000639045 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
GABRD-207ENST00000639045 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
GABRD-207ENST00000639045 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
GABRD-207ENST00000639045 DCAF1Q9Y4B6 1507 aa29.87■■■□□ 2.37
GABRD-207ENST00000639045 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
GABRD-207ENST00000639045 SCRIBQ14160 1630 aa29.62■■■□□ 2.33
GABRD-207ENST00000639045 CECR2Q9BXF3 1484 aa29.59■■■□□ 2.33
GABRD-207ENST00000639045 CC2D2AQ9P2K1 1620 aa29.58■■■□□ 2.33
GABRD-207ENST00000639045 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
GABRD-207ENST00000639045 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
GABRD-207ENST00000639045 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
GABRD-207ENST00000639045 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
GABRD-207ENST00000639045 CUX2O14529 1486 aa28.35■■■□□ 2.13
GABRD-207ENST00000639045 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
GABRD-207ENST00000639045 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
GABRD-207ENST00000639045 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
GABRD-207ENST00000639045 SMARCA2P51531 1590 aa28.21■■■□□ 2.11
GABRD-207ENST00000639045 NESP48681 1621 aa28.14■■■□□ 2.1
GABRD-207ENST00000639045 BAZ1AQ9NRL2 1556 aaPredicted RBP28.06■■■□□ 2.08
GABRD-207ENST00000639045 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
GABRD-207ENST00000639045 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
GABRD-207ENST00000639045 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
GABRD-207ENST00000639045 THOC2Q8NI27 1593 aaKnown RBP27.85■■■□□ 2.05
GABRD-207ENST00000639045 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
GABRD-207ENST00000639045 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
GABRD-207ENST00000639045 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
GABRD-207ENST00000639045 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
GABRD-207ENST00000639045 MRC2Q9UBG0 1479 aa27.5■■□□□ 1.99
GABRD-207ENST00000639045 WIZO95785 1651 aa27.48■■□□□ 1.99
GABRD-207ENST00000639045 WDR62O43379 1518 aa27.44■■□□□ 1.98
GABRD-207ENST00000639045 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
GABRD-207ENST00000639045 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
GABRD-207ENST00000639045 CFTRP13569 1480 aa27.27■■□□□ 1.96
GABRD-207ENST00000639045 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
GABRD-207ENST00000639045 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
GABRD-207ENST00000639045 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
GABRD-207ENST00000639045 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
GABRD-207ENST00000639045 OSCARQ8IYS5 282 aa27.03■■□□□ 1.92
GABRD-207ENST00000639045 CCDC88BA6NC98 1476 aa26.89■■□□□ 1.9
GABRD-207ENST00000639045 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
GABRD-207ENST00000639045 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
GABRD-207ENST00000639045 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
GABRD-207ENST00000639045 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
GABRD-207ENST00000639045 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
GABRD-207ENST00000639045 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
GABRD-207ENST00000639045 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
GABRD-207ENST00000639045 ABCC8Q09428 1581 aa26.61■■□□□ 1.85
GABRD-207ENST00000639045 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
GABRD-207ENST00000639045 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
GABRD-207ENST00000639045 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
GABRD-207ENST00000639045 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
GABRD-207ENST00000639045 TARBP1Q13395 1621 aaKnown RBP26.51■■□□□ 1.83
GABRD-207ENST00000639045 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
GABRD-207ENST00000639045 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
GABRD-207ENST00000639045 RAD54L2Q9Y4B4 1467 aa26.4■■□□□ 1.82
GABRD-207ENST00000639045 FBLN2P98095 1184 aa26.36■■□□□ 1.81
GABRD-207ENST00000639045 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
GABRD-207ENST00000639045 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
GABRD-207ENST00000639045 CHD1O14646 1710 aa26.34■■□□□ 1.81
GABRD-207ENST00000639045 SOGA1O94964 1423 aa26.34■■□□□ 1.81
GABRD-207ENST00000639045 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
GABRD-207ENST00000639045 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
GABRD-207ENST00000639045 CUX1P39880 1505 aa26.22■■□□□ 1.79
GABRD-207ENST00000639045 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
GABRD-207ENST00000639045 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
GABRD-207ENST00000639045 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
GABRD-207ENST00000639045 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.78
GABRD-207ENST00000639045 CHMP7Q8WUX9 453 aaPredicted RBP26.13■■□□□ 1.77
GABRD-207ENST00000639045 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
GABRD-207ENST00000639045 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
GABRD-207ENST00000639045 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
GABRD-207ENST00000639045 GAPVD1Q14C86 1478 aa26■■□□□ 1.75
GABRD-207ENST00000639045 ABCA10Q8WWZ4 1543 aa25.96■■□□□ 1.75
GABRD-207ENST00000639045 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
GABRD-207ENST00000639045 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
GABRD-207ENST00000639045 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
GABRD-207ENST00000639045 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
GABRD-207ENST00000639045 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
GABRD-207ENST00000639045 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
GABRD-207ENST00000639045 NUP160Q12769 1436 aa25.77■■□□□ 1.72
GABRD-207ENST00000639045 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
GABRD-207ENST00000639045 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
GABRD-207ENST00000639045 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
GABRD-207ENST00000639045 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
GABRD-207ENST00000639045 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
GABRD-207ENST00000639045 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
GABRD-207ENST00000639045 ERICH3Q5RHP9 1530 aa25.59■■□□□ 1.69
GABRD-207ENST00000639045 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
GABRD-207ENST00000639045 PRG4Q92954 1404 aaPredicted RBP25.51■■□□□ 1.67
GABRD-207ENST00000639045 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
GABRD-207ENST00000639045 RUSC2Q8N2Y8 1516 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms