RNA–Protein interactions for RNA: ENST00000638999.1

KCNMA1-249, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,527 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-249ENST00000638999 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
KCNMA1-249ENST00000638999 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
KCNMA1-249ENST00000638999 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
KCNMA1-249ENST00000638999 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
KCNMA1-249ENST00000638999 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
KCNMA1-249ENST00000638999 ABCC9O60706 1549 aa19.54■□□□□ 0.72
KCNMA1-249ENST00000638999 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
KCNMA1-249ENST00000638999 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
KCNMA1-249ENST00000638999 NACADO15069 1562 aa19.15■□□□□ 0.66
KCNMA1-249ENST00000638999 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
KCNMA1-249ENST00000638999 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
KCNMA1-249ENST00000638999 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
KCNMA1-249ENST00000638999 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
KCNMA1-249ENST00000638999 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
KCNMA1-249ENST00000638999 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
KCNMA1-249ENST00000638999 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
KCNMA1-249ENST00000638999 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
KCNMA1-249ENST00000638999 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
KCNMA1-249ENST00000638999 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
KCNMA1-249ENST00000638999 WIZO95785 1651 aa18.21■□□□□ 0.51
KCNMA1-249ENST00000638999 SMARCA4P51532 1647 aa18.19■□□□□ 0.5
KCNMA1-249ENST00000638999 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
KCNMA1-249ENST00000638999 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
KCNMA1-249ENST00000638999 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
KCNMA1-249ENST00000638999 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
KCNMA1-249ENST00000638999 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
KCNMA1-249ENST00000638999 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
KCNMA1-249ENST00000638999 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
KCNMA1-249ENST00000638999 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
KCNMA1-249ENST00000638999 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
KCNMA1-249ENST00000638999 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
KCNMA1-249ENST00000638999 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
KCNMA1-249ENST00000638999 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
KCNMA1-249ENST00000638999 ABCC8Q09428 1581 aa17.52■□□□□ 0.4
KCNMA1-249ENST00000638999 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
KCNMA1-249ENST00000638999 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
KCNMA1-249ENST00000638999 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
KCNMA1-249ENST00000638999 CFTRP13569 1480 aa17.33■□□□□ 0.36
KCNMA1-249ENST00000638999 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
KCNMA1-249ENST00000638999 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
KCNMA1-249ENST00000638999 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
KCNMA1-249ENST00000638999 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
KCNMA1-249ENST00000638999 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
KCNMA1-249ENST00000638999 SOGA1O94964 1423 aa17.2■□□□□ 0.34
KCNMA1-249ENST00000638999 NESP48681 1621 aa17.17■□□□□ 0.34
KCNMA1-249ENST00000638999 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
KCNMA1-249ENST00000638999 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
KCNMA1-249ENST00000638999 CUX1P39880 1505 aa17.14■□□□□ 0.33
KCNMA1-249ENST00000638999 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
KCNMA1-249ENST00000638999 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
KCNMA1-249ENST00000638999 EEA1Q15075 1411 aa17.09■□□□□ 0.33
KCNMA1-249ENST00000638999 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
KCNMA1-249ENST00000638999 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
KCNMA1-249ENST00000638999 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
KCNMA1-249ENST00000638999 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
KCNMA1-249ENST00000638999 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
KCNMA1-249ENST00000638999 UBTFP17480 764 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-249ENST00000638999 DNMBPQ6XZF7 1577 aa16.93■□□□□ 0.3
KCNMA1-249ENST00000638999 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
KCNMA1-249ENST00000638999 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
KCNMA1-249ENST00000638999 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
KCNMA1-249ENST00000638999 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
KCNMA1-249ENST00000638999 CUX2O14529 1486 aa16.88■□□□□ 0.29
KCNMA1-249ENST00000638999 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
KCNMA1-249ENST00000638999 KIF21BO75037 1637 aa16.87■□□□□ 0.29
KCNMA1-249ENST00000638999 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
KCNMA1-249ENST00000638999 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
KCNMA1-249ENST00000638999 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
KCNMA1-249ENST00000638999 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
KCNMA1-249ENST00000638999 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
KCNMA1-249ENST00000638999 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
KCNMA1-249ENST00000638999 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
KCNMA1-249ENST00000638999 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
KCNMA1-249ENST00000638999 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
KCNMA1-249ENST00000638999 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
KCNMA1-249ENST00000638999 IGF1RP08069 1367 aa16.75■□□□□ 0.27
KCNMA1-249ENST00000638999 HRCP23327 699 aa16.74■□□□□ 0.27
KCNMA1-249ENST00000638999 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
KCNMA1-249ENST00000638999 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
KCNMA1-249ENST00000638999 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
KCNMA1-249ENST00000638999 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-249ENST00000638999 CLIP1P30622 1438 aa16.68■□□□□ 0.26
KCNMA1-249ENST00000638999 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
KCNMA1-249ENST00000638999 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-249ENST00000638999 WDR62O43379 1518 aa16.63■□□□□ 0.25
KCNMA1-249ENST00000638999 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
KCNMA1-249ENST00000638999 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
KCNMA1-249ENST00000638999 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
KCNMA1-249ENST00000638999 TRIM26Q12899 539 aaPredicted RBP16.59■□□□□ 0.25
KCNMA1-249ENST00000638999 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
KCNMA1-249ENST00000638999 CUL7Q14999 1698 aa16.57■□□□□ 0.24
KCNMA1-249ENST00000638999 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.24
KCNMA1-249ENST00000638999 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
KCNMA1-249ENST00000638999 TTBK1Q5TCY1 1321 aaPredicted RBP16.55■□□□□ 0.24
KCNMA1-249ENST00000638999 ZNF608Q9ULD9 1512 aaPredicted RBP16.52■□□□□ 0.24
KCNMA1-249ENST00000638999 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
KCNMA1-249ENST00000638999 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
KCNMA1-249ENST00000638999 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
KCNMA1-249ENST00000638999 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
KCNMA1-249ENST00000638999 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms