RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
PAX6-242ENST00000638878 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
PAX6-242ENST00000638878 ABCC9O60706 1549 aa20.26■□□□□ 0.83
PAX6-242ENST00000638878 NACADO15069 1562 aa19.64■□□□□ 0.74
PAX6-242ENST00000638878 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
PAX6-242ENST00000638878 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
PAX6-242ENST00000638878 ZCCHC6Q5VYS8 1495 aaKnown RBP19.55■□□□□ 0.72
PAX6-242ENST00000638878 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
PAX6-242ENST00000638878 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
PAX6-242ENST00000638878 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
PAX6-242ENST00000638878 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
PAX6-242ENST00000638878 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
PAX6-242ENST00000638878 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
PAX6-242ENST00000638878 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
PAX6-242ENST00000638878 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
PAX6-242ENST00000638878 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
PAX6-242ENST00000638878 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
PAX6-242ENST00000638878 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
PAX6-242ENST00000638878 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
PAX6-242ENST00000638878 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
PAX6-242ENST00000638878 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
PAX6-242ENST00000638878 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
PAX6-242ENST00000638878 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
PAX6-242ENST00000638878 ATAD2BQ9ULI0 1458 aa18.11■□□□□ 0.49
PAX6-242ENST00000638878 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
PAX6-242ENST00000638878 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.49
PAX6-242ENST00000638878 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
PAX6-242ENST00000638878 HMGXB3Q12766 1538 aa18.02■□□□□ 0.47
PAX6-242ENST00000638878 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
PAX6-242ENST00000638878 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
PAX6-242ENST00000638878 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
PAX6-242ENST00000638878 WIZO95785 1651 aa17.81■□□□□ 0.44
PAX6-242ENST00000638878 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
PAX6-242ENST00000638878 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
PAX6-242ENST00000638878 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
PAX6-242ENST00000638878 NESP48681 1621 aa17.55■□□□□ 0.4
PAX6-242ENST00000638878 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
PAX6-242ENST00000638878 CFTRP13569 1480 aa17.51■□□□□ 0.39
PAX6-242ENST00000638878 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
PAX6-242ENST00000638878 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
PAX6-242ENST00000638878 CUX2O14529 1486 aa17.47■□□□□ 0.39
PAX6-242ENST00000638878 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
PAX6-242ENST00000638878 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
PAX6-242ENST00000638878 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
PAX6-242ENST00000638878 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
PAX6-242ENST00000638878 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
PAX6-242ENST00000638878 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
PAX6-242ENST00000638878 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
PAX6-242ENST00000638878 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
PAX6-242ENST00000638878 WDR62O43379 1518 aa17.23■□□□□ 0.35
PAX6-242ENST00000638878 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
PAX6-242ENST00000638878 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
PAX6-242ENST00000638878 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
PAX6-242ENST00000638878 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
PAX6-242ENST00000638878 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
PAX6-242ENST00000638878 CUX1P39880 1505 aa16.92■□□□□ 0.3
PAX6-242ENST00000638878 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
PAX6-242ENST00000638878 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
PAX6-242ENST00000638878 SOGA1O94964 1423 aa16.89■□□□□ 0.29
PAX6-242ENST00000638878 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
PAX6-242ENST00000638878 TARBP1Q13395 1621 aaKnown RBP16.87■□□□□ 0.29
PAX6-242ENST00000638878 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
PAX6-242ENST00000638878 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
PAX6-242ENST00000638878 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
PAX6-242ENST00000638878 WDR97A6NE52 1622 aa16.82■□□□□ 0.28
PAX6-242ENST00000638878 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
PAX6-242ENST00000638878 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
PAX6-242ENST00000638878 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
PAX6-242ENST00000638878 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
PAX6-242ENST00000638878 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
PAX6-242ENST00000638878 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
PAX6-242ENST00000638878 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
PAX6-242ENST00000638878 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
PAX6-242ENST00000638878 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
PAX6-242ENST00000638878 GAPVD1Q14C86 1478 aa16.68■□□□□ 0.26
PAX6-242ENST00000638878 MAGI1Q96QZ7 1491 aaPredicted RBP16.64■□□□□ 0.25
PAX6-242ENST00000638878 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
PAX6-242ENST00000638878 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
PAX6-242ENST00000638878 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
PAX6-242ENST00000638878 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
PAX6-242ENST00000638878 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
PAX6-242ENST00000638878 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
PAX6-242ENST00000638878 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
PAX6-242ENST00000638878 FBLN2P98095 1184 aa16.52■□□□□ 0.24
PAX6-242ENST00000638878 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
PAX6-242ENST00000638878 IGF1RP08069 1367 aa16.51■□□□□ 0.23
PAX6-242ENST00000638878 CHD1O14646 1710 aa16.48■□□□□ 0.23
PAX6-242ENST00000638878 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
PAX6-242ENST00000638878 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
PAX6-242ENST00000638878 NUP160Q12769 1436 aa16.4■□□□□ 0.22
PAX6-242ENST00000638878 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
PAX6-242ENST00000638878 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
PAX6-242ENST00000638878 RIMBP3CA6NJZ7 1639 aa16.38■□□□□ 0.21
PAX6-242ENST00000638878 RIMBP3BA6NNM3 1639 aa16.38■□□□□ 0.21
PAX6-242ENST00000638878 RIMBP3Q9UFD9 1639 aa16.38■□□□□ 0.21
PAX6-242ENST00000638878 CUL7Q14999 1698 aa16.38■□□□□ 0.21
PAX6-242ENST00000638878 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
PAX6-242ENST00000638878 ARHGEF11O15085 1522 aa16.33■□□□□ 0.2
PAX6-242ENST00000638878 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
PAX6-242ENST00000638878 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms