RNA–Protein interactions for RNA: ENST00000638853.1

PAX6-241, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-241ENST00000638853 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
PAX6-241ENST00000638853 ABCC9O60706 1549 aa27.11■■□□□ 1.93
PAX6-241ENST00000638853 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
PAX6-241ENST00000638853 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
PAX6-241ENST00000638853 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
PAX6-241ENST00000638853 NACADO15069 1562 aa25.27■■□□□ 1.64
PAX6-241ENST00000638853 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
PAX6-241ENST00000638853 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
PAX6-241ENST00000638853 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
PAX6-241ENST00000638853 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
PAX6-241ENST00000638853 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
PAX6-241ENST00000638853 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
PAX6-241ENST00000638853 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
PAX6-241ENST00000638853 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
PAX6-241ENST00000638853 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
PAX6-241ENST00000638853 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
PAX6-241ENST00000638853 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
PAX6-241ENST00000638853 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
PAX6-241ENST00000638853 DNAJC5Q9H3Z4 198 aa24.11■■□□□ 1.45
PAX6-241ENST00000638853 CUX2O14529 1486 aa23.56■■□□□ 1.36
PAX6-241ENST00000638853 ERCC6Q03468 1493 aa23.44■■□□□ 1.34
PAX6-241ENST00000638853 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
PAX6-241ENST00000638853 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
PAX6-241ENST00000638853 NESP48681 1621 aa23.16■■□□□ 1.3
PAX6-241ENST00000638853 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
PAX6-241ENST00000638853 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
PAX6-241ENST00000638853 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
PAX6-241ENST00000638853 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
PAX6-241ENST00000638853 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
PAX6-241ENST00000638853 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
PAX6-241ENST00000638853 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
PAX6-241ENST00000638853 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
PAX6-241ENST00000638853 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
PAX6-241ENST00000638853 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.25
PAX6-241ENST00000638853 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
PAX6-241ENST00000638853 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
PAX6-241ENST00000638853 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
PAX6-241ENST00000638853 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
PAX6-241ENST00000638853 WDR62O43379 1518 aa22.58■■□□□ 1.21
PAX6-241ENST00000638853 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
PAX6-241ENST00000638853 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
PAX6-241ENST00000638853 WIZO95785 1651 aa22.39■■□□□ 1.18
PAX6-241ENST00000638853 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
PAX6-241ENST00000638853 CFTRP13569 1480 aa22.24■■□□□ 1.15
PAX6-241ENST00000638853 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
PAX6-241ENST00000638853 RIMBP3CA6NJZ7 1639 aa22.19■■□□□ 1.14
PAX6-241ENST00000638853 RIMBP3BA6NNM3 1639 aa22.19■■□□□ 1.14
PAX6-241ENST00000638853 RIMBP3Q9UFD9 1639 aa22.19■■□□□ 1.14
PAX6-241ENST00000638853 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
PAX6-241ENST00000638853 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
PAX6-241ENST00000638853 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
PAX6-241ENST00000638853 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
PAX6-241ENST00000638853 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
PAX6-241ENST00000638853 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
PAX6-241ENST00000638853 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
PAX6-241ENST00000638853 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.09
PAX6-241ENST00000638853 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
PAX6-241ENST00000638853 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
PAX6-241ENST00000638853 CHD1O14646 1710 aa21.83■■□□□ 1.09
PAX6-241ENST00000638853 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
PAX6-241ENST00000638853 ARAP1Q96P48 1450 aa21.8■■□□□ 1.08
PAX6-241ENST00000638853 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
PAX6-241ENST00000638853 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.07
PAX6-241ENST00000638853 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
PAX6-241ENST00000638853 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
PAX6-241ENST00000638853 FBLN2P98095 1184 aa21.72■■□□□ 1.07
PAX6-241ENST00000638853 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
PAX6-241ENST00000638853 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
PAX6-241ENST00000638853 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
PAX6-241ENST00000638853 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
PAX6-241ENST00000638853 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
PAX6-241ENST00000638853 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
PAX6-241ENST00000638853 SOGA1O94964 1423 aa21.51■■□□□ 1.03
PAX6-241ENST00000638853 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
PAX6-241ENST00000638853 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
PAX6-241ENST00000638853 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
PAX6-241ENST00000638853 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
PAX6-241ENST00000638853 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
PAX6-241ENST00000638853 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
PAX6-241ENST00000638853 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
PAX6-241ENST00000638853 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
PAX6-241ENST00000638853 CUX1P39880 1505 aa21.33■■□□□ 1
PAX6-241ENST00000638853 PBRM1Q86U86 1689 aa21.3■■□□□ 1
PAX6-241ENST00000638853 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
PAX6-241ENST00000638853 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
PAX6-241ENST00000638853 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
PAX6-241ENST00000638853 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
PAX6-241ENST00000638853 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
PAX6-241ENST00000638853 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
PAX6-241ENST00000638853 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
PAX6-241ENST00000638853 NUP160Q12769 1436 aa21.05■□□□□ 0.96
PAX6-241ENST00000638853 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
PAX6-241ENST00000638853 SHROOM2Q13796 1616 aa21.04■□□□□ 0.96
PAX6-241ENST00000638853 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
PAX6-241ENST00000638853 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
PAX6-241ENST00000638853 PRG4Q92954 1404 aaPredicted RBP20.9■□□□□ 0.94
PAX6-241ENST00000638853 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
PAX6-241ENST00000638853 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
PAX6-241ENST00000638853 FAM69CQ0P6D2 419 aa20.85■□□□□ 0.93
PAX6-241ENST00000638853 ABCC10Q5T3U5 1492 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms