RNA–Protein interactions for RNA: ENST00000638834.1

SPIN3-213, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 856 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-213ENST00000638834 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.59
SPIN3-213ENST00000638834 ABCC9O60706 1549 aa33.63■■■□□ 2.97
SPIN3-213ENST00000638834 CCDC180Q9P1Z9 1646 aa33.63■■■□□ 2.97
SPIN3-213ENST00000638834 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
SPIN3-213ENST00000638834 NACADO15069 1562 aa31.81■■■□□ 2.68
SPIN3-213ENST00000638834 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
SPIN3-213ENST00000638834 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
SPIN3-213ENST00000638834 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
SPIN3-213ENST00000638834 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
SPIN3-213ENST00000638834 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
SPIN3-213ENST00000638834 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
SPIN3-213ENST00000638834 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
SPIN3-213ENST00000638834 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
SPIN3-213ENST00000638834 SHROOM4Q9ULL8 1493 aa30.68■■■□□ 2.5
SPIN3-213ENST00000638834 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
SPIN3-213ENST00000638834 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
SPIN3-213ENST00000638834 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
SPIN3-213ENST00000638834 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
SPIN3-213ENST00000638834 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
SPIN3-213ENST00000638834 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
SPIN3-213ENST00000638834 SMARCA4P51532 1647 aa29.24■■■□□ 2.27
SPIN3-213ENST00000638834 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
SPIN3-213ENST00000638834 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
SPIN3-213ENST00000638834 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
SPIN3-213ENST00000638834 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
SPIN3-213ENST00000638834 CUX2O14529 1486 aa29■■■□□ 2.23
SPIN3-213ENST00000638834 PEG3Q9GZU2 1588 aa29■■■□□ 2.23
SPIN3-213ENST00000638834 ERCC6Q03468 1493 aa28.99■■■□□ 2.23
SPIN3-213ENST00000638834 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
SPIN3-213ENST00000638834 NESP48681 1621 aa28.92■■■□□ 2.22
SPIN3-213ENST00000638834 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
SPIN3-213ENST00000638834 LAMC3Q9Y6N6 1575 aa28.69■■■□□ 2.18
SPIN3-213ENST00000638834 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
SPIN3-213ENST00000638834 WIZO95785 1651 aa28.54■■■□□ 2.16
SPIN3-213ENST00000638834 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.16
SPIN3-213ENST00000638834 PDS5BQ9NTI5 1447 aa28.51■■■□□ 2.15
SPIN3-213ENST00000638834 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
SPIN3-213ENST00000638834 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
SPIN3-213ENST00000638834 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
SPIN3-213ENST00000638834 WDR62O43379 1518 aa28.23■■■□□ 2.11
SPIN3-213ENST00000638834 CFTRP13569 1480 aa28.17■■■□□ 2.1
SPIN3-213ENST00000638834 TOP2AP11388 1531 aaKnown RBP28.17■■■□□ 2.1
SPIN3-213ENST00000638834 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
SPIN3-213ENST00000638834 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
SPIN3-213ENST00000638834 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
SPIN3-213ENST00000638834 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
SPIN3-213ENST00000638834 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
SPIN3-213ENST00000638834 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
SPIN3-213ENST00000638834 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
SPIN3-213ENST00000638834 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
SPIN3-213ENST00000638834 IFT140Q96RY7 1462 aa27.61■■■□□ 2.01
SPIN3-213ENST00000638834 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
SPIN3-213ENST00000638834 ABCC8Q09428 1581 aa27.52■■■□□ 2
SPIN3-213ENST00000638834 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
SPIN3-213ENST00000638834 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
SPIN3-213ENST00000638834 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
SPIN3-213ENST00000638834 POLA1P09884 1462 aaPredicted RBP27.34■■□□□ 1.97
SPIN3-213ENST00000638834 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.97
SPIN3-213ENST00000638834 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
SPIN3-213ENST00000638834 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
SPIN3-213ENST00000638834 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
SPIN3-213ENST00000638834 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
SPIN3-213ENST00000638834 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
SPIN3-213ENST00000638834 CHD1O14646 1710 aa27.19■■□□□ 1.94
SPIN3-213ENST00000638834 SOGA1O94964 1423 aa27.19■■□□□ 1.94
SPIN3-213ENST00000638834 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
SPIN3-213ENST00000638834 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
SPIN3-213ENST00000638834 CUX1P39880 1505 aa27.15■■□□□ 1.94
SPIN3-213ENST00000638834 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
SPIN3-213ENST00000638834 FBLN2P98095 1184 aa27.07■■□□□ 1.92
SPIN3-213ENST00000638834 SNAPC4Q5SXM2 1469 aa27.03■■□□□ 1.92
SPIN3-213ENST00000638834 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
SPIN3-213ENST00000638834 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
SPIN3-213ENST00000638834 GRIN2BQ13224 1484 aa26.96■■□□□ 1.91
SPIN3-213ENST00000638834 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
SPIN3-213ENST00000638834 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
SPIN3-213ENST00000638834 CLASP1Q7Z460 1538 aa26.93■■□□□ 1.9
SPIN3-213ENST00000638834 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
SPIN3-213ENST00000638834 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
SPIN3-213ENST00000638834 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
SPIN3-213ENST00000638834 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
SPIN3-213ENST00000638834 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
SPIN3-213ENST00000638834 PBRM1Q86U86 1689 aa26.83■■□□□ 1.89
SPIN3-213ENST00000638834 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.88
SPIN3-213ENST00000638834 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
SPIN3-213ENST00000638834 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
SPIN3-213ENST00000638834 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
SPIN3-213ENST00000638834 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
SPIN3-213ENST00000638834 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
SPIN3-213ENST00000638834 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
SPIN3-213ENST00000638834 NUP160Q12769 1436 aa26.56■■□□□ 1.84
SPIN3-213ENST00000638834 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
SPIN3-213ENST00000638834 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
SPIN3-213ENST00000638834 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
SPIN3-213ENST00000638834 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
SPIN3-213ENST00000638834 SHROOM2Q13796 1616 aa26.44■■□□□ 1.82
SPIN3-213ENST00000638834 PRG4Q92954 1404 aaPredicted RBP26.27■■□□□ 1.8
SPIN3-213ENST00000638834 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
SPIN3-213ENST00000638834 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
SPIN3-213ENST00000638834 IGF1RP08069 1367 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms