RNA–Protein interactions for RNA: ENST00000638618.1

GFAP-229, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-229ENST00000638618 NISCHQ9Y2I1 1504 aa37.65■■■■□ 3.62
GFAP-229ENST00000638618 ABCC9O60706 1549 aa33.99■■■■□ 3.03
GFAP-229ENST00000638618 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
GFAP-229ENST00000638618 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
GFAP-229ENST00000638618 NACADO15069 1562 aa32.07■■■□□ 2.72
GFAP-229ENST00000638618 DNAJC5BQ9UF47 199 aa31.96■■■□□ 2.71
GFAP-229ENST00000638618 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
GFAP-229ENST00000638618 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
GFAP-229ENST00000638618 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
GFAP-229ENST00000638618 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
GFAP-229ENST00000638618 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
GFAP-229ENST00000638618 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
GFAP-229ENST00000638618 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
GFAP-229ENST00000638618 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
GFAP-229ENST00000638618 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
GFAP-229ENST00000638618 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
GFAP-229ENST00000638618 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
GFAP-229ENST00000638618 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
GFAP-229ENST00000638618 NCAPD3P42695 1498 aa29.59■■■□□ 2.33
GFAP-229ENST00000638618 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
GFAP-229ENST00000638618 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
GFAP-229ENST00000638618 CUX2O14529 1486 aa29.41■■■□□ 2.3
GFAP-229ENST00000638618 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
GFAP-229ENST00000638618 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
GFAP-229ENST00000638618 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
GFAP-229ENST00000638618 HMGXB3Q12766 1538 aa29.37■■■□□ 2.29
GFAP-229ENST00000638618 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
GFAP-229ENST00000638618 BAZ1BQ9UIG0 1483 aaKnown RBP29.19■■■□□ 2.26
GFAP-229ENST00000638618 NESP48681 1621 aa29.13■■■□□ 2.25
GFAP-229ENST00000638618 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
GFAP-229ENST00000638618 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
GFAP-229ENST00000638618 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
GFAP-229ENST00000638618 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
GFAP-229ENST00000638618 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
GFAP-229ENST00000638618 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
GFAP-229ENST00000638618 CADPSQ9ULU8 1353 aa28.68■■■□□ 2.18
GFAP-229ENST00000638618 WIZO95785 1651 aa28.61■■■□□ 2.17
GFAP-229ENST00000638618 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
GFAP-229ENST00000638618 WDR62O43379 1518 aa28.48■■■□□ 2.15
GFAP-229ENST00000638618 CEP164Q9UPV0 1460 aa28.41■■■□□ 2.14
GFAP-229ENST00000638618 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
GFAP-229ENST00000638618 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
GFAP-229ENST00000638618 CFTRP13569 1480 aa28.33■■■□□ 2.13
GFAP-229ENST00000638618 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
GFAP-229ENST00000638618 TRIM41Q8WV44 630 aa28.15■■■□□ 2.1
GFAP-229ENST00000638618 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
GFAP-229ENST00000638618 OSCARQ8IYS5 282 aa28.01■■■□□ 2.07
GFAP-229ENST00000638618 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
GFAP-229ENST00000638618 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
GFAP-229ENST00000638618 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
GFAP-229ENST00000638618 TOPBP1Q92547 1522 aa27.8■■■□□ 2.04
GFAP-229ENST00000638618 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
GFAP-229ENST00000638618 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
GFAP-229ENST00000638618 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
GFAP-229ENST00000638618 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
GFAP-229ENST00000638618 RIMBP3CA6NJZ7 1639 aa27.64■■■□□ 2.02
GFAP-229ENST00000638618 RIMBP3BA6NNM3 1639 aa27.64■■■□□ 2.02
GFAP-229ENST00000638618 RIMBP3Q9UFD9 1639 aa27.64■■■□□ 2.02
GFAP-229ENST00000638618 ARHGEF11O15085 1522 aa27.56■■■□□ 2
GFAP-229ENST00000638618 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
GFAP-229ENST00000638618 AQRO60306 1485 aaKnown RBP eCLIP27.51■■■□□ 2
GFAP-229ENST00000638618 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
GFAP-229ENST00000638618 CHD1O14646 1710 aa27.44■■□□□ 1.98
GFAP-229ENST00000638618 FBLN2P98095 1184 aa27.38■■□□□ 1.97
GFAP-229ENST00000638618 SOGA1O94964 1423 aa27.38■■□□□ 1.97
GFAP-229ENST00000638618 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
GFAP-229ENST00000638618 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
GFAP-229ENST00000638618 TDRD9Q8NDG6 1382 aaKnown RBP27.33■■□□□ 1.97
GFAP-229ENST00000638618 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
GFAP-229ENST00000638618 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
GFAP-229ENST00000638618 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
GFAP-229ENST00000638618 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
GFAP-229ENST00000638618 CUX1P39880 1505 aa27.25■■□□□ 1.95
GFAP-229ENST00000638618 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
GFAP-229ENST00000638618 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
GFAP-229ENST00000638618 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
GFAP-229ENST00000638618 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
GFAP-229ENST00000638618 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
GFAP-229ENST00000638618 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
GFAP-229ENST00000638618 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
GFAP-229ENST00000638618 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
GFAP-229ENST00000638618 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
GFAP-229ENST00000638618 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
GFAP-229ENST00000638618 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
GFAP-229ENST00000638618 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
GFAP-229ENST00000638618 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.89
GFAP-229ENST00000638618 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
GFAP-229ENST00000638618 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
GFAP-229ENST00000638618 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
GFAP-229ENST00000638618 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
GFAP-229ENST00000638618 NUP160Q12769 1436 aa26.73■■□□□ 1.87
GFAP-229ENST00000638618 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
GFAP-229ENST00000638618 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
GFAP-229ENST00000638618 ERCC6L2Q5T890 1561 aa26.68■■□□□ 1.86
GFAP-229ENST00000638618 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
GFAP-229ENST00000638618 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
GFAP-229ENST00000638618 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
GFAP-229ENST00000638618 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
GFAP-229ENST00000638618 JPH4Q96JJ6 628 aa26.44■■□□□ 1.82
GFAP-229ENST00000638618 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms