RNA–Protein interactions for RNA: ENST00000638598.1

SCO2-205, Transcript of SCO2, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO2, Length 664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO2-205ENST00000638598 NISCHQ9Y2I1 1504 aa54.73■■■■■ 6.35
SCO2-205ENST00000638598 CCDC180Q9P1Z9 1646 aa48.96■■■■■ 5.43
SCO2-205ENST00000638598 ABCC9O60706 1549 aa48.77■■■■■ 5.4
SCO2-205ENST00000638598 RB1CC1Q8TDY2 1594 aa46.47■■■■■ 5.03
SCO2-205ENST00000638598 NACADO15069 1562 aa46.22■■■■■ 4.99
SCO2-205ENST00000638598 DCAF8L2P0C7V8 631 aa46.1■■■■■ 4.97
SCO2-205ENST00000638598 MYO15BQ96JP2 1530 aa45.66■■■■■ 4.9
SCO2-205ENST00000638598 DNAJC5BQ9UF47 199 aa45.63■■■■■ 4.9
SCO2-205ENST00000638598 UNC13AQ9UPW8 1703 aa45.55■■■■■ 4.88
SCO2-205ENST00000638598 PABPN1Q86U42 306 aaKnown RBP eCLIP45.48■■■■■ 4.87
SCO2-205ENST00000638598 ZCCHC6Q5VYS8 1495 aaKnown RBP45.4■■■■■ 4.86
SCO2-205ENST00000638598 BICRAQ9NZM4 1560 aa45.2■■■■■ 4.83
SCO2-205ENST00000638598 DCAF1Q9Y4B6 1507 aa45.18■■■■■ 4.82
SCO2-205ENST00000638598 SCRIBQ14160 1630 aa44.67■■■■■ 4.74
SCO2-205ENST00000638598 SHROOM4Q9ULL8 1493 aa44.47■■■■■ 4.71
SCO2-205ENST00000638598 CC2D2AQ9P2K1 1620 aa44.07■■■■■ 4.65
SCO2-205ENST00000638598 EIF4G1Q04637 1599 aaKnown RBP44.02■■■■■ 4.64
SCO2-205ENST00000638598 CECR2Q9BXF3 1484 aa43.88■■■■■ 4.61
SCO2-205ENST00000638598 NCAPD3P42695 1498 aa42.7■■■■■ 4.43
SCO2-205ENST00000638598 SMARCA4P51532 1647 aa42.64■■■■■ 4.42
SCO2-205ENST00000638598 ATAD2BQ9ULI0 1458 aa42.62■■■■■ 4.41
SCO2-205ENST00000638598 SMARCA2P51531 1590 aa42.46■■■■■ 4.39
SCO2-205ENST00000638598 BAZ1AQ9NRL2 1556 aaPredicted RBP42.42■■■■■ 4.38
SCO2-205ENST00000638598 HMGXB3Q12766 1538 aa42.37■■■■■ 4.37
SCO2-205ENST00000638598 MROH2BQ7Z745 1585 aa42.21■■■■■ 4.35
SCO2-205ENST00000638598 PEG3Q9GZU2 1588 aa42.21■■■■■ 4.35
SCO2-205ENST00000638598 BAZ1BQ9UIG0 1483 aaKnown RBP42.18■■■■■ 4.34
SCO2-205ENST00000638598 ERCC6Q03468 1493 aa42.02■■■■■ 4.32
SCO2-205ENST00000638598 NESP48681 1621 aa42■■■■■ 4.31
SCO2-205ENST00000638598 CUX2O14529 1486 aa41.86■■■■■ 4.29
SCO2-205ENST00000638598 WIZO95785 1651 aa41.73■■■■■ 4.27
SCO2-205ENST00000638598 LAMC3Q9Y6N6 1575 aa41.67■■■■■ 4.26
SCO2-205ENST00000638598 DNAJC5Q9H3Z4 198 aa41.63■■■■■ 4.25
SCO2-205ENST00000638598 THOC2Q8NI27 1593 aaKnown RBP41.49■■■■■ 4.23
SCO2-205ENST00000638598 KIF21AQ7Z4S6 1674 aa41.46■■■■■ 4.23
SCO2-205ENST00000638598 CADPSQ9ULU8 1353 aa41.41■■■■■ 4.22
SCO2-205ENST00000638598 RSF1Q96T23 1441 aaPredicted RBP41.41■■■■■ 4.22
SCO2-205ENST00000638598 PDS5BQ9NTI5 1447 aa41.41■■■■■ 4.22
SCO2-205ENST00000638598 TOP2AP11388 1531 aaKnown RBP41.15■■■■■ 4.18
SCO2-205ENST00000638598 MRC2Q9UBG0 1479 aa41.05■■■■■ 4.16
SCO2-205ENST00000638598 CFTRP13569 1480 aa40.99■■■■■ 4.15
SCO2-205ENST00000638598 WDR62O43379 1518 aa40.95■■■■■ 4.15
SCO2-205ENST00000638598 FANCD2Q9BXW9 1451 aa40.94■■■■■ 4.14
SCO2-205ENST00000638598 CEP164Q9UPV0 1460 aa40.93■■■■■ 4.14
SCO2-205ENST00000638598 CCDC88BA6NC98 1476 aa40.73■■■■■ 4.11
SCO2-205ENST00000638598 URB2Q14146 1524 aaKnown RBP40.62■■■■■ 4.09
SCO2-205ENST00000638598 PRDM2Q13029 1718 aa40.62■■■■■ 4.09
SCO2-205ENST00000638598 TOPBP1Q92547 1522 aa40.21■■■■■ 4.03
SCO2-205ENST00000638598 IFT140Q96RY7 1462 aa40.1■■■■■ 4.01
SCO2-205ENST00000638598 ZNF608Q9ULD9 1512 aaPredicted RBP40.09■■■■■ 4.01
SCO2-205ENST00000638598 ABCC8Q09428 1581 aa40.07■■■■■ 4.01
SCO2-205ENST00000638598 DNMBPQ6XZF7 1577 aa40.06■■■■■ 4
SCO2-205ENST00000638598 OSCARQ8IYS5 282 aa40.03■■■■■ 4
SCO2-205ENST00000638598 TRIM41Q8WV44 630 aa39.9■■■■□ 3.98
SCO2-205ENST00000638598 TARBP1Q13395 1621 aaKnown RBP39.85■■■■□ 3.97
SCO2-205ENST00000638598 EIF4G3O43432 1585 aaKnown RBP39.84■■■■□ 3.97
SCO2-205ENST00000638598 POLA1P09884 1462 aaPredicted RBP39.81■■■■□ 3.96
SCO2-205ENST00000638598 SUPT5HO00267 1087 aaKnown RBP39.78■■■■□ 3.96
SCO2-205ENST00000638598 AQRO60306 1485 aaKnown RBP eCLIP39.75■■■■□ 3.951e-6■■□□□ 14.5
SCO2-205ENST00000638598 RAD54L2Q9Y4B4 1467 aa39.69■■■■□ 3.94
SCO2-205ENST00000638598 CUX1P39880 1505 aa39.63■■■■□ 3.93
SCO2-205ENST00000638598 SOGA1O94964 1423 aa39.63■■■■□ 3.93
SCO2-205ENST00000638598 FGD5Q6ZNL6 1462 aa39.6■■■■□ 3.93
SCO2-205ENST00000638598 TDRD9Q8NDG6 1382 aaKnown RBP39.55■■■■□ 3.92
SCO2-205ENST00000638598 CHD1O14646 1710 aa39.53■■■■□ 3.92
SCO2-205ENST00000638598 RIMBP3CA6NJZ7 1639 aa39.51■■■■□ 3.92
SCO2-205ENST00000638598 RIMBP3BA6NNM3 1639 aa39.51■■■■□ 3.92
SCO2-205ENST00000638598 RIMBP3Q9UFD9 1639 aa39.51■■■■□ 3.92
SCO2-205ENST00000638598 FBLN2P98095 1184 aa39.41■■■■□ 3.9
SCO2-205ENST00000638598 ARHGEF11O15085 1522 aa39.4■■■■□ 3.9
SCO2-205ENST00000638598 WDR97A6NE52 1622 aa39.37■■■■□ 3.89
SCO2-205ENST00000638598 SNAPC4Q5SXM2 1469 aa39.32■■■■□ 3.89
SCO2-205ENST00000638598 GRIN2BQ13224 1484 aa39.23■■■■□ 3.87
SCO2-205ENST00000638598 MAGI1Q96QZ7 1491 aaPredicted RBP39.19■■■■□ 3.86
SCO2-205ENST00000638598 CHMP7Q8WUX9 453 aaPredicted RBP39.15■■■■□ 3.86
SCO2-205ENST00000638598 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
SCO2-205ENST00000638598 GAPVD1Q14C86 1478 aa39.14■■■■□ 3.86
SCO2-205ENST00000638598 PBRM1Q86U86 1689 aa39.13■■■■□ 3.86
SCO2-205ENST00000638598 CYB5RLQ6IPT4 315 aa39.11■■■■□ 3.85
SCO2-205ENST00000638598 ABCA5Q8WWZ7 1642 aa39.08■■■■□ 3.85
SCO2-205ENST00000638598 SYNJ2O15056 1496 aa39.07■■■■□ 3.85
SCO2-205ENST00000638598 CLASP1Q7Z460 1538 aa39.06■■■■□ 3.84
SCO2-205ENST00000638598 ARAP1Q96P48 1450 aa39.05■■■■□ 3.84
SCO2-205ENST00000638598 BIVM-ERCC5R4GMW8 1640 aa39.04■■■■□ 3.84
SCO2-205ENST00000638598 TOP2BQ02880 1626 aa39.03■■■■□ 3.84
SCO2-205ENST00000638598 SYNJ1O43426 1573 aa39.03■■■■□ 3.84
SCO2-205ENST00000638598 WRNQ14191 1432 aaPredicted RBP eCLIP39.02■■■■□ 3.84
SCO2-205ENST00000638598 ADAMTS12P58397 1594 aa38.75■■■■□ 3.79
SCO2-205ENST00000638598 GRIN2AQ12879 1464 aa38.74■■■■□ 3.79
SCO2-205ENST00000638598 FHAD1B1AJZ9 1412 aa38.64■■■■□ 3.78
SCO2-205ENST00000638598 ERICH3Q5RHP9 1530 aa38.64■■■■□ 3.78
SCO2-205ENST00000638598 CEP170Q5SW79 1584 aa38.62■■■■□ 3.77
SCO2-205ENST00000638598 NUP160Q12769 1436 aa38.61■■■■□ 3.77
SCO2-205ENST00000638598 TRHP20396 242 aaPredicted RBP38.56■■■■□ 3.76
SCO2-205ENST00000638598 ERCC6L2Q5T890 1561 aa38.53■■■■□ 3.76
SCO2-205ENST00000638598 SHROOM2Q13796 1616 aa38.42■■■■□ 3.74
SCO2-205ENST00000638598 IGF1RP08069 1367 aa38.27■■■■□ 3.72
SCO2-205ENST00000638598 KIF27Q86VH2 1401 aa38.24■■■■□ 3.71
SCO2-205ENST00000638598 JPH4Q96JJ6 628 aa38.24■■■■□ 3.71
SCO2-205ENST00000638598 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms