RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 NISCHQ9Y2I1 1504 aa36.72■■■■□ 3.47
HCG27-205ENST00000638546 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
HCG27-205ENST00000638546 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
HCG27-205ENST00000638546 DCAF1Q9Y4B6 1507 aa30.35■■■□□ 2.45
HCG27-205ENST00000638546 DCAF8L2P0C7V8 631 aa30.33■■■□□ 2.45
HCG27-205ENST00000638546 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
HCG27-205ENST00000638546 ABCC9O60706 1549 aa30.18■■■□□ 2.42
HCG27-205ENST00000638546 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
HCG27-205ENST00000638546 NACADO15069 1562 aa29.59■■■□□ 2.33
HCG27-205ENST00000638546 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
HCG27-205ENST00000638546 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
HCG27-205ENST00000638546 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.27
HCG27-205ENST00000638546 RSF1Q96T23 1441 aaPredicted RBP28.64■■■□□ 2.18
HCG27-205ENST00000638546 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
HCG27-205ENST00000638546 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
HCG27-205ENST00000638546 MROH2BQ7Z745 1585 aa28.38■■■□□ 2.13
HCG27-205ENST00000638546 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
HCG27-205ENST00000638546 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
HCG27-205ENST00000638546 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
HCG27-205ENST00000638546 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
HCG27-205ENST00000638546 WIZO95785 1651 aa28.12■■■□□ 2.09
HCG27-205ENST00000638546 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
HCG27-205ENST00000638546 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.05
HCG27-205ENST00000638546 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
HCG27-205ENST00000638546 PEG3Q9GZU2 1588 aa27.75■■■□□ 2.03
HCG27-205ENST00000638546 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
HCG27-205ENST00000638546 ATAD2BQ9ULI0 1458 aa27.63■■■□□ 2.01
HCG27-205ENST00000638546 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
HCG27-205ENST00000638546 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
HCG27-205ENST00000638546 TRIM41Q8WV44 630 aa27.52■■■□□ 2
HCG27-205ENST00000638546 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
HCG27-205ENST00000638546 NCAPD3P42695 1498 aa27.35■■□□□ 1.97
HCG27-205ENST00000638546 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
HCG27-205ENST00000638546 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
HCG27-205ENST00000638546 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
HCG27-205ENST00000638546 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
HCG27-205ENST00000638546 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
HCG27-205ENST00000638546 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
HCG27-205ENST00000638546 CFTRP13569 1480 aa26.82■■□□□ 1.88
HCG27-205ENST00000638546 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
HCG27-205ENST00000638546 EEA1Q15075 1411 aa26.74■■□□□ 1.87
HCG27-205ENST00000638546 SOGA1O94964 1423 aa26.72■■□□□ 1.87
HCG27-205ENST00000638546 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
HCG27-205ENST00000638546 EHMT2Q96KQ7 1210 aa26.63■■□□□ 1.85
HCG27-205ENST00000638546 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
HCG27-205ENST00000638546 CSRNP3Q8WYN3 585 aa26.62■■□□□ 1.85
HCG27-205ENST00000638546 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
HCG27-205ENST00000638546 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
HCG27-205ENST00000638546 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
HCG27-205ENST00000638546 CUX1P39880 1505 aa26.51■■□□□ 1.83
HCG27-205ENST00000638546 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.81
HCG27-205ENST00000638546 GOLGA3Q08378 1498 aa26.38■■□□□ 1.81
HCG27-205ENST00000638546 FANCD2Q9BXW9 1451 aa26.37■■□□□ 1.81
HCG27-205ENST00000638546 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
HCG27-205ENST00000638546 NESP48681 1621 aa26.31■■□□□ 1.8
HCG27-205ENST00000638546 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
HCG27-205ENST00000638546 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
HCG27-205ENST00000638546 KIF21BO75037 1637 aa26.31■■□□□ 1.8
HCG27-205ENST00000638546 KIF27Q86VH2 1401 aa26.25■■□□□ 1.79
HCG27-205ENST00000638546 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
HCG27-205ENST00000638546 CEP162Q5TB80 1403 aa26.23■■□□□ 1.79
HCG27-205ENST00000638546 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
HCG27-205ENST00000638546 TRIM26Q12899 539 aaPredicted RBP26.17■■□□□ 1.78
HCG27-205ENST00000638546 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
HCG27-205ENST00000638546 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
HCG27-205ENST00000638546 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
HCG27-205ENST00000638546 PRXQ9BXM0 1461 aa26.13■■□□□ 1.77
HCG27-205ENST00000638546 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
HCG27-205ENST00000638546 CUX2O14529 1486 aa26.1■■□□□ 1.77
HCG27-205ENST00000638546 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
HCG27-205ENST00000638546 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
HCG27-205ENST00000638546 IGF1RP08069 1367 aa26■■□□□ 1.75
HCG27-205ENST00000638546 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
HCG27-205ENST00000638546 KIF21AQ7Z4S6 1674 aa25.98■■□□□ 1.75
HCG27-205ENST00000638546 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
HCG27-205ENST00000638546 CLIP1P30622 1438 aa25.97■■□□□ 1.75
HCG27-205ENST00000638546 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
HCG27-205ENST00000638546 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
HCG27-205ENST00000638546 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
HCG27-205ENST00000638546 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
HCG27-205ENST00000638546 PPARGC1BQ86YN6 1023 aaKnown RBP25.85■■□□□ 1.73
HCG27-205ENST00000638546 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
HCG27-205ENST00000638546 VPS8Q8N3P4 1428 aa25.78■■□□□ 1.72
HCG27-205ENST00000638546 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
HCG27-205ENST00000638546 HRCP23327 699 aa25.75■■□□□ 1.71
HCG27-205ENST00000638546 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
HCG27-205ENST00000638546 THOC2Q8NI27 1593 aaKnown RBP25.72■■□□□ 1.71
HCG27-205ENST00000638546 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.7
HCG27-205ENST00000638546 WDR62O43379 1518 aa25.68■■□□□ 1.7
HCG27-205ENST00000638546 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
HCG27-205ENST00000638546 CUL7Q14999 1698 aa25.66■■□□□ 1.7
HCG27-205ENST00000638546 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
HCG27-205ENST00000638546 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
HCG27-205ENST00000638546 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
HCG27-205ENST00000638546 APLP2Q06481 763 aa25.61■■□□□ 1.69
HCG27-205ENST00000638546 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
HCG27-205ENST00000638546 TTBK1Q5TCY1 1321 aaPredicted RBP25.56■■□□□ 1.68
HCG27-205ENST00000638546 IFT140Q96RY7 1462 aa25.54■■□□□ 1.68
HCG27-205ENST00000638546 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.672e-9■■■■□ 24.7
HCG27-205ENST00000638546 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms