RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 NISCHQ9Y2I1 1504 aa35.76■■■■□ 3.31
KCNMA1-239ENST00000638531 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
KCNMA1-239ENST00000638531 ABCC9O60706 1549 aa31.15■■■□□ 2.58
KCNMA1-239ENST00000638531 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
KCNMA1-239ENST00000638531 NACADO15069 1562 aa30■■■□□ 2.39
KCNMA1-239ENST00000638531 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
KCNMA1-239ENST00000638531 ZCCHC6Q5VYS8 1495 aaKnown RBP29.81■■■□□ 2.36
KCNMA1-239ENST00000638531 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
KCNMA1-239ENST00000638531 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
KCNMA1-239ENST00000638531 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
KCNMA1-239ENST00000638531 BICRAQ9NZM4 1560 aa29.17■■■□□ 2.26
KCNMA1-239ENST00000638531 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
KCNMA1-239ENST00000638531 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
KCNMA1-239ENST00000638531 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
KCNMA1-239ENST00000638531 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
KCNMA1-239ENST00000638531 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
KCNMA1-239ENST00000638531 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
KCNMA1-239ENST00000638531 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
KCNMA1-239ENST00000638531 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
KCNMA1-239ENST00000638531 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.03
KCNMA1-239ENST00000638531 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
KCNMA1-239ENST00000638531 NCAPD3P42695 1498 aa27.6■■■□□ 2.01
KCNMA1-239ENST00000638531 ATAD2BQ9ULI0 1458 aa27.6■■■□□ 2.01
KCNMA1-239ENST00000638531 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
KCNMA1-239ENST00000638531 HMGXB3Q12766 1538 aa27.57■■■□□ 2
KCNMA1-239ENST00000638531 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
KCNMA1-239ENST00000638531 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.98
KCNMA1-239ENST00000638531 WIZO95785 1651 aa27.3■■□□□ 1.96
KCNMA1-239ENST00000638531 DNAJC5Q9H3Z4 198 aa27.18■■□□□ 1.94
KCNMA1-239ENST00000638531 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
KCNMA1-239ENST00000638531 TOP2AP11388 1531 aaKnown RBP27.01■■□□□ 1.91
KCNMA1-239ENST00000638531 LAMC3Q9Y6N6 1575 aa27■■□□□ 1.91
KCNMA1-239ENST00000638531 NESP48681 1621 aa26.94■■□□□ 1.9
KCNMA1-239ENST00000638531 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
KCNMA1-239ENST00000638531 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
KCNMA1-239ENST00000638531 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
KCNMA1-239ENST00000638531 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
KCNMA1-239ENST00000638531 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
KCNMA1-239ENST00000638531 CUX2O14529 1486 aa26.69■■□□□ 1.86
KCNMA1-239ENST00000638531 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
KCNMA1-239ENST00000638531 CFTRP13569 1480 aa26.62■■□□□ 1.85
KCNMA1-239ENST00000638531 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
KCNMA1-239ENST00000638531 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
KCNMA1-239ENST00000638531 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
KCNMA1-239ENST00000638531 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
KCNMA1-239ENST00000638531 WDR62O43379 1518 aa26.45■■□□□ 1.83
KCNMA1-239ENST00000638531 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
KCNMA1-239ENST00000638531 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
KCNMA1-239ENST00000638531 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
KCNMA1-239ENST00000638531 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
KCNMA1-239ENST00000638531 TOPBP1Q92547 1522 aa26.08■■□□□ 1.77
KCNMA1-239ENST00000638531 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
KCNMA1-239ENST00000638531 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
KCNMA1-239ENST00000638531 CUX1P39880 1505 aa25.86■■□□□ 1.73
KCNMA1-239ENST00000638531 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
KCNMA1-239ENST00000638531 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
KCNMA1-239ENST00000638531 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
KCNMA1-239ENST00000638531 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
KCNMA1-239ENST00000638531 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
KCNMA1-239ENST00000638531 WDR97A6NE52 1622 aa25.76■■□□□ 1.71
KCNMA1-239ENST00000638531 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
KCNMA1-239ENST00000638531 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
KCNMA1-239ENST00000638531 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
KCNMA1-239ENST00000638531 SOGA1O94964 1423 aa25.64■■□□□ 1.7
KCNMA1-239ENST00000638531 SYNJ1O43426 1573 aa25.64■■□□□ 1.69
KCNMA1-239ENST00000638531 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
KCNMA1-239ENST00000638531 CHD1O14646 1710 aa25.57■■□□□ 1.68
KCNMA1-239ENST00000638531 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.68
KCNMA1-239ENST00000638531 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
KCNMA1-239ENST00000638531 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
KCNMA1-239ENST00000638531 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
KCNMA1-239ENST00000638531 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
KCNMA1-239ENST00000638531 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
KCNMA1-239ENST00000638531 MAGI1Q96QZ7 1491 aaPredicted RBP25.42■■□□□ 1.66
KCNMA1-239ENST00000638531 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
KCNMA1-239ENST00000638531 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
KCNMA1-239ENST00000638531 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
KCNMA1-239ENST00000638531 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
KCNMA1-239ENST00000638531 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
KCNMA1-239ENST00000638531 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
KCNMA1-239ENST00000638531 RIMBP3CA6NJZ7 1639 aa25.22■■□□□ 1.63
KCNMA1-239ENST00000638531 RIMBP3BA6NNM3 1639 aa25.22■■□□□ 1.63
KCNMA1-239ENST00000638531 RIMBP3Q9UFD9 1639 aa25.22■■□□□ 1.63
KCNMA1-239ENST00000638531 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
KCNMA1-239ENST00000638531 FBLN2P98095 1184 aa25.17■■□□□ 1.62
KCNMA1-239ENST00000638531 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
KCNMA1-239ENST00000638531 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
KCNMA1-239ENST00000638531 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
KCNMA1-239ENST00000638531 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
KCNMA1-239ENST00000638531 CUL7Q14999 1698 aa25.1■■□□□ 1.61
KCNMA1-239ENST00000638531 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
KCNMA1-239ENST00000638531 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
KCNMA1-239ENST00000638531 NUP160Q12769 1436 aa25.02■■□□□ 1.6
KCNMA1-239ENST00000638531 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
KCNMA1-239ENST00000638531 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
KCNMA1-239ENST00000638531 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
KCNMA1-239ENST00000638531 IGF1RP08069 1367 aa24.9■■□□□ 1.58
KCNMA1-239ENST00000638531 ERCC6L2Q5T890 1561 aa24.79■■□□□ 1.56
KCNMA1-239ENST00000638531 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
KCNMA1-239ENST00000638531 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms