RNA–Protein interactions for RNA: ENST00000638411.1

GABRD-202, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-202ENST00000638411 NISCHQ9Y2I1 1504 aa45.92■■■■■ 4.94
GABRD-202ENST00000638411 CCDC180Q9P1Z9 1646 aa40.96■■■■■ 4.15
GABRD-202ENST00000638411 ABCC9O60706 1549 aa40.12■■■■■ 4.01
GABRD-202ENST00000638411 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.76
GABRD-202ENST00000638411 NACADO15069 1562 aa38.49■■■■□ 3.75
GABRD-202ENST00000638411 ZCCHC6Q5VYS8 1495 aaKnown RBP38.25■■■■□ 3.71
GABRD-202ENST00000638411 MYO15BQ96JP2 1530 aa38.24■■■■□ 3.71
GABRD-202ENST00000638411 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
GABRD-202ENST00000638411 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
GABRD-202ENST00000638411 UNC13AQ9UPW8 1703 aa37.81■■■■□ 3.64
GABRD-202ENST00000638411 BICRAQ9NZM4 1560 aa37.46■■■■□ 3.59
GABRD-202ENST00000638411 PABPN1Q86U42 306 aaKnown RBP eCLIP37.4■■■■□ 3.58
GABRD-202ENST00000638411 SCRIBQ14160 1630 aa37.31■■■■□ 3.56
GABRD-202ENST00000638411 SHROOM4Q9ULL8 1493 aa37.03■■■■□ 3.52
GABRD-202ENST00000638411 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
GABRD-202ENST00000638411 EIF4G1Q04637 1599 aaKnown RBP36.45■■■■□ 3.43
GABRD-202ENST00000638411 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
GABRD-202ENST00000638411 CECR2Q9BXF3 1484 aa36.07■■■■□ 3.37
GABRD-202ENST00000638411 SMARCA4P51532 1647 aa35.7■■■■□ 3.31
GABRD-202ENST00000638411 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
GABRD-202ENST00000638411 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
GABRD-202ENST00000638411 ATAD2BQ9ULI0 1458 aa35.5■■■■□ 3.27
GABRD-202ENST00000638411 SMARCA2P51531 1590 aa35.46■■■■□ 3.27
GABRD-202ENST00000638411 MROH2BQ7Z745 1585 aa35.39■■■■□ 3.26
GABRD-202ENST00000638411 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
GABRD-202ENST00000638411 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
GABRD-202ENST00000638411 BAZ1BQ9UIG0 1483 aaKnown RBP35.18■■■■□ 3.22
GABRD-202ENST00000638411 WIZO95785 1651 aa35.03■■■■□ 3.2
GABRD-202ENST00000638411 RSF1Q96T23 1441 aaPredicted RBP34.9■■■■□ 3.18
GABRD-202ENST00000638411 NESP48681 1621 aa34.7■■■■□ 3.15
GABRD-202ENST00000638411 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
GABRD-202ENST00000638411 LAMC3Q9Y6N6 1575 aa34.62■■■■□ 3.13
GABRD-202ENST00000638411 ERCC6Q03468 1493 aa34.57■■■■□ 3.12
GABRD-202ENST00000638411 CADPSQ9ULU8 1353 aa34.42■■■■□ 3.1
GABRD-202ENST00000638411 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
GABRD-202ENST00000638411 PDS5BQ9NTI5 1447 aa34.32■■■■□ 3.08
GABRD-202ENST00000638411 CUX2O14529 1486 aa34.32■■■■□ 3.08
GABRD-202ENST00000638411 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
GABRD-202ENST00000638411 CFTRP13569 1480 aa34.23■■■■□ 3.07
GABRD-202ENST00000638411 CCDC88BA6NC98 1476 aa34.19■■■■□ 3.06
GABRD-202ENST00000638411 PRDM2Q13029 1718 aa34.07■■■■□ 3.04
GABRD-202ENST00000638411 FANCD2Q9BXW9 1451 aa34.06■■■■□ 3.04
GABRD-202ENST00000638411 CEP164Q9UPV0 1460 aa34.03■■■■□ 3.04
GABRD-202ENST00000638411 MRC2Q9UBG0 1479 aa34.02■■■■□ 3.04
GABRD-202ENST00000638411 WDR62O43379 1518 aa33.95■■■■□ 3.03
GABRD-202ENST00000638411 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
GABRD-202ENST00000638411 URB2Q14146 1524 aaKnown RBP33.75■■■□□ 2.99
GABRD-202ENST00000638411 TOPBP1Q92547 1522 aa33.51■■■□□ 2.95
GABRD-202ENST00000638411 DNMBPQ6XZF7 1577 aa33.47■■■□□ 2.95
GABRD-202ENST00000638411 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
GABRD-202ENST00000638411 DNAJC5Q9H3Z4 198 aa33.37■■■□□ 2.93
GABRD-202ENST00000638411 IFT140Q96RY7 1462 aa33.31■■■□□ 2.92
GABRD-202ENST00000638411 POLA1P09884 1462 aaPredicted RBP33.22■■■□□ 2.91
GABRD-202ENST00000638411 CUX1P39880 1505 aa33.22■■■□□ 2.91
GABRD-202ENST00000638411 TARBP1Q13395 1621 aaKnown RBP33.2■■■□□ 2.91
GABRD-202ENST00000638411 ZNF608Q9ULD9 1512 aaPredicted RBP33.19■■■□□ 2.9
GABRD-202ENST00000638411 EIF4G3O43432 1585 aaKnown RBP33.11■■■□□ 2.89
GABRD-202ENST00000638411 FGD5Q6ZNL6 1462 aa33.11■■■□□ 2.89
GABRD-202ENST00000638411 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
GABRD-202ENST00000638411 SOGA1O94964 1423 aa33.02■■■□□ 2.88
GABRD-202ENST00000638411 AQRO60306 1485 aaKnown RBP eCLIP32.95■■■□□ 2.87
GABRD-202ENST00000638411 WDR97A6NE52 1622 aa32.94■■■□□ 2.86
GABRD-202ENST00000638411 BIVM-ERCC5R4GMW8 1640 aa32.93■■■□□ 2.86
GABRD-202ENST00000638411 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
GABRD-202ENST00000638411 WRNQ14191 1432 aaPredicted RBP eCLIP32.9■■■□□ 2.86
GABRD-202ENST00000638411 SYNJ1O43426 1573 aa32.89■■■□□ 2.86
GABRD-202ENST00000638411 TDRD9Q8NDG6 1382 aaKnown RBP32.84■■■□□ 2.85
GABRD-202ENST00000638411 ABCA10Q8WWZ4 1543 aa32.79■■■□□ 2.84
GABRD-202ENST00000638411 OSCARQ8IYS5 282 aa32.76■■■□□ 2.83
GABRD-202ENST00000638411 CHD1O14646 1710 aa32.74■■■□□ 2.83
GABRD-202ENST00000638411 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
GABRD-202ENST00000638411 PBRM1Q86U86 1689 aa32.7■■■□□ 2.83
GABRD-202ENST00000638411 GRIN2BQ13224 1484 aa32.68■■■□□ 2.82
GABRD-202ENST00000638411 SNAPC4Q5SXM2 1469 aa32.67■■■□□ 2.82
GABRD-202ENST00000638411 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
GABRD-202ENST00000638411 MAGI1Q96QZ7 1491 aaPredicted RBP32.63■■■□□ 2.81
GABRD-202ENST00000638411 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
GABRD-202ENST00000638411 FBLN2P98095 1184 aa32.49■■■□□ 2.79
GABRD-202ENST00000638411 ADAMTS12P58397 1594 aa32.41■■■□□ 2.78
GABRD-202ENST00000638411 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
GABRD-202ENST00000638411 ERICH3Q5RHP9 1530 aa32.4■■■□□ 2.78
GABRD-202ENST00000638411 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
GABRD-202ENST00000638411 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
GABRD-202ENST00000638411 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
GABRD-202ENST00000638411 CLASP1Q7Z460 1538 aa32.36■■■□□ 2.77
GABRD-202ENST00000638411 ARHGEF11O15085 1522 aa32.34■■■□□ 2.77
GABRD-202ENST00000638411 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
GABRD-202ENST00000638411 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
GABRD-202ENST00000638411 KIF27Q86VH2 1401 aa32.2■■■□□ 2.75
GABRD-202ENST00000638411 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
GABRD-202ENST00000638411 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
GABRD-202ENST00000638411 NUP160Q12769 1436 aa32.16■■■□□ 2.74
GABRD-202ENST00000638411 CUL7Q14999 1698 aa32.1■■■□□ 2.73
GABRD-202ENST00000638411 IGF1RP08069 1367 aa32.09■■■□□ 2.73
GABRD-202ENST00000638411 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
GABRD-202ENST00000638411 SHROOM2Q13796 1616 aa31.99■■■□□ 2.71
GABRD-202ENST00000638411 RUSC2Q8N2Y8 1516 aa31.95■■■□□ 2.7
GABRD-202ENST00000638411 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
GABRD-202ENST00000638411 ERCC6L2Q5T890 1561 aa31.9■■■□□ 2.7
GABRD-202ENST00000638411 CARMIL1Q5VZK9 1371 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms