RNA–Protein interactions for RNA: ENST00000638370.1

KCNMA1-235, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-235ENST00000638370 NISCHQ9Y2I1 1504 aa24.41■■□□□ 1.5
KCNMA1-235ENST00000638370 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
KCNMA1-235ENST00000638370 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
KCNMA1-235ENST00000638370 ABCC9O60706 1549 aa20.73■□□□□ 0.91
KCNMA1-235ENST00000638370 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
KCNMA1-235ENST00000638370 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.83
KCNMA1-235ENST00000638370 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
KCNMA1-235ENST00000638370 NACADO15069 1562 aa20.11■□□□□ 0.81
KCNMA1-235ENST00000638370 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.81
KCNMA1-235ENST00000638370 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
KCNMA1-235ENST00000638370 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
KCNMA1-235ENST00000638370 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
KCNMA1-235ENST00000638370 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
KCNMA1-235ENST00000638370 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
KCNMA1-235ENST00000638370 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
KCNMA1-235ENST00000638370 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
KCNMA1-235ENST00000638370 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
KCNMA1-235ENST00000638370 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
KCNMA1-235ENST00000638370 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
KCNMA1-235ENST00000638370 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
KCNMA1-235ENST00000638370 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
KCNMA1-235ENST00000638370 CC2D2AQ9P2K1 1620 aa18.75■□□□□ 0.59
KCNMA1-235ENST00000638370 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
KCNMA1-235ENST00000638370 WIZO95785 1651 aa18.68■□□□□ 0.58
KCNMA1-235ENST00000638370 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
KCNMA1-235ENST00000638370 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
KCNMA1-235ENST00000638370 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
KCNMA1-235ENST00000638370 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
KCNMA1-235ENST00000638370 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
KCNMA1-235ENST00000638370 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
KCNMA1-235ENST00000638370 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
KCNMA1-235ENST00000638370 HMGXB3Q12766 1538 aa18.52■□□□□ 0.55
KCNMA1-235ENST00000638370 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
KCNMA1-235ENST00000638370 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
KCNMA1-235ENST00000638370 NESP48681 1621 aa18.06■□□□□ 0.48
KCNMA1-235ENST00000638370 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
KCNMA1-235ENST00000638370 CFTRP13569 1480 aa18.03■□□□□ 0.48
KCNMA1-235ENST00000638370 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
KCNMA1-235ENST00000638370 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
KCNMA1-235ENST00000638370 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
KCNMA1-235ENST00000638370 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
KCNMA1-235ENST00000638370 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
KCNMA1-235ENST00000638370 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
KCNMA1-235ENST00000638370 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
KCNMA1-235ENST00000638370 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
KCNMA1-235ENST00000638370 ABCC8Q09428 1581 aa17.77■□□□□ 0.43
KCNMA1-235ENST00000638370 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
KCNMA1-235ENST00000638370 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
KCNMA1-235ENST00000638370 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-235ENST00000638370 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
KCNMA1-235ENST00000638370 CUX1P39880 1505 aa17.66■□□□□ 0.42
KCNMA1-235ENST00000638370 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
KCNMA1-235ENST00000638370 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
KCNMA1-235ENST00000638370 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
KCNMA1-235ENST00000638370 WDR62O43379 1518 aa17.63■□□□□ 0.41
KCNMA1-235ENST00000638370 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
KCNMA1-235ENST00000638370 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
KCNMA1-235ENST00000638370 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
KCNMA1-235ENST00000638370 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
KCNMA1-235ENST00000638370 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
KCNMA1-235ENST00000638370 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
KCNMA1-235ENST00000638370 CUX2O14529 1486 aa17.46■□□□□ 0.39
KCNMA1-235ENST00000638370 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
KCNMA1-235ENST00000638370 SOGA1O94964 1423 aa17.42■□□□□ 0.38
KCNMA1-235ENST00000638370 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-235ENST00000638370 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
KCNMA1-235ENST00000638370 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
KCNMA1-235ENST00000638370 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
KCNMA1-235ENST00000638370 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
KCNMA1-235ENST00000638370 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-235ENST00000638370 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
KCNMA1-235ENST00000638370 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
KCNMA1-235ENST00000638370 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
KCNMA1-235ENST00000638370 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.36
KCNMA1-235ENST00000638370 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
KCNMA1-235ENST00000638370 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
KCNMA1-235ENST00000638370 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
KCNMA1-235ENST00000638370 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
KCNMA1-235ENST00000638370 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
KCNMA1-235ENST00000638370 EEA1Q15075 1411 aa17.16■□□□□ 0.34
KCNMA1-235ENST00000638370 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
KCNMA1-235ENST00000638370 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
KCNMA1-235ENST00000638370 IGF1RP08069 1367 aa17.13■□□□□ 0.33
KCNMA1-235ENST00000638370 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
KCNMA1-235ENST00000638370 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
KCNMA1-235ENST00000638370 CUL7Q14999 1698 aa17.09■□□□□ 0.33
KCNMA1-235ENST00000638370 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-235ENST00000638370 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
KCNMA1-235ENST00000638370 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
KCNMA1-235ENST00000638370 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
KCNMA1-235ENST00000638370 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
KCNMA1-235ENST00000638370 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
KCNMA1-235ENST00000638370 KIF21BO75037 1637 aa17.01■□□□□ 0.31
KCNMA1-235ENST00000638370 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
KCNMA1-235ENST00000638370 CHD1O14646 1710 aa16.99■□□□□ 0.31
KCNMA1-235ENST00000638370 FBLN2P98095 1184 aa16.99■□□□□ 0.31
KCNMA1-235ENST00000638370 GRIN2AQ12879 1464 aa16.97■□□□□ 0.31
KCNMA1-235ENST00000638370 CHMP7Q8WUX9 453 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-235ENST00000638370 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
KCNMA1-235ENST00000638370 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms