RNA–Protein interactions for RNA: ENST00000638366.1

KCNC1-205, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-205ENST00000638366 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
KCNC1-205ENST00000638366 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
KCNC1-205ENST00000638366 ABCC9O60706 1549 aa24.16■■□□□ 1.46
KCNC1-205ENST00000638366 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
KCNC1-205ENST00000638366 NACADO15069 1562 aa22.83■■□□□ 1.25
KCNC1-205ENST00000638366 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
KCNC1-205ENST00000638366 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
KCNC1-205ENST00000638366 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
KCNC1-205ENST00000638366 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
KCNC1-205ENST00000638366 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
KCNC1-205ENST00000638366 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
KCNC1-205ENST00000638366 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
KCNC1-205ENST00000638366 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
KCNC1-205ENST00000638366 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
KCNC1-205ENST00000638366 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
KCNC1-205ENST00000638366 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
KCNC1-205ENST00000638366 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
KCNC1-205ENST00000638366 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
KCNC1-205ENST00000638366 CUX2O14529 1486 aa21.01■□□□□ 0.95
KCNC1-205ENST00000638366 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
KCNC1-205ENST00000638366 SMARCA4P51532 1647 aa20.97■□□□□ 0.95
KCNC1-205ENST00000638366 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
KCNC1-205ENST00000638366 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
KCNC1-205ENST00000638366 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
KCNC1-205ENST00000638366 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
KCNC1-205ENST00000638366 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
KCNC1-205ENST00000638366 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
KCNC1-205ENST00000638366 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
KCNC1-205ENST00000638366 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
KCNC1-205ENST00000638366 NESP48681 1621 aa20.73■□□□□ 0.91
KCNC1-205ENST00000638366 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
KCNC1-205ENST00000638366 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
KCNC1-205ENST00000638366 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
KCNC1-205ENST00000638366 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
KCNC1-205ENST00000638366 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
KCNC1-205ENST00000638366 WIZO95785 1651 aa20.37■□□□□ 0.85
KCNC1-205ENST00000638366 WDR62O43379 1518 aa20.37■□□□□ 0.85
KCNC1-205ENST00000638366 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
KCNC1-205ENST00000638366 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
KCNC1-205ENST00000638366 PRDM2Q13029 1718 aa20.23■□□□□ 0.83
KCNC1-205ENST00000638366 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
KCNC1-205ENST00000638366 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
KCNC1-205ENST00000638366 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
KCNC1-205ENST00000638366 CFTRP13569 1480 aa20.08■□□□□ 0.81
KCNC1-205ENST00000638366 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
KCNC1-205ENST00000638366 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
KCNC1-205ENST00000638366 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
KCNC1-205ENST00000638366 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
KCNC1-205ENST00000638366 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
KCNC1-205ENST00000638366 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
KCNC1-205ENST00000638366 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
KCNC1-205ENST00000638366 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
KCNC1-205ENST00000638366 CHD1O14646 1710 aa19.75■□□□□ 0.75
KCNC1-205ENST00000638366 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
KCNC1-205ENST00000638366 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
KCNC1-205ENST00000638366 DNMBPQ6XZF7 1577 aa19.73■□□□□ 0.75
KCNC1-205ENST00000638366 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
KCNC1-205ENST00000638366 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
KCNC1-205ENST00000638366 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
KCNC1-205ENST00000638366 ARHGEF11O15085 1522 aa19.69■□□□□ 0.74
KCNC1-205ENST00000638366 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
KCNC1-205ENST00000638366 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
KCNC1-205ENST00000638366 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
KCNC1-205ENST00000638366 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
KCNC1-205ENST00000638366 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.7
KCNC1-205ENST00000638366 CLASP1Q7Z460 1538 aa19.43■□□□□ 0.7
KCNC1-205ENST00000638366 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
KCNC1-205ENST00000638366 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
KCNC1-205ENST00000638366 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
KCNC1-205ENST00000638366 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
KCNC1-205ENST00000638366 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
KCNC1-205ENST00000638366 CUX1P39880 1505 aa19.35■□□□□ 0.69
KCNC1-205ENST00000638366 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
KCNC1-205ENST00000638366 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
KCNC1-205ENST00000638366 SOGA1O94964 1423 aa19.28■□□□□ 0.68
KCNC1-205ENST00000638366 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
KCNC1-205ENST00000638366 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
KCNC1-205ENST00000638366 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
KCNC1-205ENST00000638366 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
KCNC1-205ENST00000638366 FBLN2P98095 1184 aa19.19■□□□□ 0.66
KCNC1-205ENST00000638366 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
KCNC1-205ENST00000638366 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
KCNC1-205ENST00000638366 GAPVD1Q14C86 1478 aa19.14■□□□□ 0.65
KCNC1-205ENST00000638366 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
KCNC1-205ENST00000638366 TRHP20396 242 aaPredicted RBP19.09■□□□□ 0.65
KCNC1-205ENST00000638366 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
KCNC1-205ENST00000638366 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
KCNC1-205ENST00000638366 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
KCNC1-205ENST00000638366 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
KCNC1-205ENST00000638366 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
KCNC1-205ENST00000638366 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
KCNC1-205ENST00000638366 KIF13AQ9H1H9 1805 aa19■□□□□ 0.63
KCNC1-205ENST00000638366 NUP160Q12769 1436 aa18.99■□□□□ 0.63
KCNC1-205ENST00000638366 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
KCNC1-205ENST00000638366 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
KCNC1-205ENST00000638366 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
KCNC1-205ENST00000638366 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
KCNC1-205ENST00000638366 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
KCNC1-205ENST00000638366 ADCY10Q96PN6 1610 aa18.74■□□□□ 0.59
KCNC1-205ENST00000638366 DIP2BQ9P265 1576 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms