RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
EFHC1-239ENST00000638140 CCDC180Q9P1Z9 1646 aa26.16■■□□□ 1.78
EFHC1-239ENST00000638140 ABCC9O60706 1549 aa25.88■■□□□ 1.73
EFHC1-239ENST00000638140 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
EFHC1-239ENST00000638140 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
EFHC1-239ENST00000638140 NACADO15069 1562 aa24.71■■□□□ 1.55
EFHC1-239ENST00000638140 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
EFHC1-239ENST00000638140 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
EFHC1-239ENST00000638140 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
EFHC1-239ENST00000638140 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
EFHC1-239ENST00000638140 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
EFHC1-239ENST00000638140 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
EFHC1-239ENST00000638140 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
EFHC1-239ENST00000638140 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
EFHC1-239ENST00000638140 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
EFHC1-239ENST00000638140 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
EFHC1-239ENST00000638140 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
EFHC1-239ENST00000638140 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
EFHC1-239ENST00000638140 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
EFHC1-239ENST00000638140 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
EFHC1-239ENST00000638140 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
EFHC1-239ENST00000638140 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
EFHC1-239ENST00000638140 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
EFHC1-239ENST00000638140 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
EFHC1-239ENST00000638140 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
EFHC1-239ENST00000638140 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
EFHC1-239ENST00000638140 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
EFHC1-239ENST00000638140 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
EFHC1-239ENST00000638140 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
EFHC1-239ENST00000638140 WIZO95785 1651 aa22.51■■□□□ 1.19
EFHC1-239ENST00000638140 NESP48681 1621 aa22.38■■□□□ 1.17
EFHC1-239ENST00000638140 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
EFHC1-239ENST00000638140 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
EFHC1-239ENST00000638140 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
EFHC1-239ENST00000638140 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
EFHC1-239ENST00000638140 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
EFHC1-239ENST00000638140 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
EFHC1-239ENST00000638140 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
EFHC1-239ENST00000638140 CUX2O14529 1486 aa22.04■■□□□ 1.12
EFHC1-239ENST00000638140 CFTRP13569 1480 aa22.03■■□□□ 1.12
EFHC1-239ENST00000638140 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
EFHC1-239ENST00000638140 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
EFHC1-239ENST00000638140 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
EFHC1-239ENST00000638140 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
EFHC1-239ENST00000638140 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
EFHC1-239ENST00000638140 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
EFHC1-239ENST00000638140 WDR62O43379 1518 aa21.76■■□□□ 1.07
EFHC1-239ENST00000638140 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
EFHC1-239ENST00000638140 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
EFHC1-239ENST00000638140 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
EFHC1-239ENST00000638140 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
EFHC1-239ENST00000638140 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
EFHC1-239ENST00000638140 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
EFHC1-239ENST00000638140 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
EFHC1-239ENST00000638140 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
EFHC1-239ENST00000638140 CUX1P39880 1505 aa21.37■■□□□ 1.01
EFHC1-239ENST00000638140 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
EFHC1-239ENST00000638140 SOGA1O94964 1423 aa21.36■■□□□ 1.01
EFHC1-239ENST00000638140 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
EFHC1-239ENST00000638140 AQRO60306 1485 aaKnown RBP eCLIP21.31■■□□□ 1
EFHC1-239ENST00000638140 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
EFHC1-239ENST00000638140 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
EFHC1-239ENST00000638140 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
EFHC1-239ENST00000638140 OSCARQ8IYS5 282 aa21.27■■□□□ 1
EFHC1-239ENST00000638140 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
EFHC1-239ENST00000638140 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
EFHC1-239ENST00000638140 FBLN2P98095 1184 aa21.15■□□□□ 0.98
EFHC1-239ENST00000638140 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
EFHC1-239ENST00000638140 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
EFHC1-239ENST00000638140 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
EFHC1-239ENST00000638140 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
EFHC1-239ENST00000638140 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
EFHC1-239ENST00000638140 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
EFHC1-239ENST00000638140 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
EFHC1-239ENST00000638140 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
EFHC1-239ENST00000638140 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
EFHC1-239ENST00000638140 MAGI1Q96QZ7 1491 aaPredicted RBP20.97■□□□□ 0.95
EFHC1-239ENST00000638140 CHD1O14646 1710 aa20.95■□□□□ 0.94
EFHC1-239ENST00000638140 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
EFHC1-239ENST00000638140 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
EFHC1-239ENST00000638140 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
EFHC1-239ENST00000638140 PBRM1Q86U86 1689 aa20.89■□□□□ 0.94
EFHC1-239ENST00000638140 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
EFHC1-239ENST00000638140 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
EFHC1-239ENST00000638140 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
EFHC1-239ENST00000638140 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
EFHC1-239ENST00000638140 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
EFHC1-239ENST00000638140 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
EFHC1-239ENST00000638140 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
EFHC1-239ENST00000638140 IGF1RP08069 1367 aa20.78■□□□□ 0.92
EFHC1-239ENST00000638140 GRIN2AQ12879 1464 aa20.77■□□□□ 0.92
EFHC1-239ENST00000638140 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
EFHC1-239ENST00000638140 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
EFHC1-239ENST00000638140 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
EFHC1-239ENST00000638140 NUP160Q12769 1436 aa20.68■□□□□ 0.9
EFHC1-239ENST00000638140 CEP170Q5SW79 1584 aa20.65■□□□□ 0.9
EFHC1-239ENST00000638140 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
EFHC1-239ENST00000638140 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
EFHC1-239ENST00000638140 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
EFHC1-239ENST00000638140 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms