RNA–Protein interactions for RNA: ENST00000638106.1

CHRNA7-235, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-235ENST00000638106 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
CHRNA7-235ENST00000638106 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
CHRNA7-235ENST00000638106 ABCC9O60706 1549 aa32.79■■■□□ 2.84
CHRNA7-235ENST00000638106 RB1CC1Q8TDY2 1594 aa31.49■■■□□ 2.63
CHRNA7-235ENST00000638106 NACADO15069 1562 aa31.38■■■□□ 2.61
CHRNA7-235ENST00000638106 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
CHRNA7-235ENST00000638106 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
CHRNA7-235ENST00000638106 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
CHRNA7-235ENST00000638106 DCAF1Q9Y4B6 1507 aa30.81■■■□□ 2.52
CHRNA7-235ENST00000638106 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
CHRNA7-235ENST00000638106 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
CHRNA7-235ENST00000638106 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
CHRNA7-235ENST00000638106 DNAJC5BQ9UF47 199 aa30.36■■■□□ 2.45
CHRNA7-235ENST00000638106 SCRIBQ14160 1630 aa30.26■■■□□ 2.44
CHRNA7-235ENST00000638106 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
CHRNA7-235ENST00000638106 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
CHRNA7-235ENST00000638106 CC2D2AQ9P2K1 1620 aa29.7■■■□□ 2.34
CHRNA7-235ENST00000638106 CECR2Q9BXF3 1484 aa29.54■■■□□ 2.32
CHRNA7-235ENST00000638106 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
CHRNA7-235ENST00000638106 NCAPD3P42695 1498 aa28.91■■■□□ 2.22
CHRNA7-235ENST00000638106 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
CHRNA7-235ENST00000638106 SMARCA2P51531 1590 aa28.86■■■□□ 2.21
CHRNA7-235ENST00000638106 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
CHRNA7-235ENST00000638106 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
CHRNA7-235ENST00000638106 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.18
CHRNA7-235ENST00000638106 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
CHRNA7-235ENST00000638106 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
CHRNA7-235ENST00000638106 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
CHRNA7-235ENST00000638106 WIZO95785 1651 aa28.32■■■□□ 2.12
CHRNA7-235ENST00000638106 NESP48681 1621 aa28.26■■■□□ 2.11
CHRNA7-235ENST00000638106 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
CHRNA7-235ENST00000638106 CUX2O14529 1486 aa28.21■■■□□ 2.11
CHRNA7-235ENST00000638106 RSF1Q96T23 1441 aaPredicted RBP28.18■■■□□ 2.1
CHRNA7-235ENST00000638106 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
CHRNA7-235ENST00000638106 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
CHRNA7-235ENST00000638106 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
CHRNA7-235ENST00000638106 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
CHRNA7-235ENST00000638106 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
CHRNA7-235ENST00000638106 CFTRP13569 1480 aa27.81■■■□□ 2.04
CHRNA7-235ENST00000638106 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.03
CHRNA7-235ENST00000638106 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
CHRNA7-235ENST00000638106 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
CHRNA7-235ENST00000638106 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.02
CHRNA7-235ENST00000638106 WDR62O43379 1518 aa27.69■■■□□ 2.02
CHRNA7-235ENST00000638106 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
CHRNA7-235ENST00000638106 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
CHRNA7-235ENST00000638106 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
CHRNA7-235ENST00000638106 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
CHRNA7-235ENST00000638106 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
CHRNA7-235ENST00000638106 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
CHRNA7-235ENST00000638106 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
CHRNA7-235ENST00000638106 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
CHRNA7-235ENST00000638106 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
CHRNA7-235ENST00000638106 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
CHRNA7-235ENST00000638106 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
CHRNA7-235ENST00000638106 OSCARQ8IYS5 282 aa26.95■■□□□ 1.9
CHRNA7-235ENST00000638106 EIF4G3O43432 1585 aaKnown RBP26.95■■□□□ 1.9
CHRNA7-235ENST00000638106 CUX1P39880 1505 aa26.88■■□□□ 1.89
CHRNA7-235ENST00000638106 SOGA1O94964 1423 aa26.86■■□□□ 1.89
CHRNA7-235ENST00000638106 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
CHRNA7-235ENST00000638106 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
CHRNA7-235ENST00000638106 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.88
CHRNA7-235ENST00000638106 RAD54L2Q9Y4B4 1467 aa26.82■■□□□ 1.88
CHRNA7-235ENST00000638106 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
CHRNA7-235ENST00000638106 CHD1O14646 1710 aa26.7■■□□□ 1.87
CHRNA7-235ENST00000638106 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
CHRNA7-235ENST00000638106 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
CHRNA7-235ENST00000638106 ABCA10Q8WWZ4 1543 aa26.61■■□□□ 1.85
CHRNA7-235ENST00000638106 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
CHRNA7-235ENST00000638106 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.85
CHRNA7-235ENST00000638106 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
CHRNA7-235ENST00000638106 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
CHRNA7-235ENST00000638106 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
CHRNA7-235ENST00000638106 FBLN2P98095 1184 aa26.58■■□□□ 1.85
CHRNA7-235ENST00000638106 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
CHRNA7-235ENST00000638106 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
CHRNA7-235ENST00000638106 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
CHRNA7-235ENST00000638106 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
CHRNA7-235ENST00000638106 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
CHRNA7-235ENST00000638106 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
CHRNA7-235ENST00000638106 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
CHRNA7-235ENST00000638106 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
CHRNA7-235ENST00000638106 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
CHRNA7-235ENST00000638106 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
CHRNA7-235ENST00000638106 CLASP1Q7Z460 1538 aa26.38■■□□□ 1.81
CHRNA7-235ENST00000638106 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
CHRNA7-235ENST00000638106 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
CHRNA7-235ENST00000638106 GRIN2AQ12879 1464 aa26.25■■□□□ 1.79
CHRNA7-235ENST00000638106 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
CHRNA7-235ENST00000638106 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
CHRNA7-235ENST00000638106 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
CHRNA7-235ENST00000638106 NUP160Q12769 1436 aa26.15■■□□□ 1.78
CHRNA7-235ENST00000638106 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
CHRNA7-235ENST00000638106 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
CHRNA7-235ENST00000638106 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
CHRNA7-235ENST00000638106 CUL7Q14999 1698 aa26.03■■□□□ 1.76
CHRNA7-235ENST00000638106 IGF1RP08069 1367 aa25.98■■□□□ 1.75
CHRNA7-235ENST00000638106 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
CHRNA7-235ENST00000638106 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
CHRNA7-235ENST00000638106 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms