RNA–Protein interactions for RNA: ENST00000638081.1

CHRNA7-234, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 692 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-234ENST00000638081 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
CHRNA7-234ENST00000638081 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
CHRNA7-234ENST00000638081 ABCC9O60706 1549 aa37.2■■■■□ 3.55
CHRNA7-234ENST00000638081 RB1CC1Q8TDY2 1594 aa35.41■■■■□ 3.26
CHRNA7-234ENST00000638081 NACADO15069 1562 aa35.2■■■■□ 3.23
CHRNA7-234ENST00000638081 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
CHRNA7-234ENST00000638081 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
CHRNA7-234ENST00000638081 MYO15BQ96JP2 1530 aa34.75■■■■□ 3.15
CHRNA7-234ENST00000638081 PABPN1Q86U42 306 aaKnown RBP eCLIP34.68■■■■□ 3.14
CHRNA7-234ENST00000638081 UNC13AQ9UPW8 1703 aa34.55■■■■□ 3.12
CHRNA7-234ENST00000638081 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
CHRNA7-234ENST00000638081 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
CHRNA7-234ENST00000638081 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
CHRNA7-234ENST00000638081 SCRIBQ14160 1630 aa33.97■■■■□ 3.03
CHRNA7-234ENST00000638081 SHROOM4Q9ULL8 1493 aa33.93■■■■□ 3.02
CHRNA7-234ENST00000638081 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
CHRNA7-234ENST00000638081 EIF4G1Q04637 1599 aaKnown RBP33.54■■■□□ 2.96
CHRNA7-234ENST00000638081 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
CHRNA7-234ENST00000638081 NCAPD3P42695 1498 aa32.52■■■□□ 2.8
CHRNA7-234ENST00000638081 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
CHRNA7-234ENST00000638081 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
CHRNA7-234ENST00000638081 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
CHRNA7-234ENST00000638081 HMGXB3Q12766 1538 aa32.26■■■□□ 2.76
CHRNA7-234ENST00000638081 BAZ1AQ9NRL2 1556 aaPredicted RBP32.26■■■□□ 2.75
CHRNA7-234ENST00000638081 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
CHRNA7-234ENST00000638081 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
CHRNA7-234ENST00000638081 PEG3Q9GZU2 1588 aa32.09■■■□□ 2.73
CHRNA7-234ENST00000638081 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
CHRNA7-234ENST00000638081 CUX2O14529 1486 aa32■■■□□ 2.71
CHRNA7-234ENST00000638081 NESP48681 1621 aa31.99■■■□□ 2.71
CHRNA7-234ENST00000638081 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
CHRNA7-234ENST00000638081 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
CHRNA7-234ENST00000638081 WIZO95785 1651 aa31.64■■■□□ 2.66
CHRNA7-234ENST00000638081 THOC2Q8NI27 1593 aaKnown RBP31.61■■■□□ 2.65
CHRNA7-234ENST00000638081 PDS5BQ9NTI5 1447 aa31.58■■■□□ 2.65
CHRNA7-234ENST00000638081 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
CHRNA7-234ENST00000638081 KIF21AQ7Z4S6 1674 aa31.52■■■□□ 2.64
CHRNA7-234ENST00000638081 RSF1Q96T23 1441 aaPredicted RBP31.44■■■□□ 2.62
CHRNA7-234ENST00000638081 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
CHRNA7-234ENST00000638081 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
CHRNA7-234ENST00000638081 WDR62O43379 1518 aa31.22■■■□□ 2.59
CHRNA7-234ENST00000638081 CFTRP13569 1480 aa31.2■■■□□ 2.58
CHRNA7-234ENST00000638081 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.58
CHRNA7-234ENST00000638081 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
CHRNA7-234ENST00000638081 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
CHRNA7-234ENST00000638081 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
CHRNA7-234ENST00000638081 PRDM2Q13029 1718 aa30.79■■■□□ 2.52
CHRNA7-234ENST00000638081 TOPBP1Q92547 1522 aa30.6■■■□□ 2.49
CHRNA7-234ENST00000638081 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
CHRNA7-234ENST00000638081 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
CHRNA7-234ENST00000638081 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
CHRNA7-234ENST00000638081 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
CHRNA7-234ENST00000638081 ABCC8Q09428 1581 aa30.51■■■□□ 2.47
CHRNA7-234ENST00000638081 DNMBPQ6XZF7 1577 aa30.48■■■□□ 2.47
CHRNA7-234ENST00000638081 EIF4G3O43432 1585 aaKnown RBP30.33■■■□□ 2.45
CHRNA7-234ENST00000638081 TARBP1Q13395 1621 aaKnown RBP30.3■■■□□ 2.44
CHRNA7-234ENST00000638081 POLA1P09884 1462 aaPredicted RBP30.3■■■□□ 2.44
CHRNA7-234ENST00000638081 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
CHRNA7-234ENST00000638081 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
CHRNA7-234ENST00000638081 SOGA1O94964 1423 aa30.16■■■□□ 2.42
CHRNA7-234ENST00000638081 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.41
CHRNA7-234ENST00000638081 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.41
CHRNA7-234ENST00000638081 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.41
CHRNA7-234ENST00000638081 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
CHRNA7-234ENST00000638081 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
CHRNA7-234ENST00000638081 CUX1P39880 1505 aa30.12■■■□□ 2.41
CHRNA7-234ENST00000638081 TDRD9Q8NDG6 1382 aaKnown RBP30.11■■■□□ 2.41
CHRNA7-234ENST00000638081 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
CHRNA7-234ENST00000638081 FBLN2P98095 1184 aa30.06■■■□□ 2.4
CHRNA7-234ENST00000638081 CHD1O14646 1710 aa30.05■■■□□ 2.4
CHRNA7-234ENST00000638081 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
CHRNA7-234ENST00000638081 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
CHRNA7-234ENST00000638081 GRIN2BQ13224 1484 aa29.88■■■□□ 2.37
CHRNA7-234ENST00000638081 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
CHRNA7-234ENST00000638081 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
CHRNA7-234ENST00000638081 CHMP7Q8WUX9 453 aaPredicted RBP29.84■■■□□ 2.37
CHRNA7-234ENST00000638081 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
CHRNA7-234ENST00000638081 GAPVD1Q14C86 1478 aa29.79■■■□□ 2.36
CHRNA7-234ENST00000638081 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
CHRNA7-234ENST00000638081 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
CHRNA7-234ENST00000638081 CLASP1Q7Z460 1538 aa29.76■■■□□ 2.36
CHRNA7-234ENST00000638081 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
CHRNA7-234ENST00000638081 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
CHRNA7-234ENST00000638081 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
CHRNA7-234ENST00000638081 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.34
CHRNA7-234ENST00000638081 TOP2BQ02880 1626 aa29.63■■■□□ 2.33
CHRNA7-234ENST00000638081 BIVM-ERCC5R4GMW8 1640 aa29.61■■■□□ 2.33
CHRNA7-234ENST00000638081 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
CHRNA7-234ENST00000638081 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
CHRNA7-234ENST00000638081 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
CHRNA7-234ENST00000638081 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
CHRNA7-234ENST00000638081 NUP160Q12769 1436 aa29.41■■■□□ 2.3
CHRNA7-234ENST00000638081 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
CHRNA7-234ENST00000638081 CEP170Q5SW79 1584 aa29.39■■■□□ 2.29
CHRNA7-234ENST00000638081 ERCC6L2Q5T890 1561 aa29.32■■■□□ 2.28
CHRNA7-234ENST00000638081 SHROOM2Q13796 1616 aa29.23■■■□□ 2.27
CHRNA7-234ENST00000638081 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
CHRNA7-234ENST00000638081 JPH4Q96JJ6 628 aa29.11■■■□□ 2.25
CHRNA7-234ENST00000638081 IGF1RP08069 1367 aa29.08■■■□□ 2.25
CHRNA7-234ENST00000638081 KIF27Q86VH2 1401 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms