RNA–Protein interactions for RNA: ENST00000638075.1

EFHC1-238, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-238ENST00000638075 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
EFHC1-238ENST00000638075 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
EFHC1-238ENST00000638075 ABCC9O60706 1549 aa22.31■■□□□ 1.16
EFHC1-238ENST00000638075 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
EFHC1-238ENST00000638075 NACADO15069 1562 aa21.24■□□□□ 0.99
EFHC1-238ENST00000638075 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
EFHC1-238ENST00000638075 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
EFHC1-238ENST00000638075 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
EFHC1-238ENST00000638075 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
EFHC1-238ENST00000638075 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
EFHC1-238ENST00000638075 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
EFHC1-238ENST00000638075 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
EFHC1-238ENST00000638075 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
EFHC1-238ENST00000638075 SCRIBQ14160 1630 aa20.48■□□□□ 0.87
EFHC1-238ENST00000638075 SHROOM4Q9ULL8 1493 aa20.44■□□□□ 0.86
EFHC1-238ENST00000638075 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
EFHC1-238ENST00000638075 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
EFHC1-238ENST00000638075 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
EFHC1-238ENST00000638075 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
EFHC1-238ENST00000638075 ATAD2BQ9ULI0 1458 aa19.59■□□□□ 0.73
EFHC1-238ENST00000638075 SMARCA4P51532 1647 aa19.58■□□□□ 0.73
EFHC1-238ENST00000638075 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
EFHC1-238ENST00000638075 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
EFHC1-238ENST00000638075 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
EFHC1-238ENST00000638075 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
EFHC1-238ENST00000638075 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
EFHC1-238ENST00000638075 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
EFHC1-238ENST00000638075 NESP48681 1621 aa19.23■□□□□ 0.67
EFHC1-238ENST00000638075 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
EFHC1-238ENST00000638075 WIZO95785 1651 aa19.17■□□□□ 0.66
EFHC1-238ENST00000638075 CUX2O14529 1486 aa19.16■□□□□ 0.66
EFHC1-238ENST00000638075 LAMC3Q9Y6N6 1575 aa19.13■□□□□ 0.65
EFHC1-238ENST00000638075 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
EFHC1-238ENST00000638075 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
EFHC1-238ENST00000638075 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
EFHC1-238ENST00000638075 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
EFHC1-238ENST00000638075 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
EFHC1-238ENST00000638075 KIF21AQ7Z4S6 1674 aa18.96■□□□□ 0.63
EFHC1-238ENST00000638075 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
EFHC1-238ENST00000638075 CFTRP13569 1480 aa18.86■□□□□ 0.61
EFHC1-238ENST00000638075 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
EFHC1-238ENST00000638075 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
EFHC1-238ENST00000638075 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
EFHC1-238ENST00000638075 WDR62O43379 1518 aa18.77■□□□□ 0.6
EFHC1-238ENST00000638075 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
EFHC1-238ENST00000638075 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
EFHC1-238ENST00000638075 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
EFHC1-238ENST00000638075 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
EFHC1-238ENST00000638075 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
EFHC1-238ENST00000638075 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
EFHC1-238ENST00000638075 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
EFHC1-238ENST00000638075 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
EFHC1-238ENST00000638075 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
EFHC1-238ENST00000638075 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
EFHC1-238ENST00000638075 TARBP1Q13395 1621 aaKnown RBP18.3■□□□□ 0.52
EFHC1-238ENST00000638075 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
EFHC1-238ENST00000638075 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
EFHC1-238ENST00000638075 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
EFHC1-238ENST00000638075 SOGA1O94964 1423 aa18.23■□□□□ 0.51
EFHC1-238ENST00000638075 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
EFHC1-238ENST00000638075 CUX1P39880 1505 aa18.22■□□□□ 0.51
EFHC1-238ENST00000638075 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
EFHC1-238ENST00000638075 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
EFHC1-238ENST00000638075 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
EFHC1-238ENST00000638075 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
EFHC1-238ENST00000638075 CHD1O14646 1710 aa18.08■□□□□ 0.48
EFHC1-238ENST00000638075 FBLN2P98095 1184 aa18.07■□□□□ 0.48
EFHC1-238ENST00000638075 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
EFHC1-238ENST00000638075 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
EFHC1-238ENST00000638075 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
EFHC1-238ENST00000638075 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
EFHC1-238ENST00000638075 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
EFHC1-238ENST00000638075 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.47
EFHC1-238ENST00000638075 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
EFHC1-238ENST00000638075 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
EFHC1-238ENST00000638075 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
EFHC1-238ENST00000638075 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
EFHC1-238ENST00000638075 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
EFHC1-238ENST00000638075 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
EFHC1-238ENST00000638075 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
EFHC1-238ENST00000638075 ABCA5Q8WWZ7 1642 aa17.95■□□□□ 0.46
EFHC1-238ENST00000638075 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
EFHC1-238ENST00000638075 SYNJ2O15056 1496 aa17.95■□□□□ 0.46
EFHC1-238ENST00000638075 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
EFHC1-238ENST00000638075 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
EFHC1-238ENST00000638075 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
EFHC1-238ENST00000638075 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
EFHC1-238ENST00000638075 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
EFHC1-238ENST00000638075 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
EFHC1-238ENST00000638075 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
EFHC1-238ENST00000638075 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
EFHC1-238ENST00000638075 NUP160Q12769 1436 aa17.74■□□□□ 0.43
EFHC1-238ENST00000638075 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
EFHC1-238ENST00000638075 IGF1RP08069 1367 aa17.66■□□□□ 0.42
EFHC1-238ENST00000638075 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
EFHC1-238ENST00000638075 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
EFHC1-238ENST00000638075 SHROOM2Q13796 1616 aa17.63■□□□□ 0.41
EFHC1-238ENST00000638075 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
EFHC1-238ENST00000638075 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
EFHC1-238ENST00000638075 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms