RNA–Protein interactions for RNA: ENST00000638022.1

KCNT1-226, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 5

Gene KCNT1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-226ENST00000638022 NISCHQ9Y2I1 1504 aa56.61■■■■■ 6.65
KCNT1-226ENST00000638022 CCDC180Q9P1Z9 1646 aa50.5■■■■■ 5.67
KCNT1-226ENST00000638022 ABCC9O60706 1549 aa50.04■■■■■ 5.6
KCNT1-226ENST00000638022 RB1CC1Q8TDY2 1594 aa47.83■■■■■ 5.25
KCNT1-226ENST00000638022 DCAF8L2P0C7V8 631 aa47.71■■■■■ 5.23
KCNT1-226ENST00000638022 NACADO15069 1562 aa47.62■■■■■ 5.21
KCNT1-226ENST00000638022 MYO15BQ96JP2 1530 aa47.11■■■■■ 5.13
KCNT1-226ENST00000638022 ZCCHC6Q5VYS8 1495 aaKnown RBP47.02■■■■■ 5.12
KCNT1-226ENST00000638022 UNC13AQ9UPW8 1703 aa46.74■■■■■ 5.07
KCNT1-226ENST00000638022 PABPN1Q86U42 306 aaKnown RBP eCLIP46.74■■■■■ 5.07
KCNT1-226ENST00000638022 DCAF1Q9Y4B6 1507 aa46.74■■■■■ 5.07
KCNT1-226ENST00000638022 DNAJC5BQ9UF47 199 aa46.43■■■■■ 5.02
KCNT1-226ENST00000638022 BICRAQ9NZM4 1560 aa46.39■■■■■ 5.02
KCNT1-226ENST00000638022 SCRIBQ14160 1630 aa46.14■■■■■ 4.98
KCNT1-226ENST00000638022 SHROOM4Q9ULL8 1493 aa45.77■■■■■ 4.92
KCNT1-226ENST00000638022 EIF4G1Q04637 1599 aaKnown RBP45.23■■■■■ 4.83
KCNT1-226ENST00000638022 CC2D2AQ9P2K1 1620 aa45.19■■■■■ 4.83
KCNT1-226ENST00000638022 CECR2Q9BXF3 1484 aa44.99■■■■■ 4.79
KCNT1-226ENST00000638022 SMARCA4P51532 1647 aa44.03■■■■■ 4.64
KCNT1-226ENST00000638022 NCAPD3P42695 1498 aa43.96■■■■■ 4.63
KCNT1-226ENST00000638022 ATAD2BQ9ULI0 1458 aa43.94■■■■■ 4.62
KCNT1-226ENST00000638022 BAZ1AQ9NRL2 1556 aaPredicted RBP43.9■■■■■ 4.62
KCNT1-226ENST00000638022 SMARCA2P51531 1590 aa43.83■■■■■ 4.61
KCNT1-226ENST00000638022 HMGXB3Q12766 1538 aa43.67■■■■■ 4.58
KCNT1-226ENST00000638022 MROH2BQ7Z745 1585 aa43.65■■■■■ 4.58
KCNT1-226ENST00000638022 BAZ1BQ9UIG0 1483 aaKnown RBP43.57■■■■■ 4.56
KCNT1-226ENST00000638022 PEG3Q9GZU2 1588 aa43.55■■■■■ 4.56
KCNT1-226ENST00000638022 WIZO95785 1651 aa43.17■■■■■ 4.5
KCNT1-226ENST00000638022 ERCC6Q03468 1493 aa43.16■■■■■ 4.5
KCNT1-226ENST00000638022 NESP48681 1621 aa43.15■■■■■ 4.5
KCNT1-226ENST00000638022 RSF1Q96T23 1441 aaPredicted RBP42.97■■■■■ 4.47
KCNT1-226ENST00000638022 LAMC3Q9Y6N6 1575 aa42.88■■■■■ 4.45
KCNT1-226ENST00000638022 CUX2O14529 1486 aa42.81■■■■■ 4.44
KCNT1-226ENST00000638022 CADPSQ9ULU8 1353 aa42.69■■■■■ 4.42
KCNT1-226ENST00000638022 PDS5BQ9NTI5 1447 aa42.65■■■■■ 4.42
KCNT1-226ENST00000638022 TOP2AP11388 1531 aaKnown RBP42.62■■■■■ 4.41
KCNT1-226ENST00000638022 KIF21AQ7Z4S6 1674 aa42.58■■■■■ 4.41
KCNT1-226ENST00000638022 THOC2Q8NI27 1593 aaKnown RBP42.52■■■■■ 4.4
KCNT1-226ENST00000638022 CFTRP13569 1480 aa42.3■■■■■ 4.36
KCNT1-226ENST00000638022 MRC2Q9UBG0 1479 aa42.23■■■■■ 4.35
KCNT1-226ENST00000638022 FANCD2Q9BXW9 1451 aa42.21■■■■■ 4.35
KCNT1-226ENST00000638022 CEP164Q9UPV0 1460 aa42.19■■■■■ 4.34
KCNT1-226ENST00000638022 DNAJC5Q9H3Z4 198 aa42.19■■■■■ 4.34
KCNT1-226ENST00000638022 CCDC88BA6NC98 1476 aa42.17■■■■■ 4.34
KCNT1-226ENST00000638022 WDR62O43379 1518 aa42.09■■■■■ 4.33
KCNT1-226ENST00000638022 PRDM2Q13029 1718 aa41.9■■■■■ 4.3
KCNT1-226ENST00000638022 URB2Q14146 1524 aaKnown RBP41.82■■■■■ 4.29
KCNT1-226ENST00000638022 SUPT5HO00267 1087 aaKnown RBP41.62■■■■■ 4.25
KCNT1-226ENST00000638022 TOPBP1Q92547 1522 aa41.47■■■■■ 4.23
KCNT1-226ENST00000638022 ABCC8Q09428 1581 aa41.41■■■■■ 4.22
KCNT1-226ENST00000638022 DNMBPQ6XZF7 1577 aa41.36■■■■■ 4.21
KCNT1-226ENST00000638022 IFT140Q96RY7 1462 aa41.33■■■■■ 4.21
KCNT1-226ENST00000638022 ZNF608Q9ULD9 1512 aaPredicted RBP41.23■■■■■ 4.19
KCNT1-226ENST00000638022 POLA1P09884 1462 aaPredicted RBP41.08■■■■■ 4.17
KCNT1-226ENST00000638022 OSCARQ8IYS5 282 aa41.05■■■■■ 4.16
KCNT1-226ENST00000638022 TARBP1Q13395 1621 aaKnown RBP41.03■■■■■ 4.16
KCNT1-226ENST00000638022 EIF4G3O43432 1585 aaKnown RBP40.99■■■■■ 4.15
KCNT1-226ENST00000638022 CUX1P39880 1505 aa40.97■■■■■ 4.15
KCNT1-226ENST00000638022 RAD54L2Q9Y4B4 1467 aa40.96■■■■■ 4.15
KCNT1-226ENST00000638022 AQRO60306 1485 aaKnown RBP eCLIP40.95■■■■■ 4.15
KCNT1-226ENST00000638022 SOGA1O94964 1423 aa40.94■■■■■ 4.14
KCNT1-226ENST00000638022 FGD5Q6ZNL6 1462 aa40.92■■■■■ 4.14
KCNT1-226ENST00000638022 TDRD9Q8NDG6 1382 aaKnown RBP40.8■■■■■ 4.12
KCNT1-226ENST00000638022 TRIM41Q8WV44 630 aa40.67■■■■■ 4.1
KCNT1-226ENST00000638022 FBLN2P98095 1184 aa40.63■■■■■ 4.09
KCNT1-226ENST00000638022 WDR97A6NE52 1622 aa40.62■■■■■ 4.09
KCNT1-226ENST00000638022 CHD1O14646 1710 aa40.6■■■■■ 4.09
KCNT1-226ENST00000638022 SNAPC4Q5SXM2 1469 aa40.52■■■■■ 4.08
KCNT1-226ENST00000638022 WRNQ14191 1432 aaPredicted RBP eCLIP40.52■■■■■ 4.08
KCNT1-226ENST00000638022 GRIN2BQ13224 1484 aa40.49■■■■■ 4.07
KCNT1-226ENST00000638022 ABCA10Q8WWZ4 1543 aa40.47■■■■■ 4.07
KCNT1-226ENST00000638022 TOP2BQ02880 1626 aa40.45■■■■■ 4.07
KCNT1-226ENST00000638022 SYNJ1O43426 1573 aa40.45■■■■■ 4.07
KCNT1-226ENST00000638022 BIVM-ERCC5R4GMW8 1640 aa40.45■■■■■ 4.07
KCNT1-226ENST00000638022 GAPVD1Q14C86 1478 aa40.44■■■■■ 4.06
KCNT1-226ENST00000638022 MAGI1Q96QZ7 1491 aaPredicted RBP40.41■■■■■ 4.06
KCNT1-226ENST00000638022 CHMP7Q8WUX9 453 aaPredicted RBP40.4■■■■■ 4.06
KCNT1-226ENST00000638022 RIMBP3CA6NJZ7 1639 aa40.4■■■■■ 4.06
KCNT1-226ENST00000638022 RIMBP3BA6NNM3 1639 aa40.4■■■■■ 4.06
KCNT1-226ENST00000638022 RIMBP3Q9UFD9 1639 aa40.4■■■■■ 4.06
KCNT1-226ENST00000638022 PBRM1Q86U86 1689 aa40.36■■■■■ 4.05
KCNT1-226ENST00000638022 ABCA5Q8WWZ7 1642 aa40.34■■■■■ 4.05
KCNT1-226ENST00000638022 ARHGEF11O15085 1522 aa40.32■■■■■ 4.05
KCNT1-226ENST00000638022 SYNJ2O15056 1496 aa40.28■■■■■ 4.04
KCNT1-226ENST00000638022 CLASP1Q7Z460 1538 aa40.11■■■■■ 4.01
KCNT1-226ENST00000638022 CYB5RLQ6IPT4 315 aa40.08■■■■■ 4.01
KCNT1-226ENST00000638022 ADAMTS12P58397 1594 aa40.01■■■■□ 3.99
KCNT1-226ENST00000638022 ARAP1Q96P48 1450 aa39.97■■■■□ 3.99
KCNT1-226ENST00000638022 ERICH3Q5RHP9 1530 aa39.96■■■■□ 3.99
KCNT1-226ENST00000638022 GRIN2AQ12879 1464 aa39.96■■■■□ 3.99
KCNT1-226ENST00000638022 FHAD1B1AJZ9 1412 aa39.94■■■■□ 3.98
KCNT1-226ENST00000638022 NUP160Q12769 1436 aa39.79■■■■□ 3.96
KCNT1-226ENST00000638022 CEP170Q5SW79 1584 aa39.79■■■■□ 3.96
KCNT1-226ENST00000638022 KIF27Q86VH2 1401 aa39.72■■■■□ 3.95
KCNT1-226ENST00000638022 IGF1RP08069 1367 aa39.64■■■■□ 3.94
KCNT1-226ENST00000638022 ERCC6L2Q5T890 1561 aa39.58■■■■□ 3.93
KCNT1-226ENST00000638022 SHROOM2Q13796 1616 aa39.53■■■■□ 3.92
KCNT1-226ENST00000638022 CUL7Q14999 1698 aa39.5■■■■□ 3.91
KCNT1-226ENST00000638022 TRHP20396 242 aaPredicted RBP39.48■■■■□ 3.91
KCNT1-226ENST00000638022 JPH4Q96JJ6 628 aa39.46■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms