RNA–Protein interactions for RNA: ENST00000637971.1

CHRNA7-232, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,335 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-232ENST00000637971 NISCHQ9Y2I1 1504 aa49.82■■■■■ 5.57
CHRNA7-232ENST00000637971 CCDC180Q9P1Z9 1646 aa44.7■■■■■ 4.75
CHRNA7-232ENST00000637971 ABCC9O60706 1549 aa44.5■■■■■ 4.71
CHRNA7-232ENST00000637971 RB1CC1Q8TDY2 1594 aa42.4■■■■■ 4.38
CHRNA7-232ENST00000637971 NACADO15069 1562 aa42.13■■■■■ 4.33
CHRNA7-232ENST00000637971 DCAF8L2P0C7V8 631 aa41.94■■■■■ 4.3
CHRNA7-232ENST00000637971 UNC13AQ9UPW8 1703 aa41.65■■■■■ 4.26
CHRNA7-232ENST00000637971 MYO15BQ96JP2 1530 aa41.53■■■■■ 4.24
CHRNA7-232ENST00000637971 DNAJC5BQ9UF47 199 aa41.5■■■■■ 4.23
CHRNA7-232ENST00000637971 PABPN1Q86U42 306 aaKnown RBP eCLIP41.42■■■■■ 4.22
CHRNA7-232ENST00000637971 ZCCHC6Q5VYS8 1495 aaKnown RBP41.36■■■■■ 4.21
CHRNA7-232ENST00000637971 BICRAQ9NZM4 1560 aa41.22■■■■■ 4.19
CHRNA7-232ENST00000637971 DCAF1Q9Y4B6 1507 aa41.1■■■■■ 4.17
CHRNA7-232ENST00000637971 SCRIBQ14160 1630 aa40.81■■■■■ 4.12
CHRNA7-232ENST00000637971 SHROOM4Q9ULL8 1493 aa40.53■■■■■ 4.08
CHRNA7-232ENST00000637971 CC2D2AQ9P2K1 1620 aa40.23■■■■■ 4.03
CHRNA7-232ENST00000637971 EIF4G1Q04637 1599 aaKnown RBP40.16■■■■■ 4.02
CHRNA7-232ENST00000637971 CECR2Q9BXF3 1484 aa40.02■■■■■ 4
CHRNA7-232ENST00000637971 SMARCA4P51532 1647 aa38.9■■■■□ 3.82
CHRNA7-232ENST00000637971 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
CHRNA7-232ENST00000637971 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
CHRNA7-232ENST00000637971 SMARCA2P51531 1590 aa38.72■■■■□ 3.79
CHRNA7-232ENST00000637971 BAZ1AQ9NRL2 1556 aaPredicted RBP38.66■■■■□ 3.78
CHRNA7-232ENST00000637971 HMGXB3Q12766 1538 aa38.64■■■■□ 3.78
CHRNA7-232ENST00000637971 BAZ1BQ9UIG0 1483 aaKnown RBP38.46■■■■□ 3.75
CHRNA7-232ENST00000637971 MROH2BQ7Z745 1585 aa38.44■■■■□ 3.74
CHRNA7-232ENST00000637971 PEG3Q9GZU2 1588 aa38.44■■■■□ 3.74
CHRNA7-232ENST00000637971 ERCC6Q03468 1493 aa38.38■■■■□ 3.73
CHRNA7-232ENST00000637971 NESP48681 1621 aa38.31■■■■□ 3.72
CHRNA7-232ENST00000637971 CUX2O14529 1486 aa38.19■■■■□ 3.7
CHRNA7-232ENST00000637971 WIZO95785 1651 aa38.06■■■■□ 3.68
CHRNA7-232ENST00000637971 LAMC3Q9Y6N6 1575 aa38.01■■■■□ 3.67
CHRNA7-232ENST00000637971 KIF21AQ7Z4S6 1674 aa37.92■■■■□ 3.66
CHRNA7-232ENST00000637971 THOC2Q8NI27 1593 aaKnown RBP37.91■■■■□ 3.66
CHRNA7-232ENST00000637971 DNAJC5Q9H3Z4 198 aa37.88■■■■□ 3.66
CHRNA7-232ENST00000637971 PDS5BQ9NTI5 1447 aa37.7■■■■□ 3.63
CHRNA7-232ENST00000637971 CADPSQ9ULU8 1353 aa37.65■■■■□ 3.62
CHRNA7-232ENST00000637971 RSF1Q96T23 1441 aaPredicted RBP37.65■■■■□ 3.62
CHRNA7-232ENST00000637971 TOP2AP11388 1531 aaKnown RBP37.52■■■■□ 3.6
CHRNA7-232ENST00000637971 MRC2Q9UBG0 1479 aa37.45■■■■□ 3.59
CHRNA7-232ENST00000637971 WDR62O43379 1518 aa37.37■■■■□ 3.57
CHRNA7-232ENST00000637971 CEP164Q9UPV0 1460 aa37.34■■■■□ 3.57
CHRNA7-232ENST00000637971 CFTRP13569 1480 aa37.31■■■■□ 3.56
CHRNA7-232ENST00000637971 FANCD2Q9BXW9 1451 aa37.31■■■■□ 3.56
CHRNA7-232ENST00000637971 PRDM2Q13029 1718 aa37.17■■■■□ 3.54
CHRNA7-232ENST00000637971 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
CHRNA7-232ENST00000637971 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
CHRNA7-232ENST00000637971 TOPBP1Q92547 1522 aa36.65■■■■□ 3.46
CHRNA7-232ENST00000637971 ZNF608Q9ULD9 1512 aaPredicted RBP36.55■■■■□ 3.44
CHRNA7-232ENST00000637971 DNMBPQ6XZF7 1577 aa36.54■■■■□ 3.44
CHRNA7-232ENST00000637971 IFT140Q96RY7 1462 aa36.54■■■■□ 3.44
CHRNA7-232ENST00000637971 ABCC8Q09428 1581 aa36.47■■■■□ 3.43
CHRNA7-232ENST00000637971 TRIM41Q8WV44 630 aa36.42■■■■□ 3.42
CHRNA7-232ENST00000637971 EIF4G3O43432 1585 aaKnown RBP36.42■■■■□ 3.42
CHRNA7-232ENST00000637971 OSCARQ8IYS5 282 aa36.4■■■■□ 3.42
CHRNA7-232ENST00000637971 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
CHRNA7-232ENST00000637971 POLA1P09884 1462 aaPredicted RBP36.28■■■■□ 3.4
CHRNA7-232ENST00000637971 AQRO60306 1485 aaKnown RBP eCLIP36.2■■■■□ 3.39
CHRNA7-232ENST00000637971 CHD1O14646 1710 aa36.17■■■■□ 3.38
CHRNA7-232ENST00000637971 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
CHRNA7-232ENST00000637971 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
CHRNA7-232ENST00000637971 CUX1P39880 1505 aa36.11■■■■□ 3.37
CHRNA7-232ENST00000637971 RIMBP3CA6NJZ7 1639 aa36.11■■■■□ 3.37
CHRNA7-232ENST00000637971 RIMBP3BA6NNM3 1639 aa36.11■■■■□ 3.37
CHRNA7-232ENST00000637971 RIMBP3Q9UFD9 1639 aa36.11■■■■□ 3.37
CHRNA7-232ENST00000637971 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
CHRNA7-232ENST00000637971 SOGA1O94964 1423 aa36.06■■■■□ 3.36
CHRNA7-232ENST00000637971 TDRD9Q8NDG6 1382 aaKnown RBP35.99■■■■□ 3.35
CHRNA7-232ENST00000637971 ARHGEF11O15085 1522 aa35.95■■■■□ 3.35
CHRNA7-232ENST00000637971 WDR97A6NE52 1622 aa35.93■■■■□ 3.34
CHRNA7-232ENST00000637971 FBLN2P98095 1184 aa35.89■■■■□ 3.34
CHRNA7-232ENST00000637971 SNAPC4Q5SXM2 1469 aa35.88■■■■□ 3.33
CHRNA7-232ENST00000637971 PBRM1Q86U86 1689 aa35.8■■■■□ 3.32
CHRNA7-232ENST00000637971 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
CHRNA7-232ENST00000637971 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
CHRNA7-232ENST00000637971 ABCA5Q8WWZ7 1642 aa35.67■■■■□ 3.3
CHRNA7-232ENST00000637971 GAPVD1Q14C86 1478 aa35.65■■■■□ 3.3
CHRNA7-232ENST00000637971 ABCA10Q8WWZ4 1543 aa35.65■■■■□ 3.3
CHRNA7-232ENST00000637971 CLASP1Q7Z460 1538 aa35.64■■■■□ 3.3
CHRNA7-232ENST00000637971 ARAP1Q96P48 1450 aa35.63■■■■□ 3.29
CHRNA7-232ENST00000637971 SYNJ1O43426 1573 aa35.62■■■■□ 3.29
CHRNA7-232ENST00000637971 BIVM-ERCC5R4GMW8 1640 aa35.62■■■■□ 3.29
CHRNA7-232ENST00000637971 CHMP7Q8WUX9 453 aaPredicted RBP35.61■■■■□ 3.29
CHRNA7-232ENST00000637971 SYNJ2O15056 1496 aa35.61■■■■□ 3.29
CHRNA7-232ENST00000637971 CYB5RLQ6IPT4 315 aa35.6■■■■□ 3.29
CHRNA7-232ENST00000637971 TOP2BQ02880 1626 aa35.58■■■■□ 3.29
CHRNA7-232ENST00000637971 WRNQ14191 1432 aaPredicted RBP eCLIP35.52■■■■□ 3.28
CHRNA7-232ENST00000637971 ADAMTS12P58397 1594 aa35.4■■■■□ 3.26
CHRNA7-232ENST00000637971 GRIN2AQ12879 1464 aa35.32■■■■□ 3.24
CHRNA7-232ENST00000637971 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
CHRNA7-232ENST00000637971 ERICH3Q5RHP9 1530 aa35.21■■■■□ 3.23
CHRNA7-232ENST00000637971 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
CHRNA7-232ENST00000637971 ERCC6L2Q5T890 1561 aa35.16■■■■□ 3.22
CHRNA7-232ENST00000637971 TRHP20396 242 aaPredicted RBP35.16■■■■□ 3.22
CHRNA7-232ENST00000637971 NUP160Q12769 1436 aa35.15■■■■□ 3.22
CHRNA7-232ENST00000637971 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
CHRNA7-232ENST00000637971 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
CHRNA7-232ENST00000637971 PRG4Q92954 1404 aaPredicted RBP34.81■■■■□ 3.16
CHRNA7-232ENST00000637971 CUL7Q14999 1698 aa34.81■■■■□ 3.16
CHRNA7-232ENST00000637971 KIF27Q86VH2 1401 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms