RNA–Protein interactions for RNA: ENST00000637920.1

SMIM29-210, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-210ENST00000637920 NISCHQ9Y2I1 1504 aa45.89■■■■■ 4.94
SMIM29-210ENST00000637920 CCDC180Q9P1Z9 1646 aa41.09■■■■■ 4.17
SMIM29-210ENST00000637920 ABCC9O60706 1549 aa40.39■■■■■ 4.06
SMIM29-210ENST00000637920 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.8
SMIM29-210ENST00000637920 NACADO15069 1562 aa38.68■■■■□ 3.78
SMIM29-210ENST00000637920 MYO15BQ96JP2 1530 aa38.39■■■■□ 3.74
SMIM29-210ENST00000637920 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
SMIM29-210ENST00000637920 ZCCHC6Q5VYS8 1495 aaKnown RBP38.18■■■■□ 3.7
SMIM29-210ENST00000637920 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
SMIM29-210ENST00000637920 UNC13AQ9UPW8 1703 aa37.9■■■■□ 3.66
SMIM29-210ENST00000637920 BICRAQ9NZM4 1560 aa37.61■■■■□ 3.61
SMIM29-210ENST00000637920 PABPN1Q86U42 306 aaKnown RBP eCLIP37.58■■■■□ 3.61
SMIM29-210ENST00000637920 SHROOM4Q9ULL8 1493 aa37.35■■■■□ 3.57
SMIM29-210ENST00000637920 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
SMIM29-210ENST00000637920 SCRIBQ14160 1630 aa37.32■■■■□ 3.56
SMIM29-210ENST00000637920 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
SMIM29-210ENST00000637920 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
SMIM29-210ENST00000637920 CECR2Q9BXF3 1484 aa36.4■■■■□ 3.42
SMIM29-210ENST00000637920 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
SMIM29-210ENST00000637920 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
SMIM29-210ENST00000637920 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
SMIM29-210ENST00000637920 ATAD2BQ9ULI0 1458 aa35.59■■■■□ 3.29
SMIM29-210ENST00000637920 SMARCA2P51531 1590 aa35.59■■■■□ 3.29
SMIM29-210ENST00000637920 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
SMIM29-210ENST00000637920 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
SMIM29-210ENST00000637920 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
SMIM29-210ENST00000637920 BAZ1BQ9UIG0 1483 aaKnown RBP35.29■■■■□ 3.24
SMIM29-210ENST00000637920 WIZO95785 1651 aa34.91■■■■□ 3.18
SMIM29-210ENST00000637920 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
SMIM29-210ENST00000637920 NESP48681 1621 aa34.83■■■■□ 3.17
SMIM29-210ENST00000637920 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
SMIM29-210ENST00000637920 CUX2O14529 1486 aa34.77■■■■□ 3.16
SMIM29-210ENST00000637920 RSF1Q96T23 1441 aaPredicted RBP34.75■■■■□ 3.15
SMIM29-210ENST00000637920 TOP2AP11388 1531 aaKnown RBP34.59■■■■□ 3.13
SMIM29-210ENST00000637920 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
SMIM29-210ENST00000637920 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
SMIM29-210ENST00000637920 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
SMIM29-210ENST00000637920 KIF21AQ7Z4S6 1674 aa34.49■■■■□ 3.11
SMIM29-210ENST00000637920 CFTRP13569 1480 aa34.31■■■■□ 3.08
SMIM29-210ENST00000637920 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
SMIM29-210ENST00000637920 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.06
SMIM29-210ENST00000637920 WDR62O43379 1518 aa34.18■■■■□ 3.06
SMIM29-210ENST00000637920 FANCD2Q9BXW9 1451 aa34.17■■■■□ 3.06
SMIM29-210ENST00000637920 CCDC88BA6NC98 1476 aa34.1■■■■□ 3.05
SMIM29-210ENST00000637920 PRDM2Q13029 1718 aa34.1■■■■□ 3.05
SMIM29-210ENST00000637920 DNAJC5Q9H3Z4 198 aa34.04■■■■□ 3.04
SMIM29-210ENST00000637920 URB2Q14146 1524 aaKnown RBP33.84■■■■□ 3.01
SMIM29-210ENST00000637920 ABCC8Q09428 1581 aa33.62■■■□□ 2.97
SMIM29-210ENST00000637920 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
SMIM29-210ENST00000637920 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
SMIM29-210ENST00000637920 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
SMIM29-210ENST00000637920 SUPT5HO00267 1087 aaKnown RBP33.39■■■□□ 2.94
SMIM29-210ENST00000637920 ZNF608Q9ULD9 1512 aaPredicted RBP33.31■■■□□ 2.92
SMIM29-210ENST00000637920 POLA1P09884 1462 aaPredicted RBP33.28■■■□□ 2.92
SMIM29-210ENST00000637920 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
SMIM29-210ENST00000637920 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.91
SMIM29-210ENST00000637920 CUX1P39880 1505 aa33.17■■■□□ 2.9
SMIM29-210ENST00000637920 FGD5Q6ZNL6 1462 aa33.12■■■□□ 2.89
SMIM29-210ENST00000637920 WDR97A6NE52 1622 aa33.12■■■□□ 2.89
SMIM29-210ENST00000637920 OSCARQ8IYS5 282 aa33.11■■■□□ 2.89
SMIM29-210ENST00000637920 SOGA1O94964 1423 aa33.08■■■□□ 2.89
SMIM29-210ENST00000637920 RAD54L2Q9Y4B4 1467 aa33.06■■■□□ 2.88
SMIM29-210ENST00000637920 AQRO60306 1485 aaKnown RBP eCLIP33.05■■■□□ 2.882e-7■■■■■ 56.2
SMIM29-210ENST00000637920 TDRD9Q8NDG6 1382 aaKnown RBP32.9■■■□□ 2.86
SMIM29-210ENST00000637920 CHD1O14646 1710 aa32.88■■■□□ 2.85
SMIM29-210ENST00000637920 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
SMIM29-210ENST00000637920 TOP2BQ02880 1626 aa32.83■■■□□ 2.85
SMIM29-210ENST00000637920 ABCA10Q8WWZ4 1543 aa32.82■■■□□ 2.85
SMIM29-210ENST00000637920 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
SMIM29-210ENST00000637920 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
SMIM29-210ENST00000637920 WRNQ14191 1432 aaPredicted RBP eCLIP32.8■■■□□ 2.84
SMIM29-210ENST00000637920 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
SMIM29-210ENST00000637920 ABCA5Q8WWZ7 1642 aa32.76■■■□□ 2.83
SMIM29-210ENST00000637920 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
SMIM29-210ENST00000637920 PBRM1Q86U86 1689 aa32.74■■■□□ 2.83
SMIM29-210ENST00000637920 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
SMIM29-210ENST00000637920 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
SMIM29-210ENST00000637920 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
SMIM29-210ENST00000637920 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
SMIM29-210ENST00000637920 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
SMIM29-210ENST00000637920 SYNJ2O15056 1496 aa32.66■■■□□ 2.82
SMIM29-210ENST00000637920 FBLN2P98095 1184 aa32.65■■■□□ 2.82
SMIM29-210ENST00000637920 TRIM41Q8WV44 630 aa32.65■■■□□ 2.82
SMIM29-210ENST00000637920 CHMP7Q8WUX9 453 aaPredicted RBP32.56■■■□□ 2.8
SMIM29-210ENST00000637920 CLASP1Q7Z460 1538 aa32.56■■■□□ 2.8
SMIM29-210ENST00000637920 ADAMTS12P58397 1594 aa32.47■■■□□ 2.79
SMIM29-210ENST00000637920 ERICH3Q5RHP9 1530 aa32.45■■■□□ 2.78
SMIM29-210ENST00000637920 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
SMIM29-210ENST00000637920 ARAP1Q96P48 1450 aa32.35■■■□□ 2.77
SMIM29-210ENST00000637920 FHAD1B1AJZ9 1412 aa32.35■■■□□ 2.77
SMIM29-210ENST00000637920 NUP160Q12769 1436 aa32.27■■■□□ 2.76
SMIM29-210ENST00000637920 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
SMIM29-210ENST00000637920 CYB5RLQ6IPT4 315 aa32.23■■■□□ 2.75
SMIM29-210ENST00000637920 KIF27Q86VH2 1401 aa32.16■■■□□ 2.74
SMIM29-210ENST00000637920 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
SMIM29-210ENST00000637920 CUL7Q14999 1698 aa32.1■■■□□ 2.73
SMIM29-210ENST00000637920 IGF1RP08069 1367 aa32.02■■■□□ 2.72
SMIM29-210ENST00000637920 RUSC2Q8N2Y8 1516 aa32.01■■■□□ 2.72
SMIM29-210ENST00000637920 ERCC6L2Q5T890 1561 aa31.98■■■□□ 2.71
SMIM29-210ENST00000637920 KIAA0586Q9BVV6 1533 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms