RNA–Protein interactions for RNA: ENST00000637649.1

CHRNA7-230, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-230ENST00000637649 NISCHQ9Y2I1 1504 aa33.11■■■□□ 2.89
CHRNA7-230ENST00000637649 ABCC9O60706 1549 aa30.5■■■□□ 2.47
CHRNA7-230ENST00000637649 CCDC180Q9P1Z9 1646 aa29.86■■■□□ 2.37
CHRNA7-230ENST00000637649 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
CHRNA7-230ENST00000637649 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
CHRNA7-230ENST00000637649 PABPN1Q86U42 306 aaKnown RBP eCLIP28.37■■■□□ 2.13
CHRNA7-230ENST00000637649 NACADO15069 1562 aa28.37■■■□□ 2.13
CHRNA7-230ENST00000637649 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
CHRNA7-230ENST00000637649 UNC13AQ9UPW8 1703 aa28.11■■■□□ 2.09
CHRNA7-230ENST00000637649 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
CHRNA7-230ENST00000637649 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
CHRNA7-230ENST00000637649 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
CHRNA7-230ENST00000637649 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
CHRNA7-230ENST00000637649 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
CHRNA7-230ENST00000637649 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
CHRNA7-230ENST00000637649 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
CHRNA7-230ENST00000637649 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.96
CHRNA7-230ENST00000637649 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
CHRNA7-230ENST00000637649 DNAJC5Q9H3Z4 198 aa26.99■■□□□ 1.91
CHRNA7-230ENST00000637649 CUX2O14529 1486 aa26.37■■□□□ 1.81
CHRNA7-230ENST00000637649 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
CHRNA7-230ENST00000637649 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
CHRNA7-230ENST00000637649 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
CHRNA7-230ENST00000637649 NESP48681 1621 aa26.06■■□□□ 1.76
CHRNA7-230ENST00000637649 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
CHRNA7-230ENST00000637649 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
CHRNA7-230ENST00000637649 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
CHRNA7-230ENST00000637649 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
CHRNA7-230ENST00000637649 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
CHRNA7-230ENST00000637649 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
CHRNA7-230ENST00000637649 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
CHRNA7-230ENST00000637649 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
CHRNA7-230ENST00000637649 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
CHRNA7-230ENST00000637649 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
CHRNA7-230ENST00000637649 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
CHRNA7-230ENST00000637649 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
CHRNA7-230ENST00000637649 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
CHRNA7-230ENST00000637649 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
CHRNA7-230ENST00000637649 WDR62O43379 1518 aa25.33■■□□□ 1.65
CHRNA7-230ENST00000637649 WIZO95785 1651 aa25.23■■□□□ 1.63
CHRNA7-230ENST00000637649 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
CHRNA7-230ENST00000637649 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
CHRNA7-230ENST00000637649 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
CHRNA7-230ENST00000637649 CFTRP13569 1480 aa25■■□□□ 1.59
CHRNA7-230ENST00000637649 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
CHRNA7-230ENST00000637649 RIMBP3CA6NJZ7 1639 aa24.89■■□□□ 1.57
CHRNA7-230ENST00000637649 RIMBP3BA6NNM3 1639 aa24.89■■□□□ 1.57
CHRNA7-230ENST00000637649 RIMBP3Q9UFD9 1639 aa24.89■■□□□ 1.57
CHRNA7-230ENST00000637649 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
CHRNA7-230ENST00000637649 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
CHRNA7-230ENST00000637649 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
CHRNA7-230ENST00000637649 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
CHRNA7-230ENST00000637649 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
CHRNA7-230ENST00000637649 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
CHRNA7-230ENST00000637649 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
CHRNA7-230ENST00000637649 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
CHRNA7-230ENST00000637649 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
CHRNA7-230ENST00000637649 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
CHRNA7-230ENST00000637649 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
CHRNA7-230ENST00000637649 CHD1O14646 1710 aa24.53■■□□□ 1.52
CHRNA7-230ENST00000637649 FBLN2P98095 1184 aa24.53■■□□□ 1.52
CHRNA7-230ENST00000637649 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
CHRNA7-230ENST00000637649 ARAP1Q96P48 1450 aa24.47■■□□□ 1.51
CHRNA7-230ENST00000637649 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
CHRNA7-230ENST00000637649 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
CHRNA7-230ENST00000637649 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
CHRNA7-230ENST00000637649 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
CHRNA7-230ENST00000637649 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
CHRNA7-230ENST00000637649 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
CHRNA7-230ENST00000637649 SOGA1O94964 1423 aa24.24■■□□□ 1.47
CHRNA7-230ENST00000637649 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-230ENST00000637649 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
CHRNA7-230ENST00000637649 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
CHRNA7-230ENST00000637649 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
CHRNA7-230ENST00000637649 SYNJ1O43426 1573 aa24.13■■□□□ 1.45
CHRNA7-230ENST00000637649 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
CHRNA7-230ENST00000637649 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
CHRNA7-230ENST00000637649 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
CHRNA7-230ENST00000637649 WDR97A6NE52 1622 aa24.04■■□□□ 1.44
CHRNA7-230ENST00000637649 CUX1P39880 1505 aa24.03■■□□□ 1.44
CHRNA7-230ENST00000637649 SYNJ2O15056 1496 aa24.02■■□□□ 1.44
CHRNA7-230ENST00000637649 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
CHRNA7-230ENST00000637649 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
CHRNA7-230ENST00000637649 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
CHRNA7-230ENST00000637649 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
CHRNA7-230ENST00000637649 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
CHRNA7-230ENST00000637649 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CHRNA7-230ENST00000637649 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
CHRNA7-230ENST00000637649 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
CHRNA7-230ENST00000637649 NUP160Q12769 1436 aa23.66■■□□□ 1.38
CHRNA7-230ENST00000637649 KIF13AQ9H1H9 1805 aa23.62■■□□□ 1.37
CHRNA7-230ENST00000637649 WRNQ14191 1432 aaPredicted RBP eCLIP23.61■■□□□ 1.37
CHRNA7-230ENST00000637649 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
CHRNA7-230ENST00000637649 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
CHRNA7-230ENST00000637649 PRG4Q92954 1404 aaPredicted RBP23.53■■□□□ 1.36
CHRNA7-230ENST00000637649 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
CHRNA7-230ENST00000637649 FAM69CQ0P6D2 419 aa23.5■■□□□ 1.35
CHRNA7-230ENST00000637649 JPH4Q96JJ6 628 aa23.48■■□□□ 1.35
CHRNA7-230ENST00000637649 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
CHRNA7-230ENST00000637649 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms