RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
CLN8-214ENST00000637594 ABCC9O60706 1549 aa19.97■□□□□ 0.79
CLN8-214ENST00000637594 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
CLN8-214ENST00000637594 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
CLN8-214ENST00000637594 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
CLN8-214ENST00000637594 NACADO15069 1562 aa18.89■□□□□ 0.62
CLN8-214ENST00000637594 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
CLN8-214ENST00000637594 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
CLN8-214ENST00000637594 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
CLN8-214ENST00000637594 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
CLN8-214ENST00000637594 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
CLN8-214ENST00000637594 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
CLN8-214ENST00000637594 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
CLN8-214ENST00000637594 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
CLN8-214ENST00000637594 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
CLN8-214ENST00000637594 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
CLN8-214ENST00000637594 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
CLN8-214ENST00000637594 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
CLN8-214ENST00000637594 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
CLN8-214ENST00000637594 DNAJC5Q9H3Z4 198 aa17.48■□□□□ 0.39
CLN8-214ENST00000637594 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
CLN8-214ENST00000637594 CUX2O14529 1486 aa17.31■□□□□ 0.36
CLN8-214ENST00000637594 SMARCA2P51531 1590 aa17.31■□□□□ 0.36
CLN8-214ENST00000637594 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
CLN8-214ENST00000637594 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
CLN8-214ENST00000637594 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
CLN8-214ENST00000637594 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
CLN8-214ENST00000637594 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
CLN8-214ENST00000637594 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
CLN8-214ENST00000637594 NESP48681 1621 aa17.14■□□□□ 0.33
CLN8-214ENST00000637594 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
CLN8-214ENST00000637594 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
CLN8-214ENST00000637594 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
CLN8-214ENST00000637594 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
CLN8-214ENST00000637594 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
CLN8-214ENST00000637594 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
CLN8-214ENST00000637594 WIZO95785 1651 aa16.81■□□□□ 0.28
CLN8-214ENST00000637594 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
CLN8-214ENST00000637594 WDR62O43379 1518 aa16.75■□□□□ 0.27
CLN8-214ENST00000637594 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
CLN8-214ENST00000637594 CFTRP13569 1480 aa16.73■□□□□ 0.27
CLN8-214ENST00000637594 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
CLN8-214ENST00000637594 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
CLN8-214ENST00000637594 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
CLN8-214ENST00000637594 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
CLN8-214ENST00000637594 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
CLN8-214ENST00000637594 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
CLN8-214ENST00000637594 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
CLN8-214ENST00000637594 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
CLN8-214ENST00000637594 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
CLN8-214ENST00000637594 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
CLN8-214ENST00000637594 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
CLN8-214ENST00000637594 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
CLN8-214ENST00000637594 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
CLN8-214ENST00000637594 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
CLN8-214ENST00000637594 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
CLN8-214ENST00000637594 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
CLN8-214ENST00000637594 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLN8-214ENST00000637594 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
CLN8-214ENST00000637594 EIF4G3O43432 1585 aaKnown RBP16.2■□□□□ 0.18
CLN8-214ENST00000637594 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
CLN8-214ENST00000637594 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
CLN8-214ENST00000637594 SOGA1O94964 1423 aa16.16■□□□□ 0.18
CLN8-214ENST00000637594 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
CLN8-214ENST00000637594 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
CLN8-214ENST00000637594 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
CLN8-214ENST00000637594 FBLN2P98095 1184 aa16.11■□□□□ 0.17
CLN8-214ENST00000637594 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
CLN8-214ENST00000637594 CHD1O14646 1710 aa16.06■□□□□ 0.16
CLN8-214ENST00000637594 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
CLN8-214ENST00000637594 CUX1P39880 1505 aa16.04■□□□□ 0.16
CLN8-214ENST00000637594 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
CLN8-214ENST00000637594 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
CLN8-214ENST00000637594 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.15
CLN8-214ENST00000637594 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
CLN8-214ENST00000637594 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
CLN8-214ENST00000637594 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
CLN8-214ENST00000637594 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
CLN8-214ENST00000637594 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
CLN8-214ENST00000637594 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
CLN8-214ENST00000637594 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
CLN8-214ENST00000637594 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
CLN8-214ENST00000637594 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
CLN8-214ENST00000637594 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
CLN8-214ENST00000637594 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
CLN8-214ENST00000637594 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
CLN8-214ENST00000637594 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
CLN8-214ENST00000637594 NUP160Q12769 1436 aa15.77■□□□□ 0.12
CLN8-214ENST00000637594 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
CLN8-214ENST00000637594 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
CLN8-214ENST00000637594 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
CLN8-214ENST00000637594 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
CLN8-214ENST00000637594 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
CLN8-214ENST00000637594 CEP170Q5SW79 1584 aa15.69■□□□□ 0.1
CLN8-214ENST00000637594 ERCC6L2Q5T890 1561 aa15.67■□□□□ 0.1
CLN8-214ENST00000637594 SHROOM2Q13796 1616 aa15.66■□□□□ 0.1
CLN8-214ENST00000637594 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
CLN8-214ENST00000637594 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
CLN8-214ENST00000637594 IGF1RP08069 1367 aa15.56■□□□□ 0.08
CLN8-214ENST00000637594 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms