RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 NISCHQ9Y2I1 1504 aa56.69■■■■■ 6.66
CHRNA7-229ENST00000637552 CCDC180Q9P1Z9 1646 aa50.8■■■■■ 5.72
CHRNA7-229ENST00000637552 ABCC9O60706 1549 aa50.52■■■■■ 5.68
CHRNA7-229ENST00000637552 RB1CC1Q8TDY2 1594 aa48.23■■■■■ 5.31
CHRNA7-229ENST00000637552 NACADO15069 1562 aa47.94■■■■■ 5.26
CHRNA7-229ENST00000637552 DCAF8L2P0C7V8 631 aa47.76■■■■■ 5.24
CHRNA7-229ENST00000637552 MYO15BQ96JP2 1530 aa47.35■■■■■ 5.17
CHRNA7-229ENST00000637552 UNC13AQ9UPW8 1703 aa47.1■■■■■ 5.13
CHRNA7-229ENST00000637552 ZCCHC6Q5VYS8 1495 aaKnown RBP47.05■■■■■ 5.12
CHRNA7-229ENST00000637552 PABPN1Q86U42 306 aaKnown RBP eCLIP47.04■■■■■ 5.12
CHRNA7-229ENST00000637552 DNAJC5BQ9UF47 199 aa47.04■■■■■ 5.12
CHRNA7-229ENST00000637552 DCAF1Q9Y4B6 1507 aa46.84■■■■■ 5.09
CHRNA7-229ENST00000637552 BICRAQ9NZM4 1560 aa46.74■■■■■ 5.07
CHRNA7-229ENST00000637552 SCRIBQ14160 1630 aa46.31■■■■■ 5
CHRNA7-229ENST00000637552 SHROOM4Q9ULL8 1493 aa46.21■■■■■ 4.99
CHRNA7-229ENST00000637552 CC2D2AQ9P2K1 1620 aa45.64■■■■■ 4.9
CHRNA7-229ENST00000637552 EIF4G1Q04637 1599 aaKnown RBP45.62■■■■■ 4.89
CHRNA7-229ENST00000637552 CECR2Q9BXF3 1484 aa45.49■■■■■ 4.87
CHRNA7-229ENST00000637552 NCAPD3P42695 1498 aa44.21■■■■■ 4.67
CHRNA7-229ENST00000637552 SMARCA4P51532 1647 aa44.18■■■■■ 4.66
CHRNA7-229ENST00000637552 ATAD2BQ9ULI0 1458 aa44.13■■■■■ 4.65
CHRNA7-229ENST00000637552 SMARCA2P51531 1590 aa44.07■■■■■ 4.65
CHRNA7-229ENST00000637552 BAZ1AQ9NRL2 1556 aaPredicted RBP44.02■■■■■ 4.64
CHRNA7-229ENST00000637552 HMGXB3Q12766 1538 aa43.96■■■■■ 4.63
CHRNA7-229ENST00000637552 BAZ1BQ9UIG0 1483 aaKnown RBP43.76■■■■■ 4.6
CHRNA7-229ENST00000637552 PEG3Q9GZU2 1588 aa43.73■■■■■ 4.59
CHRNA7-229ENST00000637552 MROH2BQ7Z745 1585 aa43.67■■■■■ 4.58
CHRNA7-229ENST00000637552 ERCC6Q03468 1493 aa43.65■■■■■ 4.58
CHRNA7-229ENST00000637552 CUX2O14529 1486 aa43.45■■■■■ 4.55
CHRNA7-229ENST00000637552 NESP48681 1621 aa43.44■■■■■ 4.55
CHRNA7-229ENST00000637552 LAMC3Q9Y6N6 1575 aa43.23■■■■■ 4.51
CHRNA7-229ENST00000637552 WIZO95785 1651 aa43.17■■■■■ 4.5
CHRNA7-229ENST00000637552 DNAJC5Q9H3Z4 198 aa43.06■■■■■ 4.48
CHRNA7-229ENST00000637552 THOC2Q8NI27 1593 aaKnown RBP42.98■■■■■ 4.47
CHRNA7-229ENST00000637552 PDS5BQ9NTI5 1447 aa42.97■■■■■ 4.47
CHRNA7-229ENST00000637552 KIF21AQ7Z4S6 1674 aa42.93■■■■■ 4.46
CHRNA7-229ENST00000637552 CADPSQ9ULU8 1353 aa42.9■■■■■ 4.46
CHRNA7-229ENST00000637552 RSF1Q96T23 1441 aaPredicted RBP42.85■■■■■ 4.45
CHRNA7-229ENST00000637552 TOP2AP11388 1531 aaKnown RBP42.67■■■■■ 4.42
CHRNA7-229ENST00000637552 MRC2Q9UBG0 1479 aa42.58■■■■■ 4.41
CHRNA7-229ENST00000637552 CEP164Q9UPV0 1460 aa42.49■■■■■ 4.39
CHRNA7-229ENST00000637552 CFTRP13569 1480 aa42.46■■■■■ 4.39
CHRNA7-229ENST00000637552 WDR62O43379 1518 aa42.46■■■■■ 4.39
CHRNA7-229ENST00000637552 FANCD2Q9BXW9 1451 aa42.43■■■■■ 4.38
CHRNA7-229ENST00000637552 CCDC88BA6NC98 1476 aa42.15■■■■■ 4.34
CHRNA7-229ENST00000637552 PRDM2Q13029 1718 aa42.13■■■■■ 4.33
CHRNA7-229ENST00000637552 URB2Q14146 1524 aaKnown RBP42.05■■■■■ 4.32
CHRNA7-229ENST00000637552 TOPBP1Q92547 1522 aa41.66■■■■■ 4.26
CHRNA7-229ENST00000637552 ABCC8Q09428 1581 aa41.61■■■■■ 4.25
CHRNA7-229ENST00000637552 IFT140Q96RY7 1462 aa41.6■■■■■ 4.25
CHRNA7-229ENST00000637552 DNMBPQ6XZF7 1577 aa41.55■■■■■ 4.24
CHRNA7-229ENST00000637552 ZNF608Q9ULD9 1512 aaPredicted RBP41.49■■■■■ 4.23
CHRNA7-229ENST00000637552 OSCARQ8IYS5 282 aa41.48■■■■■ 4.23
CHRNA7-229ENST00000637552 TRIM41Q8WV44 630 aa41.35■■■■■ 4.21
CHRNA7-229ENST00000637552 EIF4G3O43432 1585 aaKnown RBP41.32■■■■■ 4.2
CHRNA7-229ENST00000637552 TARBP1Q13395 1621 aaKnown RBP41.26■■■■■ 4.19
CHRNA7-229ENST00000637552 POLA1P09884 1462 aaPredicted RBP41.25■■■■■ 4.19
CHRNA7-229ENST00000637552 SUPT5HO00267 1087 aaKnown RBP41.2■■■■■ 4.19
CHRNA7-229ENST00000637552 AQRO60306 1485 aaKnown RBP eCLIP41.15■■■■■ 4.18
CHRNA7-229ENST00000637552 RAD54L2Q9Y4B4 1467 aa41.08■■■■■ 4.17
CHRNA7-229ENST00000637552 SOGA1O94964 1423 aa41.06■■■■■ 4.16
CHRNA7-229ENST00000637552 FGD5Q6ZNL6 1462 aa41.04■■■■■ 4.16
CHRNA7-229ENST00000637552 CUX1P39880 1505 aa41.02■■■■■ 4.16
CHRNA7-229ENST00000637552 CHD1O14646 1710 aa40.96■■■■■ 4.15
CHRNA7-229ENST00000637552 TDRD9Q8NDG6 1382 aaKnown RBP40.94■■■■■ 4.14
CHRNA7-229ENST00000637552 RIMBP3CA6NJZ7 1639 aa40.93■■■■■ 4.14
CHRNA7-229ENST00000637552 RIMBP3BA6NNM3 1639 aa40.93■■■■■ 4.14
CHRNA7-229ENST00000637552 RIMBP3Q9UFD9 1639 aa40.93■■■■■ 4.14
CHRNA7-229ENST00000637552 WDR97A6NE52 1622 aa40.89■■■■■ 4.14
CHRNA7-229ENST00000637552 FBLN2P98095 1184 aa40.87■■■■■ 4.13
CHRNA7-229ENST00000637552 ARHGEF11O15085 1522 aa40.83■■■■■ 4.13
CHRNA7-229ENST00000637552 SNAPC4Q5SXM2 1469 aa40.77■■■■■ 4.12
CHRNA7-229ENST00000637552 GRIN2BQ13224 1484 aa40.7■■■■■ 4.11
CHRNA7-229ENST00000637552 MAGI1Q96QZ7 1491 aaPredicted RBP40.68■■■■■ 4.1
CHRNA7-229ENST00000637552 CHMP7Q8WUX9 453 aaPredicted RBP40.6■■■■■ 4.09
CHRNA7-229ENST00000637552 ABCA10Q8WWZ4 1543 aa40.58■■■■■ 4.09
CHRNA7-229ENST00000637552 PBRM1Q86U86 1689 aa40.58■■■■■ 4.09
CHRNA7-229ENST00000637552 GAPVD1Q14C86 1478 aa40.58■■■■■ 4.09
CHRNA7-229ENST00000637552 SYNJ2O15056 1496 aa40.53■■■■■ 4.08
CHRNA7-229ENST00000637552 SYNJ1O43426 1573 aa40.52■■■■■ 4.08
CHRNA7-229ENST00000637552 ABCA5Q8WWZ7 1642 aa40.5■■■■■ 4.07
CHRNA7-229ENST00000637552 CYB5RLQ6IPT4 315 aa40.5■■■■■ 4.07
CHRNA7-229ENST00000637552 WRNQ14191 1432 aaPredicted RBP eCLIP40.49■■■■■ 4.07
CHRNA7-229ENST00000637552 CLASP1Q7Z460 1538 aa40.47■■■■■ 4.07
CHRNA7-229ENST00000637552 TOP2BQ02880 1626 aa40.46■■■■■ 4.07
CHRNA7-229ENST00000637552 BIVM-ERCC5R4GMW8 1640 aa40.46■■■■■ 4.07
CHRNA7-229ENST00000637552 ARAP1Q96P48 1450 aa40.44■■■■■ 4.06
CHRNA7-229ENST00000637552 ADAMTS12P58397 1594 aa40.2■■■■■ 4.03
CHRNA7-229ENST00000637552 GRIN2AQ12879 1464 aa40.17■■■■■ 4.02
CHRNA7-229ENST00000637552 ERICH3Q5RHP9 1530 aa40.09■■■■■ 4.01
CHRNA7-229ENST00000637552 FHAD1B1AJZ9 1412 aa40.08■■■■■ 4.01
CHRNA7-229ENST00000637552 CEP170Q5SW79 1584 aa40.01■■■■□ 3.99
CHRNA7-229ENST00000637552 TRHP20396 242 aaPredicted RBP40■■■■□ 3.99
CHRNA7-229ENST00000637552 NUP160Q12769 1436 aa39.99■■■■□ 3.99
CHRNA7-229ENST00000637552 ERCC6L2Q5T890 1561 aa39.84■■■■□ 3.97
CHRNA7-229ENST00000637552 SHROOM2Q13796 1616 aa39.8■■■■□ 3.96
CHRNA7-229ENST00000637552 KIF27Q86VH2 1401 aa39.69■■■■□ 3.94
CHRNA7-229ENST00000637552 RUSC2Q8N2Y8 1516 aa39.63■■■■□ 3.93
CHRNA7-229ENST00000637552 PRG4Q92954 1404 aaPredicted RBP39.61■■■■□ 3.93
CHRNA7-229ENST00000637552 CUL7Q14999 1698 aa39.59■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms