RNA–Protein interactions for RNA: ENST00000637523.1

LINC00598-214, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,943 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-214ENST00000637523 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.24
LINC00598-214ENST00000637523 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
LINC00598-214ENST00000637523 ABCC9O60706 1549 aa19.96■□□□□ 0.79
LINC00598-214ENST00000637523 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
LINC00598-214ENST00000637523 NACADO15069 1562 aa19.14■□□□□ 0.65
LINC00598-214ENST00000637523 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
LINC00598-214ENST00000637523 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
LINC00598-214ENST00000637523 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
LINC00598-214ENST00000637523 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
LINC00598-214ENST00000637523 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
LINC00598-214ENST00000637523 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00598-214ENST00000637523 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
LINC00598-214ENST00000637523 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
LINC00598-214ENST00000637523 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
LINC00598-214ENST00000637523 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
LINC00598-214ENST00000637523 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
LINC00598-214ENST00000637523 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
LINC00598-214ENST00000637523 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
LINC00598-214ENST00000637523 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
LINC00598-214ENST00000637523 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
LINC00598-214ENST00000637523 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
LINC00598-214ENST00000637523 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
LINC00598-214ENST00000637523 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
LINC00598-214ENST00000637523 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
LINC00598-214ENST00000637523 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
LINC00598-214ENST00000637523 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
LINC00598-214ENST00000637523 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
LINC00598-214ENST00000637523 WIZO95785 1651 aa17.42■□□□□ 0.38
LINC00598-214ENST00000637523 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
LINC00598-214ENST00000637523 NESP48681 1621 aa17.25■□□□□ 0.35
LINC00598-214ENST00000637523 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
LINC00598-214ENST00000637523 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
LINC00598-214ENST00000637523 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
LINC00598-214ENST00000637523 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
LINC00598-214ENST00000637523 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
LINC00598-214ENST00000637523 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
LINC00598-214ENST00000637523 CUX2O14529 1486 aa17.06■□□□□ 0.32
LINC00598-214ENST00000637523 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.31
LINC00598-214ENST00000637523 CFTRP13569 1480 aa17.01■□□□□ 0.31
LINC00598-214ENST00000637523 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
LINC00598-214ENST00000637523 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
LINC00598-214ENST00000637523 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
LINC00598-214ENST00000637523 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
LINC00598-214ENST00000637523 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
LINC00598-214ENST00000637523 WDR62O43379 1518 aa16.86■□□□□ 0.29
LINC00598-214ENST00000637523 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
LINC00598-214ENST00000637523 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.27
LINC00598-214ENST00000637523 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
LINC00598-214ENST00000637523 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
LINC00598-214ENST00000637523 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
LINC00598-214ENST00000637523 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
LINC00598-214ENST00000637523 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
LINC00598-214ENST00000637523 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
LINC00598-214ENST00000637523 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
LINC00598-214ENST00000637523 CUX1P39880 1505 aa16.5■□□□□ 0.23
LINC00598-214ENST00000637523 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
LINC00598-214ENST00000637523 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
LINC00598-214ENST00000637523 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
LINC00598-214ENST00000637523 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
LINC00598-214ENST00000637523 SOGA1O94964 1423 aa16.45■□□□□ 0.22
LINC00598-214ENST00000637523 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
LINC00598-214ENST00000637523 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00598-214ENST00000637523 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
LINC00598-214ENST00000637523 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
LINC00598-214ENST00000637523 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
LINC00598-214ENST00000637523 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
LINC00598-214ENST00000637523 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
LINC00598-214ENST00000637523 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
LINC00598-214ENST00000637523 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
LINC00598-214ENST00000637523 CHD1O14646 1710 aa16.29■□□□□ 0.2
LINC00598-214ENST00000637523 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
LINC00598-214ENST00000637523 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
LINC00598-214ENST00000637523 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
LINC00598-214ENST00000637523 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
LINC00598-214ENST00000637523 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
LINC00598-214ENST00000637523 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
LINC00598-214ENST00000637523 MAGI1Q96QZ7 1491 aaPredicted RBP16.23■□□□□ 0.19
LINC00598-214ENST00000637523 FBLN2P98095 1184 aa16.22■□□□□ 0.19
LINC00598-214ENST00000637523 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
LINC00598-214ENST00000637523 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
LINC00598-214ENST00000637523 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
LINC00598-214ENST00000637523 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
LINC00598-214ENST00000637523 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
LINC00598-214ENST00000637523 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
LINC00598-214ENST00000637523 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
LINC00598-214ENST00000637523 ARHGEF11O15085 1522 aa16.08■□□□□ 0.16
LINC00598-214ENST00000637523 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
LINC00598-214ENST00000637523 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
LINC00598-214ENST00000637523 GRIN2AQ12879 1464 aa16.05■□□□□ 0.16
LINC00598-214ENST00000637523 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
LINC00598-214ENST00000637523 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
LINC00598-214ENST00000637523 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
LINC00598-214ENST00000637523 NUP160Q12769 1436 aa15.98■□□□□ 0.15
LINC00598-214ENST00000637523 IGF1RP08069 1367 aa15.97■□□□□ 0.15
LINC00598-214ENST00000637523 CUL7Q14999 1698 aa15.97■□□□□ 0.15
LINC00598-214ENST00000637523 CYB5RLQ6IPT4 315 aa15.94■□□□□ 0.14
LINC00598-214ENST00000637523 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
LINC00598-214ENST00000637523 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
LINC00598-214ENST00000637523 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
LINC00598-214ENST00000637523 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms